EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000013654 (Gene tree)
Gene ID: 113126079
Gene Symbol: tdp2b
Alias: tdp2|ttrap|ttrapl
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 5581 bases
Position: chrOOHQ01000103.1:12212981-12218561
Accession: 113126079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000020328	Exo_endo_phos	PF03372.23	3.4e-06	1	1
ENSMAMP00000020295	Exo_endo_phos	PF03372.23	3.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000020829	-	2434	-	ENSMAMP00000020295	360 (aa)	XP_026155669	UPI000E465FE0
ENSMAMT00000020863	-	1074	-	ENSMAMP00000020328	357 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000013654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000013654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000013654	tdp2b	94	54.386	ENSG00000111802	TDP2	91	55.755	Homo_sapiens
ENSMAMG00000013654	tdp2b	70	68.254	ENSAPOG00000018379	-	89	68.254	Acanthochromis_polyacanthus
ENSMAMG00000013654	tdp2b	73	57.303	ENSAMEG00000010230	TDP2	95	57.303	Ailuropoda_melanoleuca
ENSMAMG00000013654	tdp2b	50	64.045	ENSAOCG00000010081	-	78	64.045	Amphiprion_ocellaris
ENSMAMG00000013654	tdp2b	71	65.490	ENSAPEG00000004208	-	91	65.490	Amphiprion_percula
ENSMAMG00000013654	tdp2b	83	58.224	ENSATEG00000010663	-	99	58.224	Anabas_testudineus
ENSMAMG00000013654	tdp2b	94	53.198	ENSACAG00000002332	TDP2	92	53.295	Anolis_carolinensis
ENSMAMG00000013654	tdp2b	95	54.706	ENSANAG00000020033	TDP2	93	54.706	Aotus_nancymaae
ENSMAMG00000013654	tdp2b	73	72.624	ENSACLG00000016148	tdp2b	94	72.624	Astatotilapia_calliptera
ENSMAMG00000013654	tdp2b	78	67.586	ENSACLG00000016132	tdp2b	98	67.586	Astatotilapia_calliptera
ENSMAMG00000013654	tdp2b	76	68.459	ENSACLG00000016174	tdp2b	96	66.783	Astatotilapia_calliptera
ENSMAMG00000013654	tdp2b	95	64.865	ENSAMXG00000011775	tdp2b	97	64.865	Astyanax_mexicanus
ENSMAMG00000013654	tdp2b	78	50.530	ENSAMXG00000036549	tdp2a	88	50.530	Astyanax_mexicanus
ENSMAMG00000013654	tdp2b	94	52.422	ENSBTAG00000000365	TDP2	92	52.722	Bos_taurus
ENSMAMG00000013654	tdp2b	95	55.523	ENSCJAG00000006074	TDP2	93	55.523	Callithrix_jacchus
ENSMAMG00000013654	tdp2b	95	55.102	ENSCJAG00000021963	-	93	55.102	Callithrix_jacchus
ENSMAMG00000013654	tdp2b	94	54.810	ENSCAFG00000010428	TDP2	98	54.810	Canis_familiaris
ENSMAMG00000013654	tdp2b	73	58.427	ENSCAFG00020009994	TDP2	91	58.427	Canis_lupus_dingo
ENSMAMG00000013654	tdp2b	76	55.396	ENSCHIG00000015294	-	90	56.506	Capra_hircus
ENSMAMG00000013654	tdp2b	86	52.903	ENSTSYG00000037199	TDP2	98	52.903	Carlito_syrichta
ENSMAMG00000013654	tdp2b	94	54.070	ENSCPOG00000006390	TDP2	93	54.070	Cavia_porcellus
