EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000012269 (Gene tree)
Gene ID: 113136661
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 12343 bases
Position: chrOOHQ01000011.1:1307085-1319427
Accession: ZDB-GENE-060810-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000018289	ResIII	PF04851.15	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000018766	-	2646	-	ENSMAMP00000018289	881 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000012269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000012269's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000012269	rad54b	57	34.043	ENSMAMG00000009850	hells	64	34.615
ENSMAMG00000012269	rad54b	57	32.490	ENSMAMG00000012822	chd1l	52	32.490
ENSMAMG00000012269	rad54b	77	42.693	ENSMAMG00000022180	rad54l	97	42.611

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000012269	rad54b	99	55.255	ENSG00000197275	RAD54B	99	55.255	Homo_sapiens
ENSMAMG00000012269	rad54b	82	58.593	ENSG00000265817	FSBP	99	58.593	Homo_sapiens
ENSMAMG00000012269	rad54b	99	55.483	ENSAMEG00000005834	-	99	55.483	Ailuropoda_melanoleuca
ENSMAMG00000012269	rad54b	99	80.990	ENSACIG00000013005	rad54b	100	80.990	Amphilophus_citrinellus
ENSMAMG00000012269	rad54b	99	76.483	ENSAOCG00000008523	rad54b	100	76.589	Amphiprion_ocellaris
ENSMAMG00000012269	rad54b	99	78.198	ENSAPEG00000001673	rad54b	100	78.853	Amphiprion_percula
ENSMAMG00000012269	rad54b	99	85.747	ENSATEG00000001527	rad54b	100	85.747	Anabas_testudineus
ENSMAMG00000012269	rad54b	99	57.559	ENSAPLG00000014366	-	99	57.559	Anas_platyrhynchos
ENSMAMG00000012269	rad54b	90	59.826	ENSACAG00000003671	-	98	59.826	Anolis_carolinensis
ENSMAMG00000012269	rad54b	73	59.816	ENSANAG00000019528	-	99	59.816	Aotus_nancymaae
ENSMAMG00000012269	rad54b	99	82.406	ENSACLG00000007826	rad54b	100	82.406	Astatotilapia_calliptera
ENSMAMG00000012269	rad54b	89	65.327	ENSAMXG00000039985	rad54b	94	65.131	Astyanax_mexicanus
ENSMAMG00000012269	rad54b	99	54.957	ENSBTAG00000000632	RAD54B	99	54.957	Bos_taurus
ENSMAMG00000012269	rad54b	81	35.484	WBGene00013792	Y116A8C.13	86	34.106	Caenorhabditis_elegans
ENSMAMG00000012269	rad54b	99	55.568	ENSCJAG00000000080	-	99	58.378	Callithrix_jacchus
ENSMAMG00000012269	rad54b	99	56.048	ENSCAFG00000009179	RAD54B	99	56.048	Canis_familiaris
ENSMAMG00000012269	rad54b	99	56.156	ENSCAFG00020012084	-	99	56.156	Canis_lupus_dingo
ENSMAMG00000012269	rad54b	99	55.411	ENSCHIG00000008230	-	99	55.411	Capra_hircus
ENSMAMG00000012269	rad54b	99	55.206	ENSTSYG00000013234	-	99	55.206	Carlito_syrichta
ENSMAMG00000012269	rad54b	99	55.275	ENSCPOG00000011643	-	99	55.275	Cavia_porcellus
ENSMAMG00000012269	rad54b	99	55.736	ENSCCAG00000011754	-	99	58.514	Cebus_capucinus
ENSMAMG00000012269	rad54b	99	55.217	ENSCATG00000030661	-	99	58.424	Cercocebus_atys
ENSMAMG00000012269	rad54b	99	55.605	ENSCLAG00000010476	-	99	55.605	Chinchilla_lanigera
ENSMAMG00000012269	rad54b	99	55.217	ENSCSAG00000012712	-	99	55.217	Chlorocebus_sabaeus
ENSMAMG00000012269	rad54b	99	57.143	ENSCPBG00000003204	-	98	58.754	Chrysemys_picta_bellii
ENSMAMG00000012269	rad54b	99	55.217	ENSCANG00000017939	-	99	58.560	Colobus_angolensis_palliatus
