EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000012386 (Gene tree)
Gene ID: 113124309
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 5530 bases
Position: chrOOHQ01000096.1:20589453-20594982
Accession: 113124309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000018343	Ribosomal_S18	PF01084.20	6.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000018820	-	4151	-	ENSMAMP00000018343	134 (aa)	XP_026152758	UPI000E460FF5

Gene Model

Click here to download ENSMAMG00000012386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000012386's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000012386	mrps18c	100	70.149	ENSAPOG00000019045	mrps18c	100	70.149	Acanthochromis_polyacanthus
ENSMAMG00000012386	mrps18c	69	78.261	ENSACIG00000020253	mrps18c	91	78.261	Amphilophus_citrinellus
ENSMAMG00000012386	mrps18c	100	67.910	ENSAOCG00000014338	mrps18c	100	67.910	Amphiprion_ocellaris
ENSMAMG00000012386	mrps18c	100	67.910	ENSAPEG00000022956	mrps18c	100	67.910	Amphiprion_percula
ENSMAMG00000012386	mrps18c	65	85.057	ENSAPEG00000023068	-	90	78.947	Amphiprion_percula
ENSMAMG00000012386	mrps18c	100	67.164	ENSATEG00000023417	mrps18c	100	67.164	Anabas_testudineus
ENSMAMG00000012386	mrps18c	66	67.045	ENSAPLG00000012544	-	85	67.045	Anas_platyrhynchos
ENSMAMG00000012386	mrps18c	69	83.696	ENSACLG00000010521	mrps18c	90	83.696	Astatotilapia_calliptera
ENSMAMG00000012386	mrps18c	68	71.429	ENSAMXG00000012238	mrps18c	92	71.429	Astyanax_mexicanus
ENSMAMG00000012386	mrps18c	68	69.231	ENSCPBG00000007783	-	56	69.231	Chrysemys_picta_bellii
ENSMAMG00000012386	mrps18c	68	78.022	ENSCSEG00000000711	mrps18c	60	83.077	Cynoglossus_semilaevis
ENSMAMG00000012386	mrps18c	100	60.448	ENSCVAG00000020169	mrps18c	100	60.448	Cyprinodon_variegatus
ENSMAMG00000012386	mrps18c	69	73.118	ENSDARG00000069624	mrps18c	68	73.118	Danio_rerio
ENSMAMG00000012386	mrps18c	100	57.778	ENSELUG00000024603	mrps18c	100	57.778	Esox_lucius
ENSMAMG00000012386	mrps18c	100	61.940	ENSFHEG00000018752	-	100	61.940	Fundulus_heteroclitus
ENSMAMG00000012386	mrps18c	100	61.940	ENSFHEG00000015550	mrps18c	95	61.940	Fundulus_heteroclitus
ENSMAMG00000012386	mrps18c	69	69.565	ENSGALG00000023191	MRPS18C	64	69.565	Gallus_gallus
ENSMAMG00000012386	mrps18c	100	60.448	ENSGAFG00000008048	mrps18c	83	60.448	Gambusia_affinis
ENSMAMG00000012386	mrps18c	68	69.231	ENSGAGG00000015144	-	64	69.231	Gopherus_agassizii
ENSMAMG00000012386	mrps18c	100	68.657	ENSHBUG00000002008	mrps18c	100	68.657	Haplochromis_burtoni
ENSMAMG00000012386	mrps18c	81	69.027	ENSHCOG00000013161	mrps18c	86	69.027	Hippocampus_comes
ENSMAMG00000012386	mrps18c	68	73.626	ENSIPUG00000003783	mrps18c	88	73.626	Ictalurus_punctatus
ENSMAMG00000012386	mrps18c	100	65.672	ENSKMAG00000016467	mrps18c	100	65.672	Kryptolebias_marmoratus
