EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000013212 (Gene tree)
Gene ID: 113124792
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR domain containing 12b
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 2918 bases
Position: chrOOHQ01000096.1:13075871-13078788
Accession: ZDB-GENE-041114-172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000019673	zf-C2H2	PF00096.26	5.6e-11	1	2
ENSMAMP00000019673	zf-C2H2	PF00096.26	5.6e-11	2	2
ENSMAMP00000019673	zf-met	PF12874.7	8.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000020190	-	1125	-	ENSMAMP00000019673	374 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000013212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000013212's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000013212	prdm12b	66	41.176	ENSMAMG00000013419	prdm5	85	42.105
ENSMAMG00000013212	prdm12b	100	73.580	ENSMAMG00000018988	-	100	74.010

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000013212	prdm12b	90	83.086	ENSG00000130711	PRDM12	99	75.130	Homo_sapiens
ENSMAMG00000013212	prdm12b	100	68.267	ENSAPOG00000018234	-	100	68.267	Acanthochromis_polyacanthus
ENSMAMG00000013212	prdm12b	100	93.523	ENSAPOG00000016051	prdm12b	100	93.523	Acanthochromis_polyacanthus
ENSMAMG00000013212	prdm12b	90	80.655	ENSAMEG00000016234	PRDM12	99	80.952	Ailuropoda_melanoleuca
ENSMAMG00000013212	prdm12b	100	91.557	ENSACIG00000019578	prdm12b	100	92.084	Amphilophus_citrinellus
ENSMAMG00000013212	prdm12b	100	79.284	ENSACIG00000005193	-	100	79.897	Amphilophus_citrinellus
ENSMAMG00000013212	prdm12b	100	91.623	ENSAOCG00000015040	prdm12b	100	92.932	Amphiprion_ocellaris
ENSMAMG00000013212	prdm12b	100	91.842	ENSAPEG00000015092	prdm12b	100	93.158	Amphiprion_percula
ENSMAMG00000013212	prdm12b	100	72.544	ENSAPEG00000022849	-	99	73.300	Amphiprion_percula
ENSMAMG00000013212	prdm12b	100	80.362	ENSATEG00000014595	-	100	80.620	Anabas_testudineus
ENSMAMG00000013212	prdm12b	94	80.398	ENSANAG00000020616	PRDM12	96	82.111	Aotus_nancymaae
ENSMAMG00000013212	prdm12b	100	87.798	ENSACLG00000011876	prdm12b	100	87.798	Astatotilapia_calliptera
ENSMAMG00000013212	prdm12b	100	76.309	ENSACLG00000007631	-	100	76.559	Astatotilapia_calliptera
ENSMAMG00000013212	prdm12b	100	82.759	ENSAMXG00000033665	prdm12b	100	83.641	Astyanax_mexicanus
ENSMAMG00000013212	prdm12b	100	82.133	ENSAMXG00000008540	PRDM12	100	80.214	Astyanax_mexicanus
ENSMAMG00000013212	prdm12b	90	83.383	ENSBTAG00000023797	PRDM12	99	76.579	Bos_taurus
ENSMAMG00000013212	prdm12b	90	83.086	ENSCJAG00000020540	PRDM12	99	76.517	Callithrix_jacchus
ENSMAMG00000013212	prdm12b	79	84.068	ENSCAFG00000023076	PRDM12	99	75.953	Canis_familiaris
ENSMAMG00000013212	prdm12b	90	83.383	ENSCAFG00020024046	PRDM12	99	76.240	Canis_lupus_dingo
