EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000012406 (Gene tree)
Gene ID: 113128807
Gene Symbol: frg1
Alias: zgc:112426
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 8679 bases
Position: chrOOHQ01000044.1:5547866-5556544
Accession: 113128807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000018363	FRG1	PF06229.12	7.4e-81	1	1
ENSMAMP00000018370	FRG1	PF06229.12	1.5e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000018848	-	873	-	ENSMAMP00000018370	265 (aa)	-	-
ENSMAMT00000018841	-	843	-	ENSMAMP00000018363	255 (aa)	XP_026160169	UPI000E465104

Gene Model

Click here to download ENSMAMG00000012406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000012406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000012406	frg1	100	71.318	ENSG00000109536	FRG1	100	80.172	Homo_sapiens
ENSMAMG00000012406	frg1	100	91.373	ENSAPOG00000001060	frg1	100	91.373	Acanthochromis_polyacanthus
ENSMAMG00000012406	frg1	100	71.318	ENSAMEG00000013503	FRG1	100	70.930	Ailuropoda_melanoleuca
ENSMAMG00000012406	frg1	87	90.991	ENSACIG00000022283	frg1	100	90.991	Amphilophus_citrinellus
ENSMAMG00000012406	frg1	87	91.892	ENSAOCG00000024240	frg1	87	91.892	Amphiprion_ocellaris
ENSMAMG00000012406	frg1	100	91.373	ENSAPEG00000002486	frg1	100	91.373	Amphiprion_percula
ENSMAMG00000012406	frg1	100	89.412	ENSATEG00000010414	frg1	100	89.412	Anabas_testudineus
ENSMAMG00000012406	frg1	100	73.828	ENSAPLG00000007785	-	100	73.828	Anas_platyrhynchos
ENSMAMG00000012406	frg1	100	73.828	ENSACAG00000006877	-	100	73.828	Anolis_carolinensis
ENSMAMG00000012406	frg1	100	72.763	ENSANAG00000020876	FRG1	100	72.374	Aotus_nancymaae
ENSMAMG00000012406	frg1	100	81.569	ENSACLG00000027065	frg1	100	81.569	Astatotilapia_calliptera
ENSMAMG00000012406	frg1	100	81.641	ENSAMXG00000032700	frg1	100	81.641	Astyanax_mexicanus
ENSMAMG00000012406	frg1	100	71.318	ENSBTAG00000007089	FRG1	100	70.930	Bos_taurus
ENSMAMG00000012406	frg1	99	41.091	WBGene00014177	frg-1	99	41.544	Caenorhabditis_elegans
ENSMAMG00000012406	frg1	100	72.763	ENSCJAG00000011272	FRG1	100	72.374	Callithrix_jacchus
ENSMAMG00000012406	frg1	100	71.318	ENSCAFG00000007135	FRG1	100	70.930	Canis_familiaris
ENSMAMG00000012406	frg1	83	76.415	ENSCAFG00020000082	-	85	76.415	Canis_lupus_dingo
ENSMAMG00000012406	frg1	100	71.318	ENSCHIG00000011585	-	100	70.930	Capra_hircus
ENSMAMG00000012406	frg1	98	52.381	ENSTSYG00000031599	-	100	51.587	Carlito_syrichta
ENSMAMG00000012406	frg1	87	74.439	ENSCAPG00000016056	-	91	74.439	Cavia_aperea
ENSMAMG00000012406	frg1	100	72.374	ENSCPOG00000022277	-	100	71.984	Cavia_porcellus
ENSMAMG00000012406	frg1	100	72.763	ENSCCAG00000024627	FRG1	100	72.374	Cebus_capucinus
