EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000012822 (Gene tree)
Gene ID: 113129042
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 10957 bases
Position: chrOOHQ01000036.1:5851826-5862782
Accession: 113129042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000019205	ResIII	PF04851.15	9.6e-12	1	1
ENSMAMP00000019133	ResIII	PF04851.15	1.4e-11	1	1
ENSMAMP00000019164	ResIII	PF04851.15	1.4e-11	1	1
ENSMAMP00000019111	ResIII	PF04851.15	3.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000019608	-	3296	-	ENSMAMP00000019111	954 (aa)	-	-
ENSMAMT00000019630	-	3146	XM_026304735	ENSMAMP00000019133	1015 (aa)	XP_026160520	UPI000E45DA3C
ENSMAMT00000019704	-	2577	-	ENSMAMP00000019205	858 (aa)	-	-
ENSMAMT00000019661	-	3035	-	ENSMAMP00000019164	978 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000012822's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000012822's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000012822	chd1l	52	49.744	ENSMAMG00000009850	hells	79	34.168
ENSMAMG00000012822	chd1l	63	40.909	ENSMAMG00000014294	smarca5	53	41.198
ENSMAMG00000012822	chd1l	53	41.401	ENSMAMG00000007069	srcap	87	41.350
ENSMAMG00000012822	chd1l	56	37.153	ENSMAMG00000000933	smarcad1a	51	37.153
ENSMAMG00000012822	chd1l	52	32.535	ENSMAMG00000022180	rad54l	73	32.735
ENSMAMG00000012822	chd1l	52	32.490	ENSMAMG00000012269	rad54b	57	32.490

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000012822	chd1l	97	61.944	ENSG00000131778	CHD1L	97	64.204	Homo_sapiens
ENSMAMG00000012822	chd1l	100	84.567	ENSAPOG00000001539	chd1l	99	86.982	Acanthochromis_polyacanthus
ENSMAMG00000012822	chd1l	98	62.137	ENSAMEG00000017063	CHD1L	96	63.490	Ailuropoda_melanoleuca
ENSMAMG00000012822	chd1l	97	82.415	ENSACIG00000001164	chd1l	99	83.904	Amphilophus_citrinellus
ENSMAMG00000012822	chd1l	100	84.463	ENSAOCG00000014510	chd1l	100	83.922	Amphiprion_ocellaris
ENSMAMG00000012822	chd1l	99	81.221	ENSAPEG00000017573	chd1l	95	83.641	Amphiprion_percula
ENSMAMG00000012822	chd1l	99	80.969	ENSAPEG00000017450	chd1l	95	83.737	Amphiprion_percula
ENSMAMG00000012822	chd1l	100	87.227	ENSATEG00000013058	chd1l	100	86.230	Anabas_testudineus
ENSMAMG00000012822	chd1l	97	60.588	ENSAPLG00000009976	CHD1L	95	62.573	Anas_platyrhynchos
ENSMAMG00000012822	chd1l	99	58.863	ENSACAG00000017686	CHD1L	98	60.289	Anolis_carolinensis
ENSMAMG00000012822	chd1l	97	61.665	ENSANAG00000024347	CHD1L	95	63.182	Aotus_nancymaae
ENSMAMG00000012822	chd1l	99	82.989	ENSACLG00000019304	chd1l	96	83.429	Astatotilapia_calliptera