ENSMAMG00000012386	mrps18c	100	69.403	ENSLBEG00000019174	mrps18c	100	69.403	Labrus_bergylta
ENSMAMG00000012386	mrps18c	100	69.403	ENSLBEG00000021861	mrps18c	100	69.403	Labrus_bergylta
ENSMAMG00000012386	mrps18c	98	55.303	ENSLACG00000011243	mrps18c	99	55.303	Latimeria_chalumnae
ENSMAMG00000012386	mrps18c	71	68.421	ENSLOCG00000012115	mrps18c	70	68.421	Lepisosteus_oculatus
ENSMAMG00000012386	mrps18c	100	68.657	ENSMZEG00005023278	mrps18c	100	68.657	Maylandia_zebra
ENSMAMG00000012386	mrps18c	69	89.247	ENSMMOG00000011316	mrps18c	71	89.247	Mola_mola
ENSMAMG00000012386	mrps18c	100	68.657	ENSNBRG00000006182	mrps18c	100	68.657	Neolamprologus_brichardi
ENSMAMG00000012386	mrps18c	66	71.591	ENSMEUG00000010972	-	69	71.591	Notamacropus_eugenii
ENSMAMG00000012386	mrps18c	100	70.896	ENSONIG00000012527	mrps18c	91	83.696	Oreochromis_niloticus
ENSMAMG00000012386	mrps18c	100	61.940	ENSORLG00015006869	mrps18c	100	61.940	Oryzias_latipes_hsok
ENSMAMG00000012386	mrps18c	66	74.157	ENSOMEG00000005009	mrps18c	86	74.157	Oryzias_melastigma
ENSMAMG00000012386	mrps18c	100	57.143	ENSPKIG00000021736	mrps18c	100	57.143	Paramormyrops_kingsleyae
ENSMAMG00000012386	mrps18c	68	83.516	ENSPMGG00000002991	mrps18c	92	83.516	Periophthalmus_magnuspinnatus
ENSMAMG00000012386	mrps18c	100	59.701	ENSPFOG00000002351	mrps18c	83	59.701	Poecilia_formosa
ENSMAMG00000012386	mrps18c	100	59.701	ENSPLAG00000015187	mrps18c	100	59.701	Poecilia_latipinna
ENSMAMG00000012386	mrps18c	100	59.701	ENSPMEG00000014488	mrps18c	83	59.701	Poecilia_mexicana
ENSMAMG00000012386	mrps18c	62	79.518	ENSPREG00000012593	mrps18c	85	79.518	Poecilia_reticulata
ENSMAMG00000012386	mrps18c	100	67.910	ENSPNYG00000010654	mrps18c	100	67.910	Pundamilia_nyererei
ENSMAMG00000012386	mrps18c	85	59.200	ENSPNAG00000009350	mrps18c	85	72.527	Pygocentrus_nattereri
ENSMAMG00000012386	mrps18c	100	56.618	ENSSFOG00015019444	mrps18c	100	56.618	Scleropages_formosus
ENSMAMG00000012386	mrps18c	100	71.642	ENSSDUG00000015676	mrps18c	100	71.642	Seriola_dumerili
ENSMAMG00000012386	mrps18c	85	75.424	ENSSLDG00000002034	mrps18c	91	75.424	Seriola_lalandi_dorsalis
ENSMAMG00000012386	mrps18c	69	64.516	ENSSPUG00000013990	-	68	64.516	Sphenodon_punctatus
ENSMAMG00000012386	mrps18c	99	65.414	ENSSPAG00000008687	mrps18c	99	65.414	Stegastes_partitus
ENSMAMG00000012386	mrps18c	100	64.925	ENSTRUG00000024403	mrps18c	100	64.925	Takifugu_rubripes
ENSMAMG00000012386	mrps18c	100	64.925	ENSTNIG00000005674	mrps18c	100	64.925	Tetraodon_nigroviridis
ENSMAMG00000012386	mrps18c	66	73.034	ENSXETG00000027597	mrps18c	68	73.034	Xenopus_tropicalis
ENSMAMG00000012386	mrps18c	100	59.701	ENSXCOG00000016208	mrps18c	87	79.310	Xiphophorus_couchianus
ENSMAMG00000012386	mrps18c	100	60.448	ENSXMAG00000012555	mrps18c	83	60.448	Xiphophorus_maculatus