EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000013223 (Gene tree)
Gene ID: -
Gene Symbol: scaf4a
Alias: fa96d07|si:dkey-50p8.3|wu:fa96d07
Full Name: SR-related CTD-associated factor 4a
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 7931 bases
Position: chrOOHQ01000002.1:16156652-16164582
Accession: ZDB-GENE-030131-9003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000019653	RRM_1	PF00076.22	3.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000020169	-	5343	-	ENSMAMP00000019653	856 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000013223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000013223's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000013223	scaf4a	100	77.726	ENSAPOG00000002946	scaf4a	74	80.278	Acanthochromis_polyacanthus
ENSMAMG00000013223	scaf4a	100	78.563	ENSAOCG00000000615	scaf4a	74	81.460	Amphiprion_ocellaris
ENSMAMG00000013223	scaf4a	100	78.397	ENSAPEG00000021229	scaf4a	74	81.301	Amphiprion_percula
ENSMAMG00000013223	scaf4a	99	45.549	ENSAMXG00000008585	scaf4a	70	46.689	Astyanax_mexicanus
ENSMAMG00000013223	scaf4a	99	70.125	ENSCSEG00000019549	scaf4a	75	67.731	Cynoglossus_semilaevis
ENSMAMG00000013223	scaf4a	78	51.363	ENSDARG00000077093	scaf4a	73	44.855	Danio_rerio
ENSMAMG00000013223	scaf4a	73	52.725	ENSELUG00000009909	scaf4a	69	50.383	Esox_lucius
ENSMAMG00000013223	scaf4a	55	75.316	ENSFHEG00000017866	scaf4a	75	64.643	Fundulus_heteroclitus
ENSMAMG00000013223	scaf4a	52	77.528	ENSGAFG00000019460	scaf4a	61	70.985	Gambusia_affinis
ENSMAMG00000013223	scaf4a	63	71.975	ENSGACG00000020580	scaf4a	53	75.647	Gasterosteus_aculeatus
ENSMAMG00000013223	scaf4a	100	75.982	ENSHBUG00000007920	scaf4a	77	78.522	Haplochromis_burtoni
ENSMAMG00000013223	scaf4a	56	91.912	ENSHCOG00000006849	scaf4a	53	91.852	Hippocampus_comes
ENSMAMG00000013223	scaf4a	82	48.552	ENSIPUG00000011285	scaf4	74	44.394	Ictalurus_punctatus
ENSMAMG00000013223	scaf4a	100	73.441	ENSLBEG00000014675	scaf4a	76	74.394	Labrus_bergylta
ENSMAMG00000013223	scaf4a	63	50.449	ENSLACG00000013913	SCAF4	57	49.845	Latimeria_chalumnae
ENSMAMG00000013223	scaf4a	81	45.014	ENSLOCG00000009162	scaf4a	57	53.695	Lepisosteus_oculatus
ENSMAMG00000013223	scaf4a	99	77.093	ENSMZEG00005024349	scaf4a	74	77.215	Maylandia_zebra
ENSMAMG00000013223	scaf4a	100	74.230	ENSONIG00000004687	scaf4a	75	78.425	Oreochromis_niloticus
ENSMAMG00000013223	scaf4a	100	68.126	ENSORLG00000004384	scaf4a	74	69.570	Oryzias_latipes
ENSMAMG00000013223	scaf4a	100	68.279	ENSORLG00020011857	scaf4a	74	68.049	Oryzias_latipes_hni
ENSMAMG00000013223	scaf4a	100	68.743	ENSORLG00015017880	scaf4a	74	68.468	Oryzias_latipes_hsok
ENSMAMG00000013223	scaf4a	99	69.629	ENSOMEG00000014482	scaf4a	74	70.975	Oryzias_melastigma
ENSMAMG00000013223	scaf4a	77	41.394	ENSPSIG00000014242	SCAF4	56	50.148	Pelodiscus_sinensis
ENSMAMG00000013223	scaf4a	83	49.459	ENSPMGG00000016741	scaf4a	61	49.860	Periophthalmus_magnuspinnatus
ENSMAMG00000013223	scaf4a	54	74.633	ENSPLAG00000001972	scaf4a	62	70.962	Poecilia_latipinna
ENSMAMG00000013223	scaf4a	61	50.998	ENSPNAG00000016892	scaf4a	71	47.345	Pygocentrus_nattereri
ENSMAMG00000013223	scaf4a	81	50.141	ENSSFOG00015006338	scaf4a	81	47.973	Scleropages_formosus
ENSMAMG00000013223	scaf4a	100	83.699	ENSSDUG00000012918	scaf4a	74	83.774	Seriola_dumerili
ENSMAMG00000013223	scaf4a	100	81.430	ENSSLDG00000021671	scaf4a	75	83.812	Seriola_lalandi_dorsalis
ENSMAMG00000013223	scaf4a	77	54.299	ENSXETG00000007351	scaf4	52	51.515	Xenopus_tropicalis