ENSMAMG00000012406	frg1	100	70.930	ENSCATG00000029230	FRG1	100	70.930	Cercocebus_atys
ENSMAMG00000012406	frg1	100	72.374	ENSCLAG00000000370	-	100	72.374	Chinchilla_lanigera
ENSMAMG00000012406	frg1	100	50.980	ENSCLAG00000006068	-	100	50.980	Chinchilla_lanigera
ENSMAMG00000012406	frg1	99	50.988	ENSCLAG00000009263	-	100	50.988	Chinchilla_lanigera
ENSMAMG00000012406	frg1	100	58.915	ENSCLAG00000004960	-	100	59.302	Chinchilla_lanigera
ENSMAMG00000012406	frg1	84	71.759	ENSCSAG00000017729	-	100	71.759	Chlorocebus_sabaeus
ENSMAMG00000012406	frg1	100	70.930	ENSCSAG00000002899	FRG1	100	70.930	Chlorocebus_sabaeus
ENSMAMG00000012406	frg1	86	76.256	ENSCPBG00000009211	-	85	76.256	Chrysemys_picta_bellii
ENSMAMG00000012406	frg1	99	47.566	ENSCING00000005161	-	96	46.304	Ciona_intestinalis
ENSMAMG00000012406	frg1	51	54.962	ENSCSAVG00000008018	-	72	54.962	Ciona_savignyi
ENSMAMG00000012406	frg1	100	70.930	ENSCANG00000020991	FRG1	100	70.930	Colobus_angolensis_palliatus
ENSMAMG00000012406	frg1	100	71.318	ENSCGRG00001014998	Frg1	100	70.543	Cricetulus_griseus_chok1gshd
ENSMAMG00000012406	frg1	100	58.366	ENSCGRG00000003902	-	96	58.755	Cricetulus_griseus_crigri
ENSMAMG00000012406	frg1	100	71.318	ENSCGRG00000011860	-	100	70.543	Cricetulus_griseus_crigri
ENSMAMG00000012406	frg1	96	83.197	ENSCSEG00000015950	frg1	100	83.197	Cynoglossus_semilaevis
ENSMAMG00000012406	frg1	100	87.451	ENSCVAG00000009985	frg1	100	87.451	Cyprinodon_variegatus
ENSMAMG00000012406	frg1	100	81.961	ENSDARG00000056504	frg1	100	85.915	Danio_rerio
ENSMAMG00000012406	frg1	100	71.705	ENSDNOG00000014886	FRG1	100	71.705	Dasypus_novemcinctus
ENSMAMG00000012406	frg1	100	63.953	ENSDORG00000016190	Frg1	100	64.341	Dipodomys_ordii
ENSMAMG00000012406	frg1	84	51.869	FBgn0036964	FRG1	81	51.869	Drosophila_melanogaster
ENSMAMG00000012406	frg1	100	70.930	ENSETEG00000012349	-	100	70.155	Echinops_telfairi
ENSMAMG00000012406	frg1	58	56.081	ENSEBUG00000012359	FRG1	89	56.081	Eptatretus_burgeri
ENSMAMG00000012406	frg1	100	72.374	ENSEASG00005017497	FRG1	100	72.763	Equus_asinus_asinus
ENSMAMG00000012406	frg1	100	72.374	ENSECAG00000003122	FRG1	100	72.763	Equus_caballus
ENSMAMG00000012406	frg1	62	77.070	ENSEEUG00000000145	-	100	77.070	Erinaceus_europaeus
ENSMAMG00000012406	frg1	100	84.314	ENSELUG00000021712	frg1	100	84.314	Esox_lucius
ENSMAMG00000012406	frg1	100	71.318	ENSFCAG00000025737	FRG1	100	70.930	Felis_catus
ENSMAMG00000012406	frg1	87	73.874	ENSFALG00000011231	-	87	73.874	Ficedula_albicollis
ENSMAMG00000012406	frg1	100	61.538	ENSFDAG00000012697	-	98	66.355	Fukomys_damarensis
ENSMAMG00000012406	frg1	100	72.374	ENSFDAG00000000962	-	100	71.595	Fukomys_damarensis
ENSMAMG00000012406	frg1	100	84.706	ENSFHEG00000010540	frg1	100	84.706	Fundulus_heteroclitus