ENSMAMG00000013212	prdm12b	90	83.383	ENSCHIG00000025005	PRDM12	99	76.640	Capra_hircus
ENSMAMG00000013212	prdm12b	87	82.462	ENSCPOG00000005901	PRDM12	95	82.462	Cavia_porcellus
ENSMAMG00000013212	prdm12b	90	83.086	ENSCCAG00000037485	PRDM12	99	75.916	Cebus_capucinus
ENSMAMG00000013212	prdm12b	90	83.086	ENSCATG00000020327	PRDM12	99	75.916	Cercocebus_atys
ENSMAMG00000013212	prdm12b	90	82.789	ENSCLAG00000005499	PRDM12	90	81.818	Chinchilla_lanigera
ENSMAMG00000013212	prdm12b	90	83.086	ENSCSAG00000014756	PRDM12	99	75.718	Chlorocebus_sabaeus
ENSMAMG00000013212	prdm12b	100	79.467	ENSCPBG00000022628	PRDM12	99	78.933	Chrysemys_picta_bellii
ENSMAMG00000013212	prdm12b	90	83.383	ENSCGRG00001015005	Prdm12	99	75.584	Cricetulus_griseus_chok1gshd
ENSMAMG00000013212	prdm12b	100	79.337	ENSCVAG00000000944	-	100	79.337	Cyprinodon_variegatus
ENSMAMG00000013212	prdm12b	100	89.600	ENSCVAG00000017166	prdm12b	100	89.362	Cyprinodon_variegatus
ENSMAMG00000013212	prdm12b	100	83.777	ENSDARG00000007430	prdm12b	100	83.245	Danio_rerio
ENSMAMG00000013212	prdm12b	90	82.840	ENSDNOG00000042302	PRDM12	99	75.457	Dasypus_novemcinctus
ENSMAMG00000013212	prdm12b	84	67.273	ENSEBUG00000016780	prdm12b	73	68.788	Eptatretus_burgeri
ENSMAMG00000013212	prdm12b	94	80.682	ENSEASG00005008472	PRDM12	99	76.640	Equus_asinus_asinus
ENSMAMG00000013212	prdm12b	94	80.682	ENSECAG00000005933	PRDM12	99	76.640	Equus_caballus
ENSMAMG00000013212	prdm12b	100	83.024	ENSELUG00000009905	prdm12b	100	83.024	Esox_lucius
ENSMAMG00000013212	prdm12b	100	84.656	ENSELUG00000013674	PRDM12	100	85.185	Esox_lucius
ENSMAMG00000013212	prdm12b	90	83.383	ENSFCAG00000043086	PRDM12	99	76.440	Felis_catus
ENSMAMG00000013212	prdm12b	100	79.412	ENSFALG00000001445	PRDM12	89	78.877	Ficedula_albicollis
ENSMAMG00000013212	prdm12b	100	88.624	ENSFHEG00000003944	prdm12b	100	88.391	Fundulus_heteroclitus
ENSMAMG00000013212	prdm12b	100	75.561	ENSFHEG00000007746	-	100	74.813	Fundulus_heteroclitus
ENSMAMG00000013212	prdm12b	100	84.293	ENSGMOG00000011797	prdm12b	100	84.211	Gadus_morhua
ENSMAMG00000013212	prdm12b	100	79.412	ENSGALG00000003895	PRDM12	99	78.877	Gallus_gallus
ENSMAMG00000013212	prdm12b	100	87.173	ENSGAFG00000010827	prdm12b	99	87.435	Gambusia_affinis
ENSMAMG00000013212	prdm12b	100	91.711	ENSGACG00000016713	prdm12b	99	91.176	Gasterosteus_aculeatus
ENSMAMG00000013212	prdm12b	100	79.467	ENSGAGG00000014083	PRDM12	99	78.933	Gopherus_agassizii
ENSMAMG00000013212	prdm12b	90	82.789	ENSGGOG00000010568	PRDM12	99	75.065	Gorilla_gorilla
ENSMAMG00000013212	prdm12b	100	92.042	ENSHBUG00000022878	prdm12b	100	92.042	Haplochromis_burtoni
ENSMAMG00000013212	prdm12b	100	76.309	ENSHBUG00000022537	-	93	76.559	Haplochromis_burtoni
ENSMAMG00000013212	prdm12b	90	83.086	ENSHGLG00000013939	PRDM12	99	75.260	Heterocephalus_glaber_female