ENSMAMG00000013654	tdp2b	95	54.942	ENSCCAG00000022734	TDP2	93	54.942	Cebus_capucinus
ENSMAMG00000013654	tdp2b	94	54.971	ENSCATG00000022076	TDP2	87	57.303	Cercocebus_atys
ENSMAMG00000013654	tdp2b	95	54.391	ENSCLAG00000002072	TDP2	95	54.391	Chinchilla_lanigera
ENSMAMG00000013654	tdp2b	94	55.294	ENSCSAG00000007769	TDP2	93	55.294	Chlorocebus_sabaeus
ENSMAMG00000013654	tdp2b	94	53.757	ENSCPBG00000006551	TDP2	85	53.757	Chrysemys_picta_bellii
ENSMAMG00000013654	tdp2b	94	54.094	ENSCANG00000040122	TDP2	93	54.412	Colobus_angolensis_palliatus
ENSMAMG00000013654	tdp2b	94	49.280	ENSCGRG00001000384	Tdp2	90	49.280	Cricetulus_griseus_chok1gshd
ENSMAMG00000013654	tdp2b	94	48.538	ENSCGRG00000010250	Tdp2	92	49.128	Cricetulus_griseus_crigri
ENSMAMG00000013654	tdp2b	99	74.860	ENSCVAG00000003114	tdp2b	99	74.860	Cyprinodon_variegatus
ENSMAMG00000013654	tdp2b	73	50.000	ENSDARG00000069941	tdp2a	59	49.442	Danio_rerio
ENSMAMG00000013654	tdp2b	95	65.753	ENSDARG00000035954	tdp2b	95	65.753	Danio_rerio
ENSMAMG00000013654	tdp2b	94	54.624	ENSDNOG00000044082	TDP2	91	54.624	Dasypus_novemcinctus
ENSMAMG00000013654	tdp2b	76	56.884	ENSETEG00000019096	TDP2	99	56.884	Echinops_telfairi
ENSMAMG00000013654	tdp2b	70	45.817	ENSEBUG00000006535	tdp2a	59	45.817	Eptatretus_burgeri
ENSMAMG00000013654	tdp2b	94	52.149	ENSEASG00005007656	TDP2	92	52.450	Equus_asinus_asinus
ENSMAMG00000013654	tdp2b	94	52.647	ENSECAG00000014264	TDP2	92	52.959	Equus_caballus
ENSMAMG00000013654	tdp2b	94	54.142	ENSEEUG00000010776	TDP2	92	54.142	Erinaceus_europaeus
ENSMAMG00000013654	tdp2b	97	69.519	ENSELUG00000016449	tdp2b	98	69.519	Esox_lucius
ENSMAMG00000013654	tdp2b	81	45.890	ENSELUG00000009321	tdp2a	87	44.595	Esox_lucius
ENSMAMG00000013654	tdp2b	98	52.632	ENSFCAG00000025612	TDP2	96	52.632	Felis_catus
ENSMAMG00000013654	tdp2b	97	50.423	ENSFALG00000004710	TDP2	97	50.000	Ficedula_albicollis
ENSMAMG00000013654	tdp2b	73	58.427	ENSFDAG00000006512	TDP2	91	58.427	Fukomys_damarensis
ENSMAMG00000013654	tdp2b	71	60.236	ENSFHEG00000013560	-	87	60.236	Fundulus_heteroclitus
ENSMAMG00000013654	tdp2b	95	52.023	ENSGALG00000013637	TDP2	90	52.522	Gallus_gallus
ENSMAMG00000013654	tdp2b	94	54.335	ENSGAGG00000002853	TDP2	85	54.335	Gopherus_agassizii
ENSMAMG00000013654	tdp2b	94	54.706	ENSGGOG00000014237	TDP2	91	55.755	Gorilla_gorilla
ENSMAMG00000013654	tdp2b	99	77.437	ENSHBUG00000002714	tdp2b	99	77.437	Haplochromis_burtoni
ENSMAMG00000013654	tdp2b	57	73.301	ENSHBUG00000005421	-	98	66.667	Haplochromis_burtoni
ENSMAMG00000013654	tdp2b	94	55.523	ENSHGLG00000008655	TDP2	92	55.523	Heterocephalus_glaber_female
ENSMAMG00000013654	tdp2b	94	55.523	ENSHGLG00100019087	TDP2	92	55.523	Heterocephalus_glaber_male
