EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000012200 (Gene tree)
Gene ID: 113128580
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 3430 bases
Position: chrOOHQ01000044.1:19415172-19418601
Accession: 113128580
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000018071	EXOSC1	PF10447.9	9.3e-16	1	1
ENSMAMP00000018071	ECR1_N	PF14382.6	1.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000018546	-	717	-	ENSMAMP00000018071	194 (aa)	XP_026159804	UPI000E45F430

Gene Model

Click here to download ENSMAMG00000012200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000012200's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000012200	exosc1	98	80.628	ENSG00000171311	EXOSC1	98	80.628	Homo_sapiens
ENSMAMG00000012200	exosc1	100	98.454	ENSAPOG00000007822	exosc1	100	98.454	Acanthochromis_polyacanthus
ENSMAMG00000012200	exosc1	98	81.152	ENSAMEG00000000129	EXOSC1	98	81.152	Ailuropoda_melanoleuca
ENSMAMG00000012200	exosc1	95	96.757	ENSACIG00000018956	exosc1	91	96.757	Amphilophus_citrinellus
ENSMAMG00000012200	exosc1	100	98.454	ENSAOCG00000010699	exosc1	100	98.454	Amphiprion_ocellaris
ENSMAMG00000012200	exosc1	93	87.222	ENSAPEG00000012690	exosc1	97	87.222	Amphiprion_percula
ENSMAMG00000012200	exosc1	100	97.423	ENSATEG00000018683	exosc1	100	97.423	Anabas_testudineus
ENSMAMG00000012200	exosc1	96	78.075	ENSACAG00000002101	EXOSC1	96	78.075	Anolis_carolinensis
ENSMAMG00000012200	exosc1	98	80.628	ENSANAG00000034669	EXOSC1	98	80.628	Aotus_nancymaae
ENSMAMG00000012200	exosc1	100	97.423	ENSACLG00000021243	exosc1	100	97.423	Astatotilapia_calliptera
ENSMAMG00000012200	exosc1	100	94.330	ENSAMXG00000011116	exosc1	100	94.330	Astyanax_mexicanus
ENSMAMG00000012200	exosc1	98	81.152	ENSBTAG00000012699	EXOSC1	98	81.152	Bos_taurus
ENSMAMG00000012200	exosc1	94	35.602	WBGene00012966	exos-1	92	35.602	Caenorhabditis_elegans
ENSMAMG00000012200	exosc1	98	80.105	ENSCJAG00000016586	EXOSC1	98	80.105	Callithrix_jacchus
ENSMAMG00000012200	exosc1	99	80.208	ENSCAFG00000009068	EXOSC1	93	80.208	Canis_familiaris
ENSMAMG00000012200	exosc1	99	80.208	ENSCAFG00020006002	EXOSC1	93	80.208	Canis_lupus_dingo
ENSMAMG00000012200	exosc1	98	81.152	ENSCHIG00000015253	EXOSC1	98	81.152	Capra_hircus
ENSMAMG00000012200	exosc1	98	79.581	ENSTSYG00000000760	EXOSC1	98	79.581	Carlito_syrichta
ENSMAMG00000012200	exosc1	99	80.208	ENSCPOG00000001173	EXOSC1	98	80.208	Cavia_porcellus
ENSMAMG00000012200	exosc1	99	41.753	ENSCCAG00000023986	EXOSC1	98	41.753	Cebus_capucinus
ENSMAMG00000012200	exosc1	98	80.628	ENSCATG00000034114	EXOSC1	98	80.628	Cercocebus_atys
ENSMAMG00000012200	exosc1	98	80.628	ENSCLAG00000002463	EXOSC1	98	80.628	Chinchilla_lanigera
ENSMAMG00000012200	exosc1	98	80.105	ENSCSAG00000005870	EXOSC1	98	80.105	Chlorocebus_sabaeus
