EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000013404 (Gene tree)
Gene ID: 113142642
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 23415 bases
Position: chrOOHQ01000002.1:16202189-16225603
Accession: 113142642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000019898	Exo_endo_phos	PF03372.23	6.1e-14	1	1
ENSMAMP00000020007	Exo_endo_phos	PF03372.23	6.3e-14	1	1
ENSMAMP00000019970	Exo_endo_phos	PF03372.23	6.3e-14	1	1
ENSMAMP00000019921	Exo_endo_phos	PF03372.23	6.4e-14	1	1
ENSMAMP00000019970	DUF1866	PF08952.11	4.6e-57	1	1
ENSMAMP00000019921	DUF1866	PF08952.11	4.6e-57	1	1
ENSMAMP00000019898	DUF1866	PF08952.11	4.7e-57	1	1
ENSMAMP00000020007	DUF1866	PF08952.11	4.7e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000020537	-	7798	-	ENSMAMP00000020007	1692 (aa)	-	-
ENSMAMT00000020499	-	7810	XM_026327726	ENSMAMP00000019970	1644 (aa)	XP_026183511	UPI000E464576
ENSMAMT00000020427	-	7803	XM_026327719	ENSMAMP00000019898	1678 (aa)	XP_026183504	UPI000E457FD6
ENSMAMT00000020450	-	7834	XM_026327723	ENSMAMP00000019921	1652 (aa)	XP_026183508	UPI000E458767

Gene Model

Click here to download ENSMAMG00000013404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000013404's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000013404	synj1	89	65.707	ENSG00000159082	SYNJ1	100	83.357	Homo_sapiens
ENSMAMG00000013404	synj1	100	87.976	ENSAPOG00000002809	synj1	100	88.766	Acanthochromis_polyacanthus
ENSMAMG00000013404	synj1	88	63.294	ENSAMEG00000015028	SYNJ1	83	66.399	Ailuropoda_melanoleuca
ENSMAMG00000013404	synj1	99	83.313	ENSACIG00000008857	synj1	99	90.639	Amphilophus_citrinellus
ENSMAMG00000013404	synj1	100	88.762	ENSAOCG00000009835	synj1	100	89.520	Amphiprion_ocellaris
ENSMAMG00000013404	synj1	100	88.949	ENSAPEG00000021010	synj1	100	89.312	Amphiprion_percula
ENSMAMG00000013404	synj1	100	88.274	ENSATEG00000002306	synj1	100	88.761	Anabas_testudineus
ENSMAMG00000013404	synj1	88	62.175	ENSAPLG00000011832	SYNJ1	85	63.834	Anas_platyrhynchos
ENSMAMG00000013404	synj1	79	71.108	ENSACAG00000003006	-	99	69.799	Anolis_carolinensis
ENSMAMG00000013404	synj1	89	62.842	ENSANAG00000027325	SYNJ1	99	67.414	Aotus_nancymaae
ENSMAMG00000013404	synj1	100	87.993	ENSACLG00000002255	synj1	100	90.375	Astatotilapia_calliptera
ENSMAMG00000013404	synj1	100	75.238	ENSAMXG00000008208	synj1	99	74.450	Astyanax_mexicanus
ENSMAMG00000013404	synj1	88	66.304	ENSBTAG00000003063	SYNJ1	99	68.510	Bos_taurus
ENSMAMG00000013404	synj1	89	65.552	ENSCJAG00000009187	SYNJ1	99	67.414	Callithrix_jacchus
ENSMAMG00000013404	synj1	88	63.032	ENSCAFG00000009041	SYNJ1	99	68.651	Canis_familiaris
ENSMAMG00000013404	synj1	88	66.164	ENSCAFG00020025776	SYNJ1	84	75.747	Canis_lupus_dingo