ENSMAMG00000012269	rad54b	99	55.469	ENSCGRG00001020184	Rad54b	99	55.469	Cricetulus_griseus_chok1gshd
ENSMAMG00000012269	rad54b	99	54.024	ENSCGRG00000016752	Rad54b	99	54.024	Cricetulus_griseus_crigri
ENSMAMG00000012269	rad54b	99	79.224	ENSCSEG00000001601	rad54b	99	79.224	Cynoglossus_semilaevis
ENSMAMG00000012269	rad54b	99	79.819	ENSCVAG00000009200	rad54b	100	79.819	Cyprinodon_variegatus
ENSMAMG00000012269	rad54b	99	62.077	ENSDARG00000092134	rad54b	99	67.388	Danio_rerio
ENSMAMG00000012269	rad54b	99	55.832	ENSDNOG00000015535	-	99	55.832	Dasypus_novemcinctus
ENSMAMG00000012269	rad54b	99	56.541	ENSDORG00000002492	Rad54b	99	56.763	Dipodomys_ordii
ENSMAMG00000012269	rad54b	86	57.928	ENSETEG00000010605	-	100	57.928	Echinops_telfairi
ENSMAMG00000012269	rad54b	99	46.908	ENSEBUG00000009104	rad54b	98	46.908	Eptatretus_burgeri
ENSMAMG00000012269	rad54b	94	56.738	ENSEASG00005004021	-	94	56.738	Equus_asinus_asinus
ENSMAMG00000012269	rad54b	99	54.644	ENSECAG00000021949	-	99	54.644	Equus_caballus
ENSMAMG00000012269	rad54b	80	51.553	ENSEEUG00000008056	-	72	51.553	Erinaceus_europaeus
ENSMAMG00000012269	rad54b	99	70.095	ENSELUG00000009287	rad54b	100	70.095	Esox_lucius
ENSMAMG00000012269	rad54b	99	55.448	ENSFCAG00000015513	-	99	59.973	Felis_catus
ENSMAMG00000012269	rad54b	99	57.096	ENSFALG00000005467	-	99	57.096	Ficedula_albicollis
ENSMAMG00000012269	rad54b	99	54.989	ENSFDAG00000020541	-	99	54.989	Fukomys_damarensis
ENSMAMG00000012269	rad54b	98	75.744	ENSFHEG00000014382	rad54b	96	75.973	Fundulus_heteroclitus
ENSMAMG00000012269	rad54b	89	78.849	ENSGMOG00000014774	rad54b	99	78.849	Gadus_morhua
ENSMAMG00000012269	rad54b	99	57.775	ENSGALG00000043597	RAD54B	99	57.713	Gallus_gallus
ENSMAMG00000012269	rad54b	99	79.361	ENSGAFG00000007901	rad54b	99	79.361	Gambusia_affinis
ENSMAMG00000012269	rad54b	99	76.432	ENSGACG00000009128	rad54b	99	76.432	Gasterosteus_aculeatus
ENSMAMG00000012269	rad54b	99	57.143	ENSGAGG00000018747	-	99	57.143	Gopherus_agassizii
ENSMAMG00000012269	rad54b	99	55.292	ENSGGOG00000023516	-	99	55.292	Gorilla_gorilla
ENSMAMG00000012269	rad54b	99	78.349	ENSHBUG00000016017	rad54b	99	78.349	Haplochromis_burtoni
ENSMAMG00000012269	rad54b	99	54.350	ENSHGLG00000008263	RAD54B	99	54.350	Heterocephalus_glaber_female
ENSMAMG00000012269	rad54b	99	53.575	ENSHGLG00100008108	-	99	53.575	Heterocephalus_glaber_male
ENSMAMG00000012269	rad54b	99	72.204	ENSHCOG00000004764	rad54b	98	75.436	Hippocampus_comes
ENSMAMG00000012269	rad54b	99	58.910	ENSIPUG00000018531	rad54b	99	59.034	Ictalurus_punctatus
ENSMAMG00000012269	rad54b	99	54.913	ENSSTOG00000010791	-	99	54.913	Ictidomys_tridecemlineatus
ENSMAMG00000012269	rad54b	99	54.447	ENSJJAG00000010314	Rad54b	99	54.447	Jaculus_jaculus
ENSMAMG00000012269	rad54b	99	76.023	ENSKMAG00000004744	rad54b	99	76.196	Kryptolebias_marmoratus
ENSMAMG00000012269	rad54b	85	63.095	ENSLACG00000000859	-	100	63.095	Latimeria_chalumnae
ENSMAMG00000012269	rad54b	99	61.571	ENSLOCG00000010100	rad54b	94	67.037	Lepisosteus_oculatus
ENSMAMG00000012269	rad54b	89	57.625	ENSLAFG00000015315	-	97	57.625	Loxodonta_africana
ENSMAMG00000012269	rad54b	99	54.891	ENSMFAG00000031629	-	99	58.288	Macaca_fascicularis