ENSMAMG00000012406	frg1	100	80.000	ENSGMOG00000000867	frg1	100	80.000	Gadus_morhua
ENSMAMG00000012406	frg1	100	73.438	ENSGALG00000013590	-	100	73.438	Gallus_gallus
ENSMAMG00000012406	frg1	81	81.643	ENSGAFG00000013855	frg1	100	81.643	Gambusia_affinis
ENSMAMG00000012406	frg1	100	82.745	ENSGACG00000016888	frg1	100	82.745	Gasterosteus_aculeatus
ENSMAMG00000012406	frg1	100	74.219	ENSGAGG00000025012	-	100	74.219	Gopherus_agassizii
ENSMAMG00000012406	frg1	68	68.571	ENSGGOG00000012888	-	88	68.966	Gorilla_gorilla
ENSMAMG00000012406	frg1	100	45.247	ENSGGOG00000040796	-	100	44.487	Gorilla_gorilla
ENSMAMG00000012406	frg1	100	87.843	ENSHBUG00000010667	frg1	100	87.843	Haplochromis_burtoni
ENSMAMG00000012406	frg1	100	72.763	ENSHGLG00000005601	FRG1	100	72.374	Heterocephalus_glaber_female
ENSMAMG00000012406	frg1	100	62.109	ENSHGLG00000001211	-	100	62.500	Heterocephalus_glaber_female
ENSMAMG00000012406	frg1	99	67.969	ENSHGLG00000020943	-	99	67.578	Heterocephalus_glaber_female
ENSMAMG00000012406	frg1	99	69.531	ENSHGLG00000020402	-	94	69.141	Heterocephalus_glaber_female
ENSMAMG00000012406	frg1	99	67.969	ENSHGLG00100021211	-	99	67.578	Heterocephalus_glaber_male
ENSMAMG00000012406	frg1	100	73.152	ENSHGLG00100016261	-	100	72.763	Heterocephalus_glaber_male
ENSMAMG00000012406	frg1	100	58.594	ENSHGLG00100015285	-	100	57.422	Heterocephalus_glaber_male
ENSMAMG00000012406	frg1	100	62.500	ENSHGLG00100010674	-	100	62.891	Heterocephalus_glaber_male
ENSMAMG00000012406	frg1	88	81.333	ENSHCOG00000000224	frg1	96	81.333	Hippocampus_comes
ENSMAMG00000012406	frg1	100	77.821	ENSIPUG00000022716	frg1	100	77.821	Ictalurus_punctatus
ENSMAMG00000012406	frg1	100	71.705	ENSSTOG00000002857	-	100	71.705	Ictidomys_tridecemlineatus
ENSMAMG00000012406	frg1	100	71.705	ENSJJAG00000020625	Frg1	100	71.318	Jaculus_jaculus
ENSMAMG00000012406	frg1	100	87.451	ENSKMAG00000005841	frg1	100	87.451	Kryptolebias_marmoratus
ENSMAMG00000012406	frg1	100	85.098	ENSLBEG00000001466	frg1	100	85.098	Labrus_bergylta
ENSMAMG00000012406	frg1	100	62.835	ENSLACG00000010243	frg1	100	62.835	Latimeria_chalumnae
ENSMAMG00000012406	frg1	100	79.608	ENSLOCG00000013868	frg1	100	79.608	Lepisosteus_oculatus
ENSMAMG00000012406	frg1	100	70.930	ENSLAFG00000011191	FRG1	100	70.930	Loxodonta_africana
ENSMAMG00000012406	frg1	100	70.930	ENSMFAG00000031178	FRG1	100	70.930	Macaca_fascicularis
ENSMAMG00000012406	frg1	83	65.888	ENSMFAG00000042873	-	89	65.888	Macaca_fascicularis
ENSMAMG00000012406	frg1	100	70.930	ENSMMUG00000001824	FRG1	100	70.930	Macaca_mulatta
ENSMAMG00000012406	frg1	78	65.517	ENSMMUG00000047496	-	87	65.517	Macaca_mulatta
ENSMAMG00000012406	frg1	96	65.992	ENSMNEG00000018620	FRG1	100	65.182	Macaca_nemestrina