ENSMAMG00000012200	exosc1	95	67.935	ENSCHOG00000006477	EXOSC1	98	67.935	Choloepus_hoffmanni
ENSMAMG00000012200	exosc1	55	67.290	ENSCPBG00000011949	EXOSC1	88	67.290	Chrysemys_picta_bellii
ENSMAMG00000012200	exosc1	99	51.295	ENSCING00000022734	-	92	51.295	Ciona_intestinalis
ENSMAMG00000012200	exosc1	99	54.922	ENSCSAVG00000010865	-	98	54.922	Ciona_savignyi
ENSMAMG00000012200	exosc1	98	80.628	ENSCANG00000034159	EXOSC1	98	80.628	Colobus_angolensis_palliatus
ENSMAMG00000012200	exosc1	98	79.581	ENSCGRG00001000335	Exosc1	98	79.581	Cricetulus_griseus_chok1gshd
ENSMAMG00000012200	exosc1	98	79.581	ENSCGRG00000011602	Exosc1	98	79.581	Cricetulus_griseus_crigri
ENSMAMG00000012200	exosc1	100	82.474	ENSCSEG00000007895	exosc1	97	82.474	Cynoglossus_semilaevis
ENSMAMG00000012200	exosc1	100	89.691	ENSCVAG00000016748	exosc1	100	89.691	Cyprinodon_variegatus
ENSMAMG00000012200	exosc1	100	94.330	ENSDARG00000059841	exosc1	100	94.330	Danio_rerio
ENSMAMG00000012200	exosc1	74	77.241	ENSDNOG00000007983	EXOSC1	98	77.241	Dasypus_novemcinctus
ENSMAMG00000012200	exosc1	98	80.105	ENSDORG00000016528	Exosc1	98	80.105	Dipodomys_ordii
ENSMAMG00000012200	exosc1	95	48.947	FBgn0032346	Csl4	92	48.947	Drosophila_melanogaster
ENSMAMG00000012200	exosc1	98	79.058	ENSETEG00000002469	-	98	79.058	Echinops_telfairi
ENSMAMG00000012200	exosc1	97	67.708	ENSEBUG00000008164	exosc1	96	67.708	Eptatretus_burgeri
ENSMAMG00000012200	exosc1	98	71.728	ENSEASG00005008684	EXOSC1	98	71.728	Equus_asinus_asinus
ENSMAMG00000012200	exosc1	60	56.034	ENSECAG00000010621	EXOSC1	69	56.034	Equus_caballus
ENSMAMG00000012200	exosc1	98	79.581	ENSEEUG00000005647	EXOSC1	98	79.581	Erinaceus_europaeus
ENSMAMG00000012200	exosc1	99	89.848	ENSELUG00000017369	exosc1	87	89.848	Esox_lucius
ENSMAMG00000012200	exosc1	98	81.152	ENSFCAG00000040563	EXOSC1	92	81.152	Felis_catus
ENSMAMG00000012200	exosc1	98	78.010	ENSFALG00000008450	EXOSC1	98	78.010	Ficedula_albicollis
ENSMAMG00000012200	exosc1	98	81.152	ENSFDAG00000000846	EXOSC1	98	81.152	Fukomys_damarensis
ENSMAMG00000012200	exosc1	100	90.206	ENSFHEG00000009154	exosc1	100	90.206	Fundulus_heteroclitus
ENSMAMG00000012200	exosc1	100	94.330	ENSGMOG00000008993	exosc1	100	94.330	Gadus_morhua
ENSMAMG00000012200	exosc1	98	66.492	ENSGALG00000039917	EXOSC1	99	85.517	Gallus_gallus
ENSMAMG00000012200	exosc1	100	90.722	ENSGAFG00000010265	exosc1	95	90.722	Gambusia_affinis
ENSMAMG00000012200	exosc1	100	92.784	ENSGACG00000018936	exosc1	100	92.784	Gasterosteus_aculeatus
ENSMAMG00000012200	exosc1	98	76.963	ENSGAGG00000019192	EXOSC1	98	76.963	Gopherus_agassizii
ENSMAMG00000012200	exosc1	98	69.634	ENSGGOG00000003099	EXOSC1	98	69.634	Gorilla_gorilla
ENSMAMG00000012200	exosc1	100	97.423	ENSHBUG00000017857	exosc1	100	97.423	Haplochromis_burtoni
ENSMAMG00000012200	exosc1	98	80.628	ENSHGLG00000016927	EXOSC1	98	80.628	Heterocephalus_glaber_female