ENSMAMG00000012269	rad54b	99	54.891	ENSMMUG00000005659	-	99	55.109	Macaca_mulatta
ENSMAMG00000012269	rad54b	99	54.951	ENSMNEG00000016408	-	99	54.951	Macaca_nemestrina
ENSMAMG00000012269	rad54b	99	54.891	ENSMLEG00000006946	-	99	55.109	Mandrillus_leucophaeus
ENSMAMG00000012269	rad54b	94	83.575	ENSMZEG00005005281	rad54b	99	83.575	Maylandia_zebra
ENSMAMG00000012269	rad54b	99	57.313	ENSMGAG00000012024	-	99	57.251	Meleagris_gallopavo
ENSMAMG00000012269	rad54b	99	55.817	ENSMAUG00000013586	Rad54b	99	55.817	Mesocricetus_auratus
ENSMAMG00000012269	rad54b	99	55.580	ENSMICG00000000754	-	99	55.580	Microcebus_murinus
ENSMAMG00000012269	rad54b	99	55.072	ENSMOCG00000020035	Rad54b	99	55.072	Microtus_ochrogaster
ENSMAMG00000012269	rad54b	99	79.484	ENSMMOG00000003394	rad54b	99	79.484	Mola_mola
ENSMAMG00000012269	rad54b	89	58.655	ENSMODG00000007343	-	97	58.655	Monodelphis_domestica
ENSMAMG00000012269	rad54b	73	86.293	ENSMALG00000001520	rad54b	100	86.293	Monopterus_albus
ENSMAMG00000012269	rad54b	99	55.960	MGP_CAROLIEiJ_G0025810	Rad54b	99	56.160	Mus_caroli
ENSMAMG00000012269	rad54b	99	56.049	ENSMUSG00000078773	Rad54b	99	56.049	Mus_musculus
ENSMAMG00000012269	rad54b	99	55.987	MGP_PahariEiJ_G0023933	Rad54b	99	55.987	Mus_pahari
ENSMAMG00000012269	rad54b	99	56.333	MGP_SPRETEiJ_G0026758	Rad54b	99	56.333	Mus_spretus
ENSMAMG00000012269	rad54b	89	59.649	ENSMPUG00000008878	-	97	59.649	Mustela_putorius_furo
ENSMAMG00000012269	rad54b	99	54.486	ENSMLUG00000008953	-	99	54.486	Myotis_lucifugus
ENSMAMG00000012269	rad54b	99	54.863	ENSNGAG00000017537	Rad54b	99	54.863	Nannospalax_galili
ENSMAMG00000012269	rad54b	99	82.520	ENSNBRG00000013394	rad54b	100	82.520	Neolamprologus_brichardi
ENSMAMG00000012269	rad54b	99	55.146	ENSNLEG00000003062	-	99	58.457	Nomascus_leucogenys
ENSMAMG00000012269	rad54b	72	62.626	ENSMEUG00000012426	-	69	62.626	Notamacropus_eugenii
ENSMAMG00000012269	rad54b	99	55.410	ENSODEG00000019564	-	99	55.410	Octodon_degus
ENSMAMG00000012269	rad54b	83	72.727	ENSODEG00000002650	-	97	72.727	Octodon_degus
ENSMAMG00000012269	rad54b	99	79.891	ENSONIG00000006067	rad54b	100	79.891	Oreochromis_niloticus
ENSMAMG00000012269	rad54b	85	59.502	ENSOANG00000011348	-	99	59.502	Ornithorhynchus_anatinus
ENSMAMG00000012269	rad54b	99	54.821	ENSOCUG00000016478	-	99	54.811	Oryctolagus_cuniculus
ENSMAMG00000012269	rad54b	99	73.757	ENSORLG00000008918	rad54b	100	83.692	Oryzias_latipes
ENSMAMG00000012269	rad54b	73	84.000	ENSORLG00020012171	rad54b	100	84.000	Oryzias_latipes_hni
ENSMAMG00000012269	rad54b	99	73.207	ENSORLG00015018536	rad54b	100	72.890	Oryzias_latipes_hsok
ENSMAMG00000012269	rad54b	88	81.783	ENSOMEG00000004345	rad54b	100	81.783	Oryzias_melastigma
ENSMAMG00000012269	rad54b	99	53.030	ENSOGAG00000007854	-	99	53.030	Otolemur_garnettii
ENSMAMG00000012269	rad54b	89	59.527	ENSOARG00000007691	-	97	59.527	Ovis_aries
ENSMAMG00000012269	rad54b	99	54.104	ENSPPAG00000029572	-	99	54.104	Pan_paniscus
ENSMAMG00000012269	rad54b	99	55.340	ENSPPRG00000007571	-	99	59.838	Panthera_pardus
ENSMAMG00000012269	rad54b	82	59.704	ENSPTIG00000012670	-	99	59.704	Panthera_tigris_altaica
ENSMAMG00000012269	rad54b	99	55.184	ENSPTRG00000020427	-	99	58.457	Pan_troglodytes