ENSMAMG00000012406	frg1	100	70.930	ENSMLEG00000028881	FRG1	100	70.930	Mandrillus_leucophaeus
ENSMAMG00000012406	frg1	100	87.451	ENSMZEG00005007549	frg1	100	87.451	Maylandia_zebra
ENSMAMG00000012406	frg1	100	73.828	ENSMGAG00000011481	-	100	73.828	Meleagris_gallopavo
ENSMAMG00000012406	frg1	100	71.318	ENSMAUG00000000847	Frg1	100	70.543	Mesocricetus_auratus
ENSMAMG00000012406	frg1	100	71.705	ENSMICG00000046816	FRG1	100	70.930	Microcebus_murinus
ENSMAMG00000012406	frg1	100	65.370	ENSMOCG00000023000	Frg1	100	66.148	Microtus_ochrogaster
ENSMAMG00000012406	frg1	88	87.946	ENSMMOG00000004008	frg1	95	87.946	Mola_mola
ENSMAMG00000012406	frg1	100	70.543	ENSMODG00000019031	-	87	70.543	Monodelphis_domestica
ENSMAMG00000012406	frg1	100	87.059	ENSMALG00000018497	frg1	100	87.059	Monopterus_albus
ENSMAMG00000012406	frg1	100	70.930	MGP_CAROLIEiJ_G0031006	Frg1	100	70.155	Mus_caroli
ENSMAMG00000012406	frg1	100	70.930	ENSMUSG00000031590	Frg1	100	70.155	Mus_musculus
ENSMAMG00000012406	frg1	100	71.318	MGP_PahariEiJ_G0021475	Frg1	100	70.543	Mus_pahari
ENSMAMG00000012406	frg1	100	70.543	MGP_SPRETEiJ_G0032120	Frg1	100	69.767	Mus_spretus
ENSMAMG00000012406	frg1	100	71.318	ENSMPUG00000017962	FRG1	100	70.930	Mustela_putorius_furo
ENSMAMG00000012406	frg1	100	72.763	ENSMLUG00000023179	FRG1	100	72.763	Myotis_lucifugus
ENSMAMG00000012406	frg1	100	71.318	ENSNGAG00000016411	Frg1	100	70.543	Nannospalax_galili
ENSMAMG00000012406	frg1	81	80.676	ENSNBRG00000006806	frg1	95	80.676	Neolamprologus_brichardi
ENSMAMG00000012406	frg1	100	60.853	ENSNLEG00000032333	-	100	60.853	Nomascus_leucogenys
ENSMAMG00000012406	frg1	78	65.672	ENSNLEG00000028874	-	91	65.672	Nomascus_leucogenys
ENSMAMG00000012406	frg1	78	67.164	ENSNLEG00000036059	-	86	67.164	Nomascus_leucogenys
ENSMAMG00000012406	frg1	100	65.134	ENSNLEG00000035849	-	100	64.751	Nomascus_leucogenys
ENSMAMG00000012406	frg1	100	52.734	ENSNLEG00000032846	-	100	64.286	Nomascus_leucogenys
ENSMAMG00000012406	frg1	100	71.206	ENSNLEG00000000930	FRG1	100	71.984	Nomascus_leucogenys
ENSMAMG00000012406	frg1	60	75.000	ENSMEUG00000007509	-	59	75.000	Notamacropus_eugenii
ENSMAMG00000012406	frg1	100	60.853	ENSOPRG00000004722	-	100	60.853	Ochotona_princeps
ENSMAMG00000012406	frg1	100	72.374	ENSODEG00000006458	-	100	72.374	Octodon_degus
ENSMAMG00000012406	frg1	100	55.469	ENSODEG00000006953	-	100	54.688	Octodon_degus
ENSMAMG00000012406	frg1	100	88.281	ENSONIG00000010162	frg1	100	88.281	Oreochromis_niloticus
ENSMAMG00000012406	frg1	71	74.444	ENSOANG00000005659	-	80	74.444	Ornithorhynchus_anatinus
ENSMAMG00000012406	frg1	100	70.930	ENSOCUG00000009038	-	100	70.155	Oryctolagus_cuniculus
ENSMAMG00000012406	frg1	96	83.607	ENSORLG00000008106	frg1	91	82.661	Oryzias_latipes