ENSMAMG00000012822	chd1l	100	61.964	ENSAMXG00000012367	chd1l	100	60.138	Astyanax_mexicanus
ENSMAMG00000012822	chd1l	99	61.521	ENSBTAG00000020831	CHD1L	96	62.671	Bos_taurus
ENSMAMG00000012822	chd1l	98	61.583	ENSCJAG00000002406	CHD1L	95	63.341	Callithrix_jacchus
ENSMAMG00000012822	chd1l	98	59.466	ENSCAFG00000010944	CHD1L	96	60.825	Canis_familiaris
ENSMAMG00000012822	chd1l	98	61.369	ENSCAFG00020020121	CHD1L	97	62.658	Canis_lupus_dingo
ENSMAMG00000012822	chd1l	99	61.175	ENSCHIG00000013871	CHD1L	97	62.671	Capra_hircus
ENSMAMG00000012822	chd1l	95	62.262	ENSTSYG00000003005	CHD1L	98	63.971	Carlito_syrichta
ENSMAMG00000012822	chd1l	98	60.116	ENSCPOG00000009000	CHD1L	96	61.432	Cavia_porcellus
ENSMAMG00000012822	chd1l	98	59.022	ENSCCAG00000036079	CHD1L	95	60.789	Cebus_capucinus
ENSMAMG00000012822	chd1l	98	61.672	ENSCATG00000031044	CHD1L	96	62.959	Cercocebus_atys
ENSMAMG00000012822	chd1l	98	62.033	ENSCLAG00000000880	CHD1L	97	63.710	Chinchilla_lanigera
ENSMAMG00000012822	chd1l	98	61.905	ENSCSAG00000018386	CHD1L	96	63.188	Chlorocebus_sabaeus
ENSMAMG00000012822	chd1l	97	63.423	ENSCPBG00000002600	CHD1L	97	64.583	Chrysemys_picta_bellii
ENSMAMG00000012822	chd1l	98	60.859	ENSCANG00000020239	CHD1L	95	62.616	Colobus_angolensis_palliatus
ENSMAMG00000012822	chd1l	99	62.371	ENSCGRG00001021624	Chd1l	99	63.235	Cricetulus_griseus_chok1gshd
ENSMAMG00000012822	chd1l	95	63.234	ENSCGRG00000007554	Chd1l	99	64.118	Cricetulus_griseus_crigri
ENSMAMG00000012822	chd1l	99	80.253	ENSCVAG00000002595	chd1l	97	79.728	Cyprinodon_variegatus
ENSMAMG00000012822	chd1l	99	71.445	ENSDARG00000015471	chd1l	99	69.268	Danio_rerio
ENSMAMG00000012822	chd1l	98	61.888	ENSDNOG00000019504	CHD1L	95	63.437	Dasypus_novemcinctus
ENSMAMG00000012822	chd1l	98	60.349	ENSDORG00000013555	Chd1l	96	62.225	Dipodomys_ordii
ENSMAMG00000012822	chd1l	89	58.018	ENSETEG00000008445	CHD1L	87	60.862	Echinops_telfairi
ENSMAMG00000012822	chd1l	76	52.207	ENSEBUG00000005791	chd1l	84	52.023	Eptatretus_burgeri
ENSMAMG00000012822	chd1l	99	61.290	ENSEASG00005007364	CHD1L	98	63.838	Equus_asinus_asinus
ENSMAMG00000012822	chd1l	99	61.175	ENSECAG00000008915	CHD1L	98	63.715	Equus_caballus
ENSMAMG00000012822	chd1l	100	60.794	ENSELUG00000016844	chd1l	99	60.940	Esox_lucius
ENSMAMG00000012822	chd1l	97	61.737	ENSFCAG00000007777	CHD1L	96	63.490	Felis_catus
ENSMAMG00000012822	chd1l	97	60.492	ENSFALG00000006087	CHD1L	95	62.384	Ficedula_albicollis
ENSMAMG00000012822	chd1l	96	61.502	ENSFDAG00000012431	CHD1L	98	63.701	Fukomys_damarensis