ENSMAMG00000012269	rad54b	99	55.217	ENSPANG00000019566	-	99	55.217	Papio_anubis
ENSMAMG00000012269	rad54b	99	61.987	ENSPKIG00000014974	rad54b	99	61.987	Paramormyrops_kingsleyae
ENSMAMG00000012269	rad54b	99	56.695	ENSPSIG00000002383	-	95	61.481	Pelodiscus_sinensis
ENSMAMG00000012269	rad54b	99	55.507	ENSPEMG00000012133	Rad54b	99	55.507	Peromyscus_maniculatus_bairdii
ENSMAMG00000012269	rad54b	90	56.328	ENSPMAG00000002916	rad54b	99	56.559	Petromyzon_marinus
ENSMAMG00000012269	rad54b	89	60.330	ENSPCIG00000020151	-	91	60.330	Phascolarctos_cinereus
ENSMAMG00000012269	rad54b	99	75.080	ENSPFOG00000023411	rad54b	99	75.080	Poecilia_formosa
ENSMAMG00000012269	rad54b	99	74.973	ENSPLAG00000010430	rad54b	99	74.973	Poecilia_latipinna
ENSMAMG00000012269	rad54b	99	77.879	ENSPMEG00000016873	rad54b	99	77.879	Poecilia_mexicana
ENSMAMG00000012269	rad54b	99	79.025	ENSPREG00000018443	rad54b	99	79.025	Poecilia_reticulata
ENSMAMG00000012269	rad54b	99	55.146	ENSPPYG00000018750	-	99	55.146	Pongo_abelii
ENSMAMG00000012269	rad54b	99	54.486	ENSPCOG00000026845	-	99	57.973	Propithecus_coquereli
ENSMAMG00000012269	rad54b	84	57.839	ENSPVAG00000000261	-	86	57.839	Pteropus_vampyrus
ENSMAMG00000012269	rad54b	90	82.728	ENSPNYG00000018303	rad54b	97	82.728	Pundamilia_nyererei
ENSMAMG00000012269	rad54b	99	62.018	ENSPNAG00000000295	rad54b	99	62.245	Pygocentrus_nattereri
ENSMAMG00000012269	rad54b	99	55.531	ENSRNOG00000039949	Rad54b	99	55.531	Rattus_norvegicus
ENSMAMG00000012269	rad54b	99	54.329	ENSRBIG00000020419	-	99	54.329	Rhinopithecus_bieti
ENSMAMG00000012269	rad54b	99	54.329	ENSRROG00000039897	-	99	54.329	Rhinopithecus_roxellana
ENSMAMG00000012269	rad54b	85	36.621	YBR073W	RDH54	81	36.298	Saccharomyces_cerevisiae
ENSMAMG00000012269	rad54b	99	55.363	ENSSBOG00000028501	-	99	55.363	Saimiri_boliviensis_boliviensis
ENSMAMG00000012269	rad54b	99	54.545	ENSSHAG00000017038	-	99	54.545	Sarcophilus_harrisii
ENSMAMG00000012269	rad54b	65	70.578	ENSSFOG00015008483	rad54b	88	70.578	Scleropages_formosus
ENSMAMG00000012269	rad54b	99	82.273	ENSSMAG00000018659	rad54b	99	82.159	Scophthalmus_maximus
ENSMAMG00000012269	rad54b	95	86.816	ENSSDUG00000001122	rad54b	90	86.403	Seriola_dumerili
ENSMAMG00000012269	rad54b	99	86.571	ENSSLDG00000013787	rad54b	100	81.456	Seriola_lalandi_dorsalis
ENSMAMG00000012269	rad54b	99	58.333	ENSSPUG00000016497	-	99	58.333	Sphenodon_punctatus
ENSMAMG00000012269	rad54b	99	82.095	ENSSPAG00000012800	rad54b	100	82.095	Stegastes_partitus
ENSMAMG00000012269	rad54b	99	55.628	ENSSSCG00000006101	-	98	58.831	Sus_scrofa
ENSMAMG00000012269	rad54b	99	56.634	ENSTGUG00000011880	-	99	56.634	Taeniopygia_guttata
ENSMAMG00000012269	rad54b	98	79.952	ENSTRUG00000010015	rad54b	90	81.188	Takifugu_rubripes
ENSMAMG00000012269	rad54b	99	51.620	ENSTTRG00000006312	-	99	51.620	Tursiops_truncatus
ENSMAMG00000012269	rad54b	99	55.157	ENSUMAG00000016401	-	99	55.157	Ursus_maritimus
ENSMAMG00000012269	rad54b	89	60.025	ENSVPAG00000003157	-	87	60.025	Vicugna_pacos
ENSMAMG00000012269	rad54b	99	48.415	ENSXETG00000025924	rad54b	99	52.410	Xenopus_tropicalis
ENSMAMG00000012269	rad54b	99	78.369	ENSXMAG00000013141	rad54b	99	78.369	Xiphophorus_maculatus