ENSMAMG00000013212	prdm12b	100	71.990	ENSHCOG00000021167	-	100	70.419	Hippocampus_comes
ENSMAMG00000013212	prdm12b	90	89.766	ENSHCOG00000003663	prdm12b	100	81.888	Hippocampus_comes
ENSMAMG00000013212	prdm12b	100	78.610	ENSIPUG00000019544	PRDM12	100	78.610	Ictalurus_punctatus
ENSMAMG00000013212	prdm12b	100	84.267	ENSIPUG00000017053	prdm12b	100	84.267	Ictalurus_punctatus
ENSMAMG00000013212	prdm12b	95	80.056	ENSSTOG00000005986	PRDM12	86	82.405	Ictidomys_tridecemlineatus
ENSMAMG00000013212	prdm12b	91	82.941	ENSJJAG00000005424	Prdm12	99	82.405	Jaculus_jaculus
ENSMAMG00000013212	prdm12b	100	82.266	ENSKMAG00000016921	prdm12b	100	83.168	Kryptolebias_marmoratus
ENSMAMG00000013212	prdm12b	94	78.992	ENSKMAG00000021205	-	94	77.562	Kryptolebias_marmoratus
ENSMAMG00000013212	prdm12b	100	91.316	ENSLBEG00000017769	prdm12b	100	91.053	Labrus_bergylta
ENSMAMG00000013212	prdm12b	100	79.948	ENSLBEG00000007776	-	100	78.906	Labrus_bergylta
ENSMAMG00000013212	prdm12b	100	80.000	ENSLACG00000017560	PRDM12	99	79.733	Latimeria_chalumnae
ENSMAMG00000013212	prdm12b	100	82.940	ENSLOCG00000005429	prdm12b	100	82.677	Lepisosteus_oculatus
ENSMAMG00000013212	prdm12b	90	81.871	ENSLAFG00000006979	PRDM12	90	80.925	Loxodonta_africana
ENSMAMG00000013212	prdm12b	100	75.726	ENSMFAG00000040322	PRDM12	99	75.130	Macaca_fascicularis
ENSMAMG00000013212	prdm12b	90	83.086	ENSMNEG00000037234	PRDM12	99	75.916	Macaca_nemestrina
ENSMAMG00000013212	prdm12b	100	75.931	ENSMZEG00005000415	PRDM12	100	76.179	Maylandia_zebra
ENSMAMG00000013212	prdm12b	98	79.076	ENSMGAG00000005438	PRDM12	91	84.226	Meleagris_gallopavo
ENSMAMG00000013212	prdm12b	100	76.923	ENSMAUG00000013040	Prdm12	99	76.658	Mesocricetus_auratus
ENSMAMG00000013212	prdm12b	93	80.857	ENSMICG00000015480	PRDM12	91	82.405	Microcebus_murinus
ENSMAMG00000013212	prdm12b	96	79.778	ENSMOCG00000021026	Prdm12	90	82.405	Microtus_ochrogaster
ENSMAMG00000013212	prdm12b	100	78.400	ENSMODG00000012108	PRDM12	99	78.457	Monodelphis_domestica
ENSMAMG00000013212	prdm12b	100	79.679	ENSMALG00000021901	prdm12b	99	79.144	Monopterus_albus
ENSMAMG00000013212	prdm12b	90	83.383	MGP_CAROLIEiJ_G0023414	Prdm12	99	75.781	Mus_caroli
ENSMAMG00000013212	prdm12b	90	83.383	ENSMUSG00000079466	Prdm12	99	75.781	Mus_musculus
ENSMAMG00000013212	prdm12b	90	83.383	MGP_PahariEiJ_G0024871	Prdm12	99	75.781	Mus_pahari
ENSMAMG00000013212	prdm12b	90	83.383	MGP_SPRETEiJ_G0024331	Prdm12	99	75.781	Mus_spretus
ENSMAMG00000013212	prdm12b	90	83.086	ENSNGAG00000018480	Prdm12	99	76.267	Nannospalax_galili
ENSMAMG00000013212	prdm12b	100	72.468	ENSNBRG00000024312	-	100	72.208	Neolamprologus_brichardi
ENSMAMG00000013212	prdm12b	100	92.368	ENSNBRG00000006727	prdm12b	100	92.368	Neolamprologus_brichardi
ENSMAMG00000013212	prdm12b	100	70.400	ENSMEUG00000003828	PRDM12	99	70.479	Notamacropus_eugenii