ENSMAMG00000012822	chd1l	99	80.069	ENSFHEG00000012420	chd1l	100	79.150	Fundulus_heteroclitus
ENSMAMG00000012822	chd1l	98	61.047	ENSGALG00000015038	CHD1L	96	62.572	Gallus_gallus
ENSMAMG00000012822	chd1l	99	80.253	ENSGAFG00000018198	chd1l	100	79.317	Gambusia_affinis
ENSMAMG00000012822	chd1l	59	84.149	ENSGACG00000014042	chd1l	98	84.736	Gasterosteus_aculeatus
ENSMAMG00000012822	chd1l	97	63.115	ENSGAGG00000014432	CHD1L	96	64.630	Gopherus_agassizii
ENSMAMG00000012822	chd1l	97	61.124	ENSGGOG00000001067	CHD1L	95	62.894	Gorilla_gorilla
ENSMAMG00000012822	chd1l	99	83.103	ENSHBUG00000007464	chd1l	98	83.447	Haplochromis_burtoni
ENSMAMG00000012822	chd1l	98	59.907	ENSHGLG00000008933	CHD1L	96	62.065	Heterocephalus_glaber_female
ENSMAMG00000012822	chd1l	95	59.401	ENSHGLG00100007155	CHD1L	98	61.356	Heterocephalus_glaber_male
ENSMAMG00000012822	chd1l	99	73.486	ENSHCOG00000012787	chd1l	94	75.775	Hippocampus_comes
ENSMAMG00000012822	chd1l	100	65.714	ENSIPUG00000022617	chd1l	99	64.620	Ictalurus_punctatus
ENSMAMG00000012822	chd1l	98	56.410	ENSSTOG00000007032	CHD1L	96	58.304	Ictidomys_tridecemlineatus
ENSMAMG00000012822	chd1l	100	81.790	ENSKMAG00000014358	chd1l	100	80.841	Kryptolebias_marmoratus
ENSMAMG00000012822	chd1l	100	83.368	ENSLBEG00000023845	chd1l	100	82.216	Labrus_bergylta
ENSMAMG00000012822	chd1l	99	58.738	ENSLACG00000006262	CHD1L	97	58.573	Latimeria_chalumnae
ENSMAMG00000012822	chd1l	99	69.725	ENSLOCG00000010574	chd1l	99	68.411	Lepisosteus_oculatus
ENSMAMG00000012822	chd1l	96	62.159	ENSLAFG00000018136	CHD1L	98	63.948	Loxodonta_africana
ENSMAMG00000012822	chd1l	96	61.302	ENSMFAG00000043562	CHD1L	99	63.350	Macaca_fascicularis
ENSMAMG00000012822	chd1l	98	61.789	ENSMMUG00000009024	CHD1L	96	63.073	Macaca_mulatta
ENSMAMG00000012822	chd1l	98	61.789	ENSMNEG00000039905	CHD1L	96	63.073	Macaca_nemestrina
ENSMAMG00000012822	chd1l	98	61.789	ENSMLEG00000030900	CHD1L	96	63.073	Mandrillus_leucophaeus
ENSMAMG00000012822	chd1l	99	83.103	ENSMZEG00005020830	chd1l	95	83.421	Maylandia_zebra
ENSMAMG00000012822	chd1l	96	60.895	ENSMGAG00000014304	CHD1L	99	62.985	Meleagris_gallopavo
ENSMAMG00000012822	chd1l	98	62.791	ENSMICG00000002497	CHD1L	95	64.542	Microcebus_murinus
ENSMAMG00000012822	chd1l	98	62.181	ENSMOCG00000006305	Chd1l	98	63.337	Microtus_ochrogaster
ENSMAMG00000012822	chd1l	99	74.800	ENSMMOG00000005964	chd1l	91	77.346	Mola_mola
ENSMAMG00000012822	chd1l	99	60.800	ENSMODG00000018717	CHD1L	97	62.642	Monodelphis_domestica
ENSMAMG00000012822	chd1l	99	87.825	ENSMALG00000014675	chd1l	99	86.888	Monopterus_albus