ENSMAMG00000012406	frg1	100	84.314	ENSORLG00020014355	frg1	100	84.314	Oryzias_latipes_hni
ENSMAMG00000012406	frg1	100	84.314	ENSORLG00015014159	frg1	100	84.314	Oryzias_latipes_hsok
ENSMAMG00000012406	frg1	85	81.019	ENSOMEG00000002468	frg1	89	81.019	Oryzias_melastigma
ENSMAMG00000012406	frg1	100	72.093	ENSOGAG00000005749	-	100	71.318	Otolemur_garnettii
ENSMAMG00000012406	frg1	100	69.732	ENSOARG00000008592	FRG1	100	69.349	Ovis_aries
ENSMAMG00000012406	frg1	96	54.054	ENSPPAG00000043174	-	100	53.150	Pan_paniscus
ENSMAMG00000012406	frg1	84	70.833	ENSPPAG00000043170	-	100	70.833	Pan_paniscus
ENSMAMG00000012406	frg1	100	70.817	ENSPPRG00000019777	-	100	70.428	Panthera_pardus
ENSMAMG00000012406	frg1	100	70.930	ENSPPRG00000025003	-	100	70.543	Panthera_pardus
ENSMAMG00000012406	frg1	100	71.206	ENSPTIG00000006566	-	100	70.817	Panthera_tigris_altaica
ENSMAMG00000012406	frg1	100	70.930	ENSPTIG00000006588	-	100	70.543	Panthera_tigris_altaica
ENSMAMG00000012406	frg1	96	59.109	ENSPTRG00000044710	-	100	59.109	Pan_troglodytes
ENSMAMG00000012406	frg1	100	71.318	ENSPTRG00000016671	-	100	71.318	Pan_troglodytes
ENSMAMG00000012406	frg1	88	61.472	ENSPTRG00000043123	-	93	60.870	Pan_troglodytes
ENSMAMG00000012406	frg1	95	58.776	ENSPTRG00000052363	-	94	67.327	Pan_troglodytes
ENSMAMG00000012406	frg1	100	71.318	ENSPTRG00000050205	-	100	71.318	Pan_troglodytes
ENSMAMG00000012406	frg1	96	58.300	ENSPTRG00000050204	-	100	58.300	Pan_troglodytes
ENSMAMG00000012406	frg1	71	64.481	ENSPANG00000031530	-	85	64.481	Papio_anubis
ENSMAMG00000012406	frg1	100	74.219	ENSPKIG00000024189	frg1	100	75.391	Paramormyrops_kingsleyae
ENSMAMG00000012406	frg1	84	77.674	ENSPSIG00000017971	-	82	77.674	Pelodiscus_sinensis
ENSMAMG00000012406	frg1	98	76.587	ENSPMGG00000019273	frg1	100	76.707	Periophthalmus_magnuspinnatus
ENSMAMG00000012406	frg1	100	71.318	ENSPEMG00000000650	Frg1	100	70.543	Peromyscus_maniculatus_bairdii
ENSMAMG00000012406	frg1	100	70.930	ENSPCIG00000007530	-	69	70.930	Phascolarctos_cinereus
ENSMAMG00000012406	frg1	100	84.706	ENSPFOG00000006721	frg1	100	84.706	Poecilia_formosa
ENSMAMG00000012406	frg1	100	85.098	ENSPMEG00000013816	frg1	100	85.098	Poecilia_mexicana
ENSMAMG00000012406	frg1	100	84.314	ENSPREG00000000097	frg1	100	84.314	Poecilia_reticulata
ENSMAMG00000012406	frg1	62	70.253	ENSPPYG00000011275	-	88	69.565	Pongo_abelii
ENSMAMG00000012406	frg1	56	77.241	ENSPPYG00000029810	-	100	77.241	Pongo_abelii
ENSMAMG00000012406	frg1	95	69.106	ENSPCAG00000014953	-	100	68.699	Procavia_capensis
ENSMAMG00000012406	frg1	79	58.333	ENSPCOG00000022726	FRG1	95	57.843	Propithecus_coquereli
ENSMAMG00000012406	frg1	100	57.364	ENSPVAG00000010551	FRG1	100	56.589	Pteropus_vampyrus