ENSMAMG00000013654	tdp2b	98	66.757	ENSIPUG00000013691	tdp2b	98	67.120	Ictalurus_punctatus
ENSMAMG00000013654	tdp2b	97	48.023	ENSJJAG00000021685	Tdp2	98	48.023	Jaculus_jaculus
ENSMAMG00000013654	tdp2b	71	64.173	ENSKMAG00000015485	-	82	64.173	Kryptolebias_marmoratus
ENSMAMG00000013654	tdp2b	95	53.736	ENSLACG00000008852	TDP2	94	53.736	Latimeria_chalumnae
ENSMAMG00000013654	tdp2b	75	64.493	ENSLOCG00000005817	tdp2b	99	64.260	Lepisosteus_oculatus
ENSMAMG00000013654	tdp2b	94	54.441	ENSLAFG00000002567	TDP2	94	54.467	Loxodonta_africana
ENSMAMG00000013654	tdp2b	94	54.971	ENSMFAG00000045296	TDP2	93	55.294	Macaca_fascicularis
ENSMAMG00000013654	tdp2b	94	54.971	ENSMMUG00000009803	TDP2	93	55.294	Macaca_mulatta
ENSMAMG00000013654	tdp2b	94	54.971	ENSMNEG00000038003	TDP2	93	55.294	Macaca_nemestrina
ENSMAMG00000013654	tdp2b	94	54.971	ENSMLEG00000028883	TDP2	93	55.294	Mandrillus_leucophaeus
ENSMAMG00000013654	tdp2b	77	63.986	ENSMZEG00005004103	tdp2b	96	63.986	Maylandia_zebra
ENSMAMG00000013654	tdp2b	76	69.853	ENSMZEG00005004126	tdp2b	98	67.133	Maylandia_zebra
ENSMAMG00000013654	tdp2b	68	62.451	ENSMZEG00005003980	-	82	62.451	Maylandia_zebra
ENSMAMG00000013654	tdp2b	99	76.602	ENSMZEG00005003950	tdp2b	99	76.602	Maylandia_zebra
ENSMAMG00000013654	tdp2b	81	69.310	ENSMZEG00005004077	tdp2b	98	69.310	Maylandia_zebra
ENSMAMG00000013654	tdp2b	70	72.000	ENSMZEG00005004055	tdp2b	83	72.000	Maylandia_zebra
ENSMAMG00000013654	tdp2b	76	68.978	ENSMZEG00005004153	tdp2b	97	68.978	Maylandia_zebra
ENSMAMG00000013654	tdp2b	95	52.890	ENSMGAG00000008014	TDP2	89	53.198	Meleagris_gallopavo
ENSMAMG00000013654	tdp2b	94	49.853	ENSMAUG00000014451	Tdp2	89	49.853	Mesocricetus_auratus
ENSMAMG00000013654	tdp2b	94	53.869	ENSMICG00000000039	TDP2	95	55.124	Microcebus_murinus
ENSMAMG00000013654	tdp2b	94	51.453	ENSMOCG00000002823	Tdp2	89	51.453	Microtus_ochrogaster
ENSMAMG00000013654	tdp2b	84	56.270	ENSMODG00000011653	TDP2	94	56.958	Monodelphis_domestica
ENSMAMG00000013654	tdp2b	71	67.323	ENSMALG00000005368	-	86	67.323	Monopterus_albus
ENSMAMG00000013654	tdp2b	94	51.032	MGP_CAROLIEiJ_G0018354	Tdp2	93	49.020	Mus_caroli
ENSMAMG00000013654	tdp2b	94	50.000	ENSMUSG00000035958	Tdp2	93	48.864	Mus_musculus
ENSMAMG00000013654	tdp2b	94	49.558	MGP_PahariEiJ_G0019417	Tdp2	93	47.486	Mus_pahari
ENSMAMG00000013654	tdp2b	96	48.459	MGP_SPRETEiJ_G0019220	Tdp2	92	48.459	Mus_spretus
ENSMAMG00000013654	tdp2b	94	53.757	ENSMPUG00000004516	TDP2	98	52.778	Mustela_putorius_furo
ENSMAMG00000013654	tdp2b	93	51.026	ENSMLUG00000013506	TDP2	91	51.613	Myotis_lucifugus
ENSMAMG00000013654	tdp2b	94	50.725	ENSNGAG00000001375	Tdp2	91	50.725	Nannospalax_galili