ENSMAMG00000012822	chd1l	98	61.888	MGP_CAROLIEiJ_G0025401	Chd1l	98	63.086	Mus_caroli
ENSMAMG00000012822	chd1l	98	61.778	ENSMUSG00000028089	Chd1l	97	62.971	Mus_musculus
ENSMAMG00000012822	chd1l	98	61.877	MGP_PahariEiJ_G0026845	Chd1l	96	63.626	Mus_pahari
ENSMAMG00000012822	chd1l	98	61.618	MGP_SPRETEiJ_G0026347	Chd1l	97	62.971	Mus_spretus
ENSMAMG00000012822	chd1l	98	62.674	ENSMPUG00000000615	CHD1L	96	64.023	Mustela_putorius_furo
ENSMAMG00000012822	chd1l	97	61.395	ENSMLUG00000007573	CHD1L	94	62.920	Myotis_lucifugus
ENSMAMG00000012822	chd1l	97	58.080	ENSNGAG00000000908	Chd1l	97	59.743	Nannospalax_galili
ENSMAMG00000012822	chd1l	99	77.929	ENSNBRG00000006021	chd1l	95	80.708	Neolamprologus_brichardi
ENSMAMG00000012822	chd1l	98	60.718	ENSNLEG00000000179	CHD1L	95	62.777	Nomascus_leucogenys
ENSMAMG00000012822	chd1l	96	53.214	ENSOPRG00000006973	CHD1L	99	54.717	Ochotona_princeps
ENSMAMG00000012822	chd1l	98	57.742	ENSODEG00000002494	CHD1L	97	59.587	Octodon_degus
ENSMAMG00000012822	chd1l	100	84.008	ENSONIG00000003183	chd1l	100	83.220	Oreochromis_niloticus
ENSMAMG00000012822	chd1l	88	58.876	ENSOANG00000003068	CHD1L	93	61.617	Ornithorhynchus_anatinus
ENSMAMG00000012822	chd1l	98	60.345	ENSOCUG00000009336	CHD1L	95	60.710	Oryctolagus_cuniculus
ENSMAMG00000012822	chd1l	99	76.064	ENSORLG00000003673	chd1l	96	77.904	Oryzias_latipes
ENSMAMG00000012822	chd1l	99	77.497	ENSORLG00020005123	chd1l	99	77.714	Oryzias_latipes_hni
ENSMAMG00000012822	chd1l	99	77.294	ENSORLG00015001680	chd1l	99	77.916	Oryzias_latipes_hsok
ENSMAMG00000012822	chd1l	80	80.435	ENSOMEG00000006109	chd1l	96	74.080	Oryzias_melastigma
ENSMAMG00000012822	chd1l	98	61.806	ENSOGAG00000008775	CHD1L	95	63.353	Otolemur_garnettii
ENSMAMG00000012822	chd1l	99	61.009	ENSOARG00000020547	CHD1L	98	63.679	Ovis_aries
ENSMAMG00000012822	chd1l	98	61.189	ENSPPAG00000039193	CHD1L	98	63.447	Pan_paniscus
ENSMAMG00000012822	chd1l	97	61.988	ENSPPRG00000010258	CHD1L	97	62.812	Panthera_pardus
ENSMAMG00000012822	chd1l	98	60.839	ENSPTRG00000001220	CHD1L	95	62.993	Pan_troglodytes
ENSMAMG00000012822	chd1l	98	61.001	ENSPANG00000009170	CHD1L	96	63.073	Papio_anubis
ENSMAMG00000012822	chd1l	99	70.426	ENSPKIG00000022166	chd1l	97	71.084	Paramormyrops_kingsleyae
ENSMAMG00000012822	chd1l	99	61.812	ENSPSIG00000012595	CHD1L	97	63.110	Pelodiscus_sinensis
ENSMAMG00000012822	chd1l	98	60.417	ENSPEMG00000013528	Chd1l	98	61.991	Peromyscus_maniculatus_bairdii
ENSMAMG00000012822	chd1l	92	61.975	ENSPCIG00000030409	CHD1L	98	63.961	Phascolarctos_cinereus