ENSMAMG00000012406	frg1	67	88.953	ENSPNYG00000015209	frg1	74	88.953	Pundamilia_nyererei
ENSMAMG00000012406	frg1	100	79.070	ENSPNAG00000013259	frg1	100	77.132	Pygocentrus_nattereri
ENSMAMG00000012406	frg1	100	70.930	ENSRNOG00000009846	Frg1	100	70.155	Rattus_norvegicus
ENSMAMG00000012406	frg1	87	69.643	ENSRBIG00000042219	-	94	69.333	Rhinopithecus_bieti
ENSMAMG00000012406	frg1	82	68.720	ENSRROG00000032084	-	88	68.720	Rhinopithecus_roxellana
ENSMAMG00000012406	frg1	100	68.992	ENSRROG00000015523	FRG1	100	68.217	Rhinopithecus_roxellana
ENSMAMG00000012406	frg1	100	72.763	ENSSBOG00000034175	FRG1	100	72.374	Saimiri_boliviensis_boliviensis
ENSMAMG00000012406	frg1	100	70.543	ENSSHAG00000005886	-	100	70.543	Sarcophilus_harrisii
ENSMAMG00000012406	frg1	97	76.613	ENSSFOG00015021361	frg1	99	77.823	Scleropages_formosus
ENSMAMG00000012406	frg1	100	86.275	ENSSMAG00000001213	frg1	100	86.275	Scophthalmus_maximus
ENSMAMG00000012406	frg1	100	90.196	ENSSDUG00000018886	frg1	100	90.196	Seriola_dumerili
ENSMAMG00000012406	frg1	100	89.804	ENSSLDG00000024191	frg1	100	89.804	Seriola_lalandi_dorsalis
ENSMAMG00000012406	frg1	65	75.595	ENSSARG00000002471	-	93	74.138	Sorex_araneus
ENSMAMG00000012406	frg1	100	71.765	ENSSPUG00000017326	-	100	70.588	Sphenodon_punctatus
ENSMAMG00000012406	frg1	100	81.961	ENSSPAG00000013294	frg1	100	81.961	Stegastes_partitus
ENSMAMG00000012406	frg1	100	71.705	ENSSSCG00000006996	FRG1	100	71.318	Sus_scrofa
ENSMAMG00000012406	frg1	100	73.438	ENSTGUG00000007028	-	100	71.875	Taeniopygia_guttata
ENSMAMG00000012406	frg1	100	83.137	ENSTRUG00000016208	frg1	100	83.137	Takifugu_rubripes
ENSMAMG00000012406	frg1	100	83.137	ENSTNIG00000007128	frg1	100	83.137	Tetraodon_nigroviridis
ENSMAMG00000012406	frg1	83	53.081	ENSTBEG00000012789	-	99	53.081	Tupaia_belangeri
ENSMAMG00000012406	frg1	78	47.980	ENSTBEG00000017605	-	99	47.980	Tupaia_belangeri
ENSMAMG00000012406	frg1	100	70.543	ENSTBEG00000014491	-	100	69.767	Tupaia_belangeri
ENSMAMG00000012406	frg1	100	71.705	ENSTTRG00000003429	FRG1	100	71.318	Tursiops_truncatus
ENSMAMG00000012406	frg1	96	69.919	ENSUAMG00000012123	-	100	68.980	Ursus_americanus
ENSMAMG00000012406	frg1	100	71.318	ENSUMAG00000021119	FRG1	100	70.930	Ursus_maritimus
ENSMAMG00000012406	frg1	100	69.380	ENSVPAG00000000616	FRG1	100	69.380	Vicugna_pacos
ENSMAMG00000012406	frg1	87	74.888	ENSVPAG00000011977	-	94	74.888	Vicugna_pacos
ENSMAMG00000012406	frg1	83	76.415	ENSVVUG00000007181	-	77	76.415	Vulpes_vulpes
ENSMAMG00000012406	frg1	100	71.206	ENSXETG00000012470	frg1	100	71.094	Xenopus_tropicalis
ENSMAMG00000012406	frg1	100	79.608	ENSXCOG00000005312	frg1	100	79.608	Xiphophorus_couchianus
ENSMAMG00000012406	frg1	100	84.314	ENSXMAG00000007751	frg1	100	84.314	Xiphophorus_maculatus