ENSMAMG00000013404	synj1	88	66.051	ENSCHIG00000005095	SYNJ1	87	66.785	Capra_hircus
ENSMAMG00000013404	synj1	89	65.346	ENSTSYG00000014541	SYNJ1	99	66.966	Carlito_syrichta
ENSMAMG00000013404	synj1	69	81.333	ENSCAPG00000014483	SYNJ1	75	81.333	Cavia_aperea
ENSMAMG00000013404	synj1	88	65.173	ENSCPOG00000012182	SYNJ1	99	66.397	Cavia_porcellus
ENSMAMG00000013404	synj1	88	66.007	ENSCCAG00000020825	SYNJ1	99	67.040	Cebus_capucinus
ENSMAMG00000013404	synj1	89	64.070	ENSCATG00000033891	SYNJ1	99	69.400	Cercocebus_atys
ENSMAMG00000013404	synj1	99	58.625	ENSCLAG00000009796	SYNJ1	100	82.734	Chinchilla_lanigera
ENSMAMG00000013404	synj1	79	66.691	ENSCSAG00000009654	SYNJ1	99	66.889	Chlorocebus_sabaeus
ENSMAMG00000013404	synj1	81	72.305	ENSCHOG00000012390	SYNJ1	54	72.491	Choloepus_hoffmanni
ENSMAMG00000013404	synj1	72	71.659	ENSCPBG00000006402	SYNJ1	96	70.626	Chrysemys_picta_bellii
ENSMAMG00000013404	synj1	89	65.661	ENSCANG00000031359	SYNJ1	99	67.464	Colobus_angolensis_palliatus
ENSMAMG00000013404	synj1	88	65.880	ENSCGRG00001010861	Synj1	83	75.658	Cricetulus_griseus_chok1gshd
ENSMAMG00000013404	synj1	78	68.726	ENSCGRG00000015749	Synj1	100	82.590	Cricetulus_griseus_crigri
ENSMAMG00000013404	synj1	76	89.179	ENSCSEG00000019614	synj1	98	91.211	Cynoglossus_semilaevis
ENSMAMG00000013404	synj1	95	83.302	ENSCVAG00000019250	synj1	99	89.808	Cyprinodon_variegatus
ENSMAMG00000013404	synj1	80	83.120	ENSDARG00000025011	synj1	100	83.647	Danio_rerio
ENSMAMG00000013404	synj1	94	59.026	ENSDNOG00000010732	SYNJ1	85	64.917	Dasypus_novemcinctus
ENSMAMG00000013404	synj1	67	77.778	ENSETEG00000018674	SYNJ1	59	78.292	Echinops_telfairi
ENSMAMG00000013404	synj1	88	66.348	ENSEASG00005006287	SYNJ1	96	78.942	Equus_asinus_asinus
ENSMAMG00000013404	synj1	88	66.598	ENSECAG00000004829	SYNJ1	98	72.574	Equus_caballus
ENSMAMG00000013404	synj1	81	72.119	ENSEEUG00000005150	SYNJ1	60	72.119	Erinaceus_europaeus
ENSMAMG00000013404	synj1	100	71.834	ENSELUG00000009731	synj1	99	74.390	Esox_lucius
ENSMAMG00000013404	synj1	88	66.301	ENSFCAG00000012498	SYNJ1	99	67.669	Felis_catus
ENSMAMG00000013404	synj1	79	50.000	ENSFALG00000004680	SYNJ1	80	60.461	Ficedula_albicollis
ENSMAMG00000013404	synj1	79	66.861	ENSFDAG00000016818	SYNJ1	100	83.165	Fukomys_damarensis
ENSMAMG00000013404	synj1	99	81.317	ENSFHEG00000017689	synj1	99	81.846	Fundulus_heteroclitus
ENSMAMG00000013404	synj1	64	86.700	ENSGMOG00000014852	synj1	81	87.365	Gadus_morhua
ENSMAMG00000013404	synj1	88	64.822	ENSGALG00000034317	SYNJ1	83	68.437	Gallus_gallus
ENSMAMG00000013404	synj1	99	83.708	ENSGAFG00000019466	synj1	100	83.647	Gambusia_affinis
ENSMAMG00000013404	synj1	80	86.576	ENSGACG00000020575	synj1	99	86.525	Gasterosteus_aculeatus
ENSMAMG00000013404	synj1	95	62.508	ENSGAGG00000022523	SYNJ1	99	68.085	Gopherus_agassizii