ENSMAMG00000012200	exosc1	98	80.628	ENSHGLG00100012208	EXOSC1	98	80.628	Heterocephalus_glaber_male
ENSMAMG00000012200	exosc1	100	95.361	ENSHCOG00000019882	exosc1	100	95.361	Hippocampus_comes
ENSMAMG00000012200	exosc1	100	92.268	ENSIPUG00000007685	exosc1	100	92.268	Ictalurus_punctatus
ENSMAMG00000012200	exosc1	61	63.866	ENSSTOG00000029860	-	91	63.866	Ictidomys_tridecemlineatus
ENSMAMG00000012200	exosc1	99	79.688	ENSSTOG00000006615	EXOSC1	98	79.688	Ictidomys_tridecemlineatus
ENSMAMG00000012200	exosc1	98	80.628	ENSJJAG00000013311	Exosc1	98	80.628	Jaculus_jaculus
ENSMAMG00000012200	exosc1	100	94.330	ENSKMAG00000001202	exosc1	82	94.330	Kryptolebias_marmoratus
ENSMAMG00000012200	exosc1	100	96.907	ENSLBEG00000011448	exosc1	100	96.907	Labrus_bergylta
ENSMAMG00000012200	exosc1	100	66.500	ENSLOCG00000003776	exosc1	100	66.500	Lepisosteus_oculatus
ENSMAMG00000012200	exosc1	98	80.628	ENSLAFG00000015983	EXOSC1	98	80.628	Loxodonta_africana
ENSMAMG00000012200	exosc1	98	80.628	ENSMFAG00000001493	EXOSC1	98	80.628	Macaca_fascicularis
ENSMAMG00000012200	exosc1	98	80.628	ENSMMUG00000020028	EXOSC1	98	73.846	Macaca_mulatta
ENSMAMG00000012200	exosc1	98	80.628	ENSMNEG00000029816	EXOSC1	98	80.628	Macaca_nemestrina
ENSMAMG00000012200	exosc1	98	74.869	ENSMLEG00000027643	EXOSC1	98	74.869	Mandrillus_leucophaeus
ENSMAMG00000012200	exosc1	100	97.423	ENSMZEG00005007042	exosc1	100	97.423	Maylandia_zebra
ENSMAMG00000012200	exosc1	98	69.634	ENSMAUG00000020462	-	98	69.634	Mesocricetus_auratus
ENSMAMG00000012200	exosc1	99	80.208	ENSMICG00000007664	EXOSC1	91	80.208	Microcebus_murinus
ENSMAMG00000012200	exosc1	98	79.581	ENSMOCG00000006004	-	98	79.581	Microtus_ochrogaster
ENSMAMG00000012200	exosc1	97	74.737	ENSMOCG00000017124	-	97	74.737	Microtus_ochrogaster
ENSMAMG00000012200	exosc1	100	71.649	ENSMMOG00000021403	exosc1	100	71.649	Mola_mola
ENSMAMG00000012200	exosc1	99	80.829	ENSMODG00000004213	EXOSC1	98	80.829	Monodelphis_domestica
ENSMAMG00000012200	exosc1	95	97.297	ENSMALG00000007061	exosc1	93	97.297	Monopterus_albus
ENSMAMG00000012200	exosc1	98	79.058	MGP_CAROLIEiJ_G0022959	Exosc1	98	79.058	Mus_caroli
ENSMAMG00000012200	exosc1	98	79.058	ENSMUSG00000034321	Exosc1	98	79.058	Mus_musculus
ENSMAMG00000012200	exosc1	98	79.581	MGP_PahariEiJ_G0014449	Exosc1	98	79.581	Mus_pahari
ENSMAMG00000012200	exosc1	98	79.058	MGP_SPRETEiJ_G0023880	Exosc1	98	79.058	Mus_spretus
ENSMAMG00000012200	exosc1	98	81.152	ENSMPUG00000017044	EXOSC1	98	81.152	Mustela_putorius_furo
ENSMAMG00000012200	exosc1	98	80.628	ENSMLUG00000009228	EXOSC1	98	80.628	Myotis_lucifugus
ENSMAMG00000012200	exosc1	98	78.010	ENSNGAG00000022033	Exosc1	98	78.010	Nannospalax_galili
ENSMAMG00000012200	exosc1	100	76.289	ENSNBRG00000024007	exosc1	99	76.289	Neolamprologus_brichardi