ENSMAMG00000013212	prdm12b	90	83.086	ENSOPRG00000008680	PRDM12	99	82.111	Ochotona_princeps
ENSMAMG00000013212	prdm12b	98	78.415	ENSODEG00000016282	PRDM12	62	82.111	Octodon_degus
ENSMAMG00000013212	prdm12b	64	76.151	ENSOANG00000001043	PRDM12	100	75.314	Ornithorhynchus_anatinus
ENSMAMG00000013212	prdm12b	88	79.394	ENSOCUG00000008241	PRDM12	96	82.637	Oryctolagus_cuniculus
ENSMAMG00000013212	prdm12b	100	78.880	ENSORLG00000017558	-	100	79.389	Oryzias_latipes
ENSMAMG00000013212	prdm12b	100	88.684	ENSORLG00000007114	prdm12b	99	88.684	Oryzias_latipes
ENSMAMG00000013212	prdm12b	100	87.368	ENSORLG00020019565	prdm12b	99	88.421	Oryzias_latipes_hni
ENSMAMG00000013212	prdm12b	100	79.135	ENSORLG00020013167	-	100	79.389	Oryzias_latipes_hni
ENSMAMG00000013212	prdm12b	100	87.071	ENSORLG00015007621	prdm12b	99	88.684	Oryzias_latipes_hsok
ENSMAMG00000013212	prdm12b	100	78.880	ENSORLG00015003435	-	100	79.389	Oryzias_latipes_hsok
ENSMAMG00000013212	prdm12b	100	79.481	ENSOMEG00000007762	-	100	79.481	Oryzias_melastigma
ENSMAMG00000013212	prdm12b	100	88.542	ENSOMEG00000004134	prdm12b	99	86.911	Oryzias_melastigma
ENSMAMG00000013212	prdm12b	90	83.383	ENSOGAG00000007557	PRDM12	98	82.405	Otolemur_garnettii
ENSMAMG00000013212	prdm12b	80	80.936	ENSPPAG00000031506	-	99	79.672	Pan_paniscus
ENSMAMG00000013212	prdm12b	100	71.809	ENSPPRG00000023024	PRDM12	92	71.543	Panthera_pardus
ENSMAMG00000013212	prdm12b	90	83.086	ENSPTRG00000043324	-	99	75.325	Pan_troglodytes
ENSMAMG00000013212	prdm12b	90	83.086	ENSPTRG00000021475	PRDM12	99	75.325	Pan_troglodytes
ENSMAMG00000013212	prdm12b	90	83.086	ENSPANG00000025967	PRDM12	99	75.916	Papio_anubis
ENSMAMG00000013212	prdm12b	100	85.067	ENSPKIG00000007228	prdm12b	100	85.067	Paramormyrops_kingsleyae
ENSMAMG00000013212	prdm12b	94	79.155	ENSPKIG00000004305	PRDM12	94	81.602	Paramormyrops_kingsleyae
ENSMAMG00000013212	prdm12b	100	79.467	ENSPSIG00000006739	PRDM12	99	78.933	Pelodiscus_sinensis
ENSMAMG00000013212	prdm12b	100	90.691	ENSPMGG00000008867	prdm12b	99	90.691	Periophthalmus_magnuspinnatus
ENSMAMG00000013212	prdm12b	100	74.495	ENSPMGG00000002356	-	100	73.737	Periophthalmus_magnuspinnatus
ENSMAMG00000013212	prdm12b	97	79.006	ENSPEMG00000009969	Prdm12	90	82.111	Peromyscus_maniculatus_bairdii
ENSMAMG00000013212	prdm12b	100	78.400	ENSPCIG00000024119	PRDM12	99	78.457	Phascolarctos_cinereus
ENSMAMG00000013212	prdm12b	100	89.390	ENSPFOG00000019841	prdm12b	100	87.798	Poecilia_formosa
ENSMAMG00000013212	prdm12b	100	86.945	ENSPLAG00000016626	prdm12b	99	87.206	Poecilia_latipinna
ENSMAMG00000013212	prdm12b	96	86.523	ENSPMEG00000016698	prdm12b	99	86.992	Poecilia_mexicana
ENSMAMG00000013212	prdm12b	100	87.240	ENSPREG00000015073	prdm12b	99	86.719	Poecilia_reticulata