ENSMAMG00000013404	synj1	89	62.929	ENSGGOG00000015945	SYNJ1	99	69.773	Gorilla_gorilla
ENSMAMG00000013404	synj1	100	87.344	ENSHBUG00000007774	synj1	100	90.448	Haplochromis_burtoni
ENSMAMG00000013404	synj1	88	61.751	ENSHGLG00000006420	SYNJ1	100	82.590	Heterocephalus_glaber_female
ENSMAMG00000013404	synj1	88	63.468	ENSHGLG00100012591	SYNJ1	100	82.590	Heterocephalus_glaber_male
ENSMAMG00000013404	synj1	76	94.188	ENSHCOG00000012774	synj1	96	94.188	Hippocampus_comes
ENSMAMG00000013404	synj1	81	83.657	ENSIPUG00000010691	SYNJ1	86	82.784	Ictalurus_punctatus
ENSMAMG00000013404	synj1	88	63.325	ENSSTOG00000015806	SYNJ1	99	67.997	Ictidomys_tridecemlineatus
ENSMAMG00000013404	synj1	89	58.263	ENSJJAG00000020168	Synj1	85	61.588	Jaculus_jaculus
ENSMAMG00000013404	synj1	100	80.825	ENSKMAG00000004221	synj1	100	81.681	Kryptolebias_marmoratus
ENSMAMG00000013404	synj1	90	86.061	ENSLBEG00000015081	synj1	99	85.828	Labrus_bergylta
ENSMAMG00000013404	synj1	99	59.928	ENSLACG00000005928	SYNJ1	71	75.468	Latimeria_chalumnae
ENSMAMG00000013404	synj1	90	68.373	ENSLOCG00000009230	synj1	98	66.815	Lepisosteus_oculatus
ENSMAMG00000013404	synj1	88	62.094	ENSLAFG00000011806	SYNJ1	85	64.571	Loxodonta_africana
ENSMAMG00000013404	synj1	87	64.501	ENSMFAG00000018883	SYNJ1	99	66.182	Macaca_fascicularis
ENSMAMG00000013404	synj1	89	62.062	ENSMMUG00000004624	SYNJ1	99	67.038	Macaca_mulatta
ENSMAMG00000013404	synj1	89	65.617	ENSMNEG00000040077	SYNJ1	94	66.889	Macaca_nemestrina
ENSMAMG00000013404	synj1	89	65.392	ENSMLEG00000037029	SYNJ1	99	67.315	Mandrillus_leucophaeus
ENSMAMG00000013404	synj1	100	88.051	ENSMZEG00005024358	synj1	100	92.430	Maylandia_zebra
ENSMAMG00000013404	synj1	88	62.956	ENSMGAG00000014522	SYNJ1	84	66.112	Meleagris_gallopavo
ENSMAMG00000013404	synj1	78	68.736	ENSMAUG00000009743	Synj1	100	82.734	Mesocricetus_auratus
ENSMAMG00000013404	synj1	89	65.550	ENSMICG00000034953	SYNJ1	99	69.681	Microcebus_murinus
ENSMAMG00000013404	synj1	80	84.784	ENSMMOG00000010203	synj1	99	87.006	Mola_mola
ENSMAMG00000013404	synj1	65	72.886	ENSMODG00000021073	SYNJ1	82	72.836	Monodelphis_domestica
ENSMAMG00000013404	synj1	100	87.976	ENSMALG00000014015	synj1	100	88.095	Monopterus_albus
ENSMAMG00000013404	synj1	88	62.956	MGP_CAROLIEiJ_G0020951	Synj1	100	83.022	Mus_caroli
ENSMAMG00000013404	synj1	88	63.130	ENSMUSG00000022973	Synj1	100	83.022	Mus_musculus
ENSMAMG00000013404	synj1	89	62.022	MGP_PahariEiJ_G0016656	Synj1	100	83.022	Mus_pahari
ENSMAMG00000013404	synj1	96	58.993	MGP_SPRETEiJ_G0021857	Synj1	100	83.165	Mus_spretus
ENSMAMG00000013404	synj1	88	63.526	ENSMPUG00000001153	SYNJ1	85	66.424	Mustela_putorius_furo
ENSMAMG00000013404	synj1	57	56.566	ENSMLUG00000005764	-	78	58.407	Myotis_lucifugus
