EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000013278 (Gene tree)
Gene ID: 113123294
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC113123294
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 4058 bases
Position: chrOOHQ01000107.1:9773308-9777365
Accession: 113123294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000019714	MMR_HSR1	PF01926.23	2.7e-09	1	1
ENSMAMP00000019711	MMR_HSR1	PF01926.23	3.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000020235	-	2869	-	ENSMAMP00000019711	598 (aa)	XP_026150995	UPI000E4601FE
ENSMAMT00000020239	-	3051	-	ENSMAMP00000019714	553 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000013278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000013278's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000013278	-	54	30.844	ENSAPOG00000020108	-	57	33.171	Acanthochromis_polyacanthus
ENSMAMG00000013278	-	51	31.773	ENSACIG00000012714	-	71	35.426	Amphilophus_citrinellus
ENSMAMG00000013278	-	93	41.207	ENSATEG00000010935	-	83	43.699	Anabas_testudineus
ENSMAMG00000013278	-	67	48.819	ENSATEG00000010951	-	75	49.319	Anabas_testudineus
ENSMAMG00000013278	-	52	33.119	ENSFHEG00000013922	-	57	39.450	Fundulus_heteroclitus
ENSMAMG00000013278	-	56	42.547	ENSGAFG00000006126	-	66	39.691	Gambusia_affinis
ENSMAMG00000013278	-	51	46.377	ENSIPUG00000023837	-	60	46.377	Ictalurus_punctatus
ENSMAMG00000013278	-	54	50.831	ENSKMAG00000014089	-	65	52.963	Kryptolebias_marmoratus
ENSMAMG00000013278	-	60	43.785	ENSKMAG00000014074	-	63	43.956	Kryptolebias_marmoratus
ENSMAMG00000013278	-	88	38.521	ENSMZEG00005020552	-	53	51.103	Maylandia_zebra
ENSMAMG00000013278	-	56	31.132	ENSONIG00000014258	-	60	37.561	Oreochromis_niloticus
ENSMAMG00000013278	-	53	43.434	ENSPFOG00000003348	-	76	45.607	Poecilia_formosa
ENSMAMG00000013278	-	99	33.169	ENSPREG00000008177	-	94	33.227	Poecilia_reticulata
ENSMAMG00000013278	-	93	47.826	ENSSDUG00000001398	-	82	49.027	Seriola_dumerili
ENSMAMG00000013278	-	52	49.180	ENSSLDG00000001762	-	59	54.980	Seriola_lalandi_dorsalis
ENSMAMG00000013278	-	52	37.019	ENSSPAG00000013926	-	98	37.019	Stegastes_partitus
ENSMAMG00000013278	-	56	58.128	ENSSPAG00000015913	-	95	58.128	Stegastes_partitus
ENSMAMG00000013278	-	93	37.363	ENSXMAG00000024901	-	90	34.888	Xiphophorus_maculatus