ENSMAMG00000013212	prdm12b	95	74.114	ENSPREG00000003211	-	94	73.569	Poecilia_reticulata
ENSMAMG00000013212	prdm12b	94	80.682	ENSPPYG00000019694	PRDM12	92	83.086	Pongo_abelii
ENSMAMG00000013212	prdm12b	90	83.383	ENSPCOG00000022255	PRDM12	99	75.844	Propithecus_coquereli
ENSMAMG00000013212	prdm12b	90	83.383	ENSPVAG00000001511	PRDM12	99	75.194	Pteropus_vampyrus
ENSMAMG00000013212	prdm12b	100	90.501	ENSPNYG00000009607	prdm12b	100	90.765	Pundamilia_nyererei
ENSMAMG00000013212	prdm12b	100	75.931	ENSPNYG00000013589	-	100	76.179	Pundamilia_nyererei
ENSMAMG00000013212	prdm12b	100	79.167	ENSPNAG00000013396	PRDM12	100	79.167	Pygocentrus_nattereri
ENSMAMG00000013212	prdm12b	100	83.733	ENSPNAG00000024532	prdm12b	100	83.733	Pygocentrus_nattereri
ENSMAMG00000013212	prdm12b	90	83.383	ENSRNOG00000009218	Prdm12	99	75.781	Rattus_norvegicus
ENSMAMG00000013212	prdm12b	88	82.979	ENSRBIG00000042712	PRDM12	91	80.409	Rhinopithecus_bieti
ENSMAMG00000013212	prdm12b	89	83.183	ENSRROG00000043554	PRDM12	99	83.183	Rhinopithecus_roxellana
ENSMAMG00000013212	prdm12b	100	77.926	ENSSHAG00000015972	PRDM12	99	77.719	Sarcophilus_harrisii
ENSMAMG00000013212	prdm12b	100	89.203	ENSSMAG00000003754	prdm12b	100	89.717	Scophthalmus_maximus
ENSMAMG00000013212	prdm12b	100	80.779	ENSSDUG00000019071	-	100	80.779	Seriola_dumerili
ENSMAMG00000013212	prdm12b	100	94.010	ENSSDUG00000023498	prdm12b	100	94.010	Seriola_dumerili
ENSMAMG00000013212	prdm12b	100	95.013	ENSSLDG00000009557	prdm12b	100	95.013	Seriola_lalandi_dorsalis
ENSMAMG00000013212	prdm12b	100	77.926	ENSSLDG00000013562	-	100	77.660	Seriola_lalandi_dorsalis
ENSMAMG00000013212	prdm12b	100	79.733	ENSSPUG00000013424	PRDM12	99	79.200	Sphenodon_punctatus
ENSMAMG00000013212	prdm12b	100	72.423	ENSSPAG00000022420	-	100	72.423	Stegastes_partitus
ENSMAMG00000013212	prdm12b	100	90.078	ENSSPAG00000018824	prdm12b	100	91.906	Stegastes_partitus
ENSMAMG00000013212	prdm12b	90	83.383	ENSSSCG00000005703	PRDM12	99	76.240	Sus_scrofa
ENSMAMG00000013212	prdm12b	100	78.571	ENSTRUG00000013239	-	100	78.042	Takifugu_rubripes
ENSMAMG00000013212	prdm12b	100	90.186	ENSTRUG00000018659	prdm12b	100	89.920	Takifugu_rubripes
ENSMAMG00000013212	prdm12b	100	88.859	ENSTNIG00000009020	prdm12b	99	88.594	Tetraodon_nigroviridis
ENSMAMG00000013212	prdm12b	100	75.000	ENSTNIG00000005859	-	99	74.737	Tetraodon_nigroviridis
ENSMAMG00000013212	prdm12b	90	83.383	ENSUAMG00000009653	PRDM12	91	82.405	Ursus_americanus
ENSMAMG00000013212	prdm12b	90	83.383	ENSVVUG00000027662	PRDM12	78	82.405	Vulpes_vulpes
ENSMAMG00000013212	prdm12b	100	88.360	ENSXCOG00000002836	prdm12b	99	88.158	Xiphophorus_couchianus
ENSMAMG00000013212	prdm12b	100	89.153	ENSXMAG00000005537	prdm12b	100	88.947	Xiphophorus_maculatus
ENSMAMG00000013212	prdm12b	100	75.990	ENSXMAG00000028012	-	100	75.990	Xiphophorus_maculatus