ENSMAMG00000013404	synj1	76	68.113	ENSNGAG00000000453	Synj1	100	82.878	Nannospalax_galili
ENSMAMG00000013404	synj1	100	81.227	ENSNBRG00000011936	synj1	99	84.307	Neolamprologus_brichardi
ENSMAMG00000013404	synj1	78	61.982	ENSNLEG00000003734	SYNJ1	98	64.049	Nomascus_leucogenys
ENSMAMG00000013404	synj1	64	70.107	ENSMEUG00000004158	-	65	63.532	Notamacropus_eugenii
ENSMAMG00000013404	synj1	81	77.939	ENSOPRG00000013602	SYNJ1	77	77.939	Ochotona_princeps
ENSMAMG00000013404	synj1	88	83.178	ENSONIG00000004667	synj1	100	81.626	Oreochromis_niloticus
ENSMAMG00000013404	synj1	75	65.023	ENSOANG00000006929	SYNJ1	76	69.941	Ornithorhynchus_anatinus
ENSMAMG00000013404	synj1	95	58.409	ENSOCUG00000001420	SYNJ1	67	77.469	Oryctolagus_cuniculus
ENSMAMG00000013404	synj1	99	83.804	ENSORLG00000004320	synj1	100	87.151	Oryzias_latipes
ENSMAMG00000013404	synj1	80	85.660	ENSORLG00020011994	synj1	98	83.507	Oryzias_latipes_hni
ENSMAMG00000013404	synj1	98	84.116	ENSORLG00015018077	synj1	95	83.292	Oryzias_latipes_hsok
ENSMAMG00000013404	synj1	98	84.030	ENSOMEG00000014322	synj1	99	87.351	Oryzias_melastigma
ENSMAMG00000013404	synj1	89	60.026	ENSOGAG00000006010	SYNJ1	83	63.086	Otolemur_garnettii
ENSMAMG00000013404	synj1	88	63.612	ENSOARG00000013414	SYNJ1	95	63.668	Ovis_aries
ENSMAMG00000013404	synj1	89	65.818	ENSPPAG00000026784	SYNJ1	99	67.464	Pan_paniscus
ENSMAMG00000013404	synj1	88	66.416	ENSPPRG00000023469	SYNJ1	99	67.669	Panthera_pardus
ENSMAMG00000013404	synj1	88	66.484	ENSPTIG00000007930	SYNJ1	99	67.744	Panthera_tigris_altaica
ENSMAMG00000013404	synj1	89	63.896	ENSPTRG00000023787	SYNJ1	99	69.697	Pan_troglodytes
ENSMAMG00000013404	synj1	89	65.818	ENSPTRG00000048135	-	99	69.697	Pan_troglodytes
ENSMAMG00000013404	synj1	88	66.416	ENSPANG00000022531	SYNJ1	99	67.390	Papio_anubis
ENSMAMG00000013404	synj1	66	85.923	ENSPKIG00000022603	synj1	97	79.366	Paramormyrops_kingsleyae
ENSMAMG00000013404	synj1	94	90.568	ENSPMGG00000016831	synj1	99	89.601	Periophthalmus_magnuspinnatus
ENSMAMG00000013404	synj1	78	69.096	ENSPEMG00000018767	Synj1	100	83.309	Peromyscus_maniculatus_bairdii
ENSMAMG00000013404	synj1	62	59.441	ENSPMAG00000002887	synj1	74	60.782	Petromyzon_marinus
ENSMAMG00000013404	synj1	77	69.356	ENSPCIG00000016372	SYNJ1	82	75.138	Phascolarctos_cinereus
ENSMAMG00000013404	synj1	79	88.761	ENSPFOG00000016886	synj1	100	89.585	Poecilia_formosa
ENSMAMG00000013404	synj1	99	82.679	ENSPLAG00000017559	synj1	100	88.317	Poecilia_latipinna
ENSMAMG00000013404	synj1	99	82.738	ENSPMEG00000007643	synj1	100	83.254	Poecilia_mexicana
ENSMAMG00000013404	synj1	99	84.029	ENSPREG00000012412	synj1	100	87.932	Poecilia_reticulata
ENSMAMG00000013404	synj1	81	66.114	ENSPPYG00000011365	SYNJ1	96	65.751	Pongo_abelii