ENSMAMG00000012200	exosc1	98	80.105	ENSNLEG00000013872	EXOSC1	98	80.105	Nomascus_leucogenys
ENSMAMG00000012200	exosc1	58	72.321	ENSMEUG00000002246	EXOSC1	97	72.321	Notamacropus_eugenii
ENSMAMG00000012200	exosc1	98	79.581	ENSOPRG00000005065	EXOSC1	98	79.581	Ochotona_princeps
ENSMAMG00000012200	exosc1	98	81.152	ENSODEG00000016709	EXOSC1	98	81.152	Octodon_degus
ENSMAMG00000012200	exosc1	100	97.423	ENSONIG00000017683	exosc1	99	97.423	Oreochromis_niloticus
ENSMAMG00000012200	exosc1	59	93.860	ENSOANG00000006563	EXOSC1	98	90.244	Ornithorhynchus_anatinus
ENSMAMG00000012200	exosc1	98	79.167	ENSOCUG00000011898	-	98	79.167	Oryctolagus_cuniculus
ENSMAMG00000012200	exosc1	99	74.479	ENSOCUG00000026461	-	98	74.479	Oryctolagus_cuniculus
ENSMAMG00000012200	exosc1	100	91.795	ENSORLG00000011595	exosc1	100	91.795	Oryzias_latipes
ENSMAMG00000012200	exosc1	100	91.795	ENSORLG00020005831	exosc1	100	91.795	Oryzias_latipes_hni
ENSMAMG00000012200	exosc1	100	91.282	ENSORLG00015004317	exosc1	100	91.282	Oryzias_latipes_hsok
ENSMAMG00000012200	exosc1	100	78.351	ENSOMEG00000013907	exosc1	99	78.351	Oryzias_melastigma
ENSMAMG00000012200	exosc1	98	80.105	ENSOGAG00000016259	EXOSC1	98	80.105	Otolemur_garnettii
ENSMAMG00000012200	exosc1	98	80.628	ENSOARG00000010136	EXOSC1	98	80.628	Ovis_aries
ENSMAMG00000012200	exosc1	98	74.611	ENSPPAG00000039842	EXOSC1	98	74.611	Pan_paniscus
ENSMAMG00000012200	exosc1	98	81.152	ENSPPRG00000023366	EXOSC1	98	81.152	Panthera_pardus
ENSMAMG00000012200	exosc1	98	81.152	ENSPTIG00000017701	EXOSC1	98	81.152	Panthera_tigris_altaica
ENSMAMG00000012200	exosc1	98	80.628	ENSPTRG00000002808	EXOSC1	98	80.628	Pan_troglodytes
ENSMAMG00000012200	exosc1	98	80.628	ENSPANG00000021324	EXOSC1	98	80.628	Papio_anubis
ENSMAMG00000012200	exosc1	100	92.784	ENSPKIG00000016037	exosc1	100	92.784	Paramormyrops_kingsleyae
ENSMAMG00000012200	exosc1	91	66.316	ENSPSIG00000013571	EXOSC1	98	80.165	Pelodiscus_sinensis
ENSMAMG00000012200	exosc1	100	84.021	ENSPMGG00000014002	exosc1	100	84.021	Periophthalmus_magnuspinnatus
ENSMAMG00000012200	exosc1	98	79.581	ENSPEMG00000010710	-	98	79.581	Peromyscus_maniculatus_bairdii
ENSMAMG00000012200	exosc1	96	70.053	ENSPMAG00000000195	exosc1	95	70.053	Petromyzon_marinus
ENSMAMG00000012200	exosc1	99	79.688	ENSPCIG00000002210	EXOSC1	97	79.688	Phascolarctos_cinereus
ENSMAMG00000012200	exosc1	100	89.691	ENSPFOG00000006755	exosc1	95	89.691	Poecilia_formosa
ENSMAMG00000012200	exosc1	100	89.691	ENSPLAG00000005880	exosc1	100	89.691	Poecilia_latipinna
ENSMAMG00000012200	exosc1	100	89.691	ENSPMEG00000015598	exosc1	95	89.691	Poecilia_mexicana
ENSMAMG00000012200	exosc1	100	77.320	ENSPREG00000000405	exosc1	94	77.320	Poecilia_reticulata
ENSMAMG00000012200	exosc1	99	80.208	ENSPPYG00000002531	EXOSC1	98	80.208	Pongo_abelii
ENSMAMG00000012200	exosc1	98	79.581	ENSPCAG00000009135	EXOSC1	98	79.581	Procavia_capensis