ENSMAMG00000012822	chd1l	99	79.626	ENSPFOG00000015948	chd1l	100	78.495	Poecilia_formosa
ENSMAMG00000012822	chd1l	99	80.478	ENSPLAG00000015145	chd1l	100	79.512	Poecilia_latipinna
ENSMAMG00000012822	chd1l	99	79.171	ENSPMEG00000008720	chd1l	99	79.101	Poecilia_mexicana
ENSMAMG00000012822	chd1l	99	78.555	ENSPREG00000017885	chd1l	98	80.460	Poecilia_reticulata
ENSMAMG00000012822	chd1l	99	61.220	ENSPPYG00000000946	CHD1L	96	62.959	Pongo_abelii
ENSMAMG00000012822	chd1l	93	55.405	ENSPCAG00000005959	CHD1L	91	57.457	Procavia_capensis
ENSMAMG00000012822	chd1l	96	57.551	ENSPVAG00000006084	CHD1L	99	59.155	Pteropus_vampyrus
ENSMAMG00000012822	chd1l	99	81.257	ENSPNYG00000013001	chd1l	97	83.562	Pundamilia_nyererei
ENSMAMG00000012822	chd1l	100	69.825	ENSPNAG00000011881	chd1l	100	68.283	Pygocentrus_nattereri
ENSMAMG00000012822	chd1l	98	61.850	ENSRNOG00000017669	Chd1l	98	62.950	Rattus_norvegicus
ENSMAMG00000012822	chd1l	98	60.976	ENSRBIG00000041272	CHD1L	95	62.731	Rhinopithecus_bieti
ENSMAMG00000012822	chd1l	98	61.047	ENSRROG00000041354	CHD1L	96	62.631	Rhinopithecus_roxellana
ENSMAMG00000012822	chd1l	99	60.183	ENSSHAG00000017395	CHD1L	98	61.582	Sarcophilus_harrisii
ENSMAMG00000012822	chd1l	99	71.183	ENSSFOG00015003649	chd1l	98	71.692	Scleropages_formosus
ENSMAMG00000012822	chd1l	100	82.698	ENSSMAG00000019377	chd1l	100	81.528	Scophthalmus_maximus
ENSMAMG00000012822	chd1l	96	84.982	ENSSDUG00000019831	chd1l	93	87.247	Seriola_dumerili
ENSMAMG00000012822	chd1l	97	85.242	ENSSLDG00000012714	chd1l	94	87.367	Seriola_lalandi_dorsalis
ENSMAMG00000012822	chd1l	97	61.313	ENSSPUG00000016865	CHD1L	96	63.182	Sphenodon_punctatus
ENSMAMG00000012822	chd1l	99	84.447	ENSSPAG00000017653	chd1l	99	84.801	Stegastes_partitus
ENSMAMG00000012822	chd1l	99	59.217	ENSSSCG00000006701	CHD1L	97	60.850	Sus_scrofa
ENSMAMG00000012822	chd1l	97	60.798	ENSTGUG00000013392	-	99	62.225	Taeniopygia_guttata
ENSMAMG00000012822	chd1l	97	67.409	ENSTNIG00000004902	chd1l	99	69.050	Tetraodon_nigroviridis
ENSMAMG00000012822	chd1l	96	59.595	ENSTTRG00000011711	CHD1L	99	61.059	Tursiops_truncatus
ENSMAMG00000012822	chd1l	98	61.816	ENSUAMG00000021991	CHD1L	95	64.916	Ursus_americanus
ENSMAMG00000012822	chd1l	98	62.121	ENSUMAG00000009733	CHD1L	96	64.678	Ursus_maritimus
ENSMAMG00000012822	chd1l	98	61.324	ENSVVUG00000007316	CHD1L	92	62.615	Vulpes_vulpes
ENSMAMG00000012822	chd1l	99	77.445	ENSXCOG00000008336	chd1l	97	76.435	Xiphophorus_couchianus
ENSMAMG00000012822	chd1l	99	81.191	ENSXMAG00000015898	chd1l	100	80.255	Xiphophorus_maculatus