ENSMAMG00000013404	synj1	63	84.286	ENSPCAG00000009906	SYNJ1	55	84.286	Procavia_capensis
ENSMAMG00000013404	synj1	83	76.382	ENSPCOG00000024841	SYNJ1	94	75.616	Propithecus_coquereli
ENSMAMG00000013404	synj1	88	59.656	ENSPVAG00000000892	SYNJ1	82	65.134	Pteropus_vampyrus
ENSMAMG00000013404	synj1	100	82.382	ENSPNYG00000022989	synj1	100	90.909	Pundamilia_nyererei
ENSMAMG00000013404	synj1	66	89.488	ENSPNAG00000021119	synj1	91	89.111	Pygocentrus_nattereri
ENSMAMG00000013404	synj1	96	59.445	ENSRNOG00000002051	Synj1	99	68.703	Rattus_norvegicus
ENSMAMG00000013404	synj1	97	61.873	ENSRBIG00000034477	SYNJ1	99	67.315	Rhinopithecus_bieti
ENSMAMG00000013404	synj1	97	63.340	ENSRROG00000039256	SYNJ1	99	67.240	Rhinopithecus_roxellana
ENSMAMG00000013404	synj1	89	63.915	ENSSBOG00000021001	SYNJ1	99	67.115	Saimiri_boliviensis_boliviensis
ENSMAMG00000013404	synj1	76	66.591	ENSSHAG00000008538	SYNJ1	83	65.950	Sarcophilus_harrisii
ENSMAMG00000013404	synj1	100	74.491	ENSSFOG00015006095	synj1	100	73.457	Scleropages_formosus
ENSMAMG00000013404	synj1	100	81.481	ENSSMAG00000018066	synj1	98	90.299	Scophthalmus_maximus
ENSMAMG00000013404	synj1	100	90.109	ENSSDUG00000013058	synj1	100	90.413	Seriola_dumerili
ENSMAMG00000013404	synj1	100	89.553	ENSSLDG00000021406	synj1	100	92.803	Seriola_lalandi_dorsalis
ENSMAMG00000013404	synj1	98	60.255	ENSSPUG00000012552	SYNJ1	84	68.266	Sphenodon_punctatus
ENSMAMG00000013404	synj1	96	88.510	ENSSPAG00000006812	SYNJ1	100	88.833	Stegastes_partitus
ENSMAMG00000013404	synj1	90	90.534	ENSSPAG00000017029	synj1	99	92.097	Stegastes_partitus
ENSMAMG00000013404	synj1	88	64.566	ENSSSCG00000012035	SYNJ1	99	67.144	Sus_scrofa
ENSMAMG00000013404	synj1	99	57.784	ENSTGUG00000013445	SYNJ1	85	67.634	Taeniopygia_guttata
ENSMAMG00000013404	synj1	99	77.744	ENSTRUG00000006907	synj1	97	85.964	Takifugu_rubripes
ENSMAMG00000013404	synj1	87	76.273	ENSTNIG00000009940	synj1	99	80.233	Tetraodon_nigroviridis
ENSMAMG00000013404	synj1	82	82.595	ENSTBEG00000016298	SYNJ1	78	82.595	Tupaia_belangeri
ENSMAMG00000013404	synj1	88	58.067	ENSTTRG00000002222	SYNJ1	71	69.419	Tursiops_truncatus
ENSMAMG00000013404	synj1	88	66.507	ENSUAMG00000018606	SYNJ1	98	79.937	Ursus_americanus
ENSMAMG00000013404	synj1	86	76.524	ENSUMAG00000018419	SYNJ1	99	79.471	Ursus_maritimus
ENSMAMG00000013404	synj1	87	84.286	ENSVPAG00000001241	SYNJ1	68	84.286	Vicugna_pacos
ENSMAMG00000013404	synj1	88	63.783	ENSVVUG00000023125	SYNJ1	99	65.818	Vulpes_vulpes
ENSMAMG00000013404	synj1	91	59.536	ENSXETG00000009899	synj1	86	63.798	Xenopus_tropicalis
ENSMAMG00000013404	synj1	79	87.250	ENSXCOG00000011896	synj1	99	88.889	Xiphophorus_couchianus
ENSMAMG00000013404	synj1	99	82.791	ENSXMAG00000017524	synj1	100	89.478	Xiphophorus_maculatus