ENSMAMG00000012200	exosc1	98	74.346	ENSPCOG00000027539	EXOSC1	98	74.346	Propithecus_coquereli
ENSMAMG00000012200	exosc1	98	80.628	ENSPVAG00000003372	EXOSC1	98	80.628	Pteropus_vampyrus
ENSMAMG00000012200	exosc1	100	97.423	ENSPNYG00000021745	exosc1	100	97.423	Pundamilia_nyererei
ENSMAMG00000012200	exosc1	100	93.299	ENSPNAG00000001944	exosc1	100	93.299	Pygocentrus_nattereri
ENSMAMG00000012200	exosc1	98	79.581	ENSRNOG00000048708	Exosc1	98	79.581	Rattus_norvegicus
ENSMAMG00000012200	exosc1	98	80.628	ENSRBIG00000035618	EXOSC1	98	80.628	Rhinopithecus_bieti
ENSMAMG00000012200	exosc1	98	80.628	ENSRROG00000032589	EXOSC1	91	80.628	Rhinopithecus_roxellana
ENSMAMG00000012200	exosc1	65	37.423	YNL232W	CSL4	55	37.423	Saccharomyces_cerevisiae
ENSMAMG00000012200	exosc1	98	80.628	ENSSBOG00000000359	EXOSC1	98	80.628	Saimiri_boliviensis_boliviensis
ENSMAMG00000012200	exosc1	75	89.116	ENSSHAG00000018219	EXOSC1	100	89.116	Sarcophilus_harrisii
ENSMAMG00000012200	exosc1	100	91.753	ENSSFOG00015009069	exosc1	100	91.753	Scleropages_formosus
ENSMAMG00000012200	exosc1	100	90.722	ENSSFOG00015016289	-	100	90.722	Scleropages_formosus
ENSMAMG00000012200	exosc1	100	97.423	ENSSMAG00000003721	exosc1	100	97.423	Scophthalmus_maximus
ENSMAMG00000012200	exosc1	100	96.392	ENSSDUG00000002993	exosc1	100	96.392	Seriola_dumerili
ENSMAMG00000012200	exosc1	100	96.392	ENSSLDG00000025181	exosc1	100	96.392	Seriola_lalandi_dorsalis
ENSMAMG00000012200	exosc1	98	69.110	ENSSARG00000000162	EXOSC1	98	69.110	Sorex_araneus
ENSMAMG00000012200	exosc1	98	74.869	ENSSPUG00000012263	EXOSC1	98	74.869	Sphenodon_punctatus
ENSMAMG00000012200	exosc1	100	89.175	ENSSPAG00000016792	exosc1	83	89.175	Stegastes_partitus
ENSMAMG00000012200	exosc1	98	80.105	ENSSSCG00000010518	EXOSC1	89	80.105	Sus_scrofa
ENSMAMG00000012200	exosc1	98	77.487	ENSTGUG00000009692	EXOSC1	98	77.487	Taeniopygia_guttata
ENSMAMG00000012200	exosc1	98	83.158	ENSTRUG00000007706	exosc1	98	83.158	Takifugu_rubripes
ENSMAMG00000012200	exosc1	98	82.902	ENSTNIG00000014079	exosc1	97	82.902	Tetraodon_nigroviridis
ENSMAMG00000012200	exosc1	98	74.869	ENSTBEG00000006011	EXOSC1	98	74.869	Tupaia_belangeri
ENSMAMG00000012200	exosc1	94	82.514	ENSTTRG00000009887	EXOSC1	99	82.514	Tursiops_truncatus
ENSMAMG00000012200	exosc1	98	64.921	ENSUAMG00000010266	EXOSC1	98	64.921	Ursus_americanus
ENSMAMG00000012200	exosc1	99	64.583	ENSUMAG00000022002	EXOSC1	98	64.583	Ursus_maritimus
ENSMAMG00000012200	exosc1	98	80.628	ENSVVUG00000023192	EXOSC1	62	80.628	Vulpes_vulpes
ENSMAMG00000012200	exosc1	99	76.684	ENSXETG00000003434	exosc1	99	76.684	Xenopus_tropicalis
ENSMAMG00000012200	exosc1	62	90.909	ENSXCOG00000014499	exosc1	93	90.909	Xiphophorus_couchianus
ENSMAMG00000012200	exosc1	100	77.835	ENSXMAG00000023382	exosc1	94	77.835	Xiphophorus_maculatus