ENSMAMG00000013654	tdp2b	94	54.706	ENSNLEG00000002447	TDP2	94	54.706	Nomascus_leucogenys
ENSMAMG00000013654	tdp2b	94	55.271	ENSOPRG00000016299	TDP2	96	55.271	Ochotona_princeps
ENSMAMG00000013654	tdp2b	73	58.427	ENSODEG00000014018	TDP2	90	58.427	Octodon_degus
ENSMAMG00000013654	tdp2b	94	54.441	ENSOCUG00000013773	TDP2	93	54.441	Oryctolagus_cuniculus
ENSMAMG00000013654	tdp2b	75	58.456	ENSORLG00000001661	-	99	58.456	Oryzias_latipes
ENSMAMG00000013654	tdp2b	75	58.456	ENSORLG00020004634	-	99	58.456	Oryzias_latipes_hni
ENSMAMG00000013654	tdp2b	75	49.265	ENSORLG00015008190	-	99	49.265	Oryzias_latipes_hsok
ENSMAMG00000013654	tdp2b	72	58.301	ENSOMEG00000015899	-	93	57.143	Oryzias_melastigma
ENSMAMG00000013654	tdp2b	94	54.942	ENSOGAG00000025303	TDP2	91	54.046	Otolemur_garnettii
ENSMAMG00000013654	tdp2b	94	54.386	ENSPPAG00000029023	TDP2	91	55.755	Pan_paniscus
ENSMAMG00000013654	tdp2b	98	52.355	ENSPPRG00000015398	TDP2	96	52.355	Panthera_pardus
ENSMAMG00000013654	tdp2b	76	55.072	ENSPTIG00000018574	TDP2	94	55.072	Panthera_tigris_altaica
ENSMAMG00000013654	tdp2b	94	54.386	ENSPTRG00000017778	TDP2	91	55.755	Pan_troglodytes
ENSMAMG00000013654	tdp2b	94	54.706	ENSPANG00000017590	TDP2	93	55.102	Papio_anubis
ENSMAMG00000013654	tdp2b	98	65.753	ENSPKIG00000006483	tdp2b	98	65.753	Paramormyrops_kingsleyae
ENSMAMG00000013654	tdp2b	78	55.477	ENSPSIG00000004948	TDP2	97	55.477	Pelodiscus_sinensis
ENSMAMG00000013654	tdp2b	96	50.571	ENSPEMG00000001788	Tdp2	92	50.142	Peromyscus_maniculatus_bairdii
ENSMAMG00000013654	tdp2b	70	42.264	ENSPMAG00000001570	tdp2b	96	43.019	Petromyzon_marinus
ENSMAMG00000013654	tdp2b	95	56.176	ENSPCIG00000007316	TDP2	91	55.085	Phascolarctos_cinereus
ENSMAMG00000013654	tdp2b	71	59.843	ENSPFOG00000017990	-	91	59.843	Poecilia_formosa
ENSMAMG00000013654	tdp2b	71	59.449	ENSPLAG00000019439	-	80	59.449	Poecilia_latipinna
ENSMAMG00000013654	tdp2b	79	55.986	ENSPMEG00000010824	-	92	55.986	Poecilia_mexicana
ENSMAMG00000013654	tdp2b	94	54.386	ENSPPYG00000016282	TDP2	85	54.386	Pongo_abelii
ENSMAMG00000013654	tdp2b	94	54.464	ENSPCOG00000021415	TDP2	92	56.226	Propithecus_coquereli
ENSMAMG00000013654	tdp2b	55	58.794	ENSPNYG00000001944	-	81	58.586	Pundamilia_nyererei
ENSMAMG00000013654	tdp2b	79	64.094	ENSPNYG00000011504	tdp2b	97	64.094	Pundamilia_nyererei
ENSMAMG00000013654	tdp2b	99	74.373	ENSPNYG00000011532	tdp2b	99	74.373	Pundamilia_nyererei
ENSMAMG00000013654	tdp2b	79	53.191	ENSPNAG00000022162	tdp2a	70	53.191	Pygocentrus_nattereri
ENSMAMG00000013654	tdp2b	92	51.488	ENSRNOG00000018246	Tdp2	89	51.032	Rattus_norvegicus
ENSMAMG00000013654	tdp2b	94	54.386	ENSRBIG00000037119	TDP2	93	54.706	Rhinopithecus_bieti
ENSMAMG00000013654	tdp2b	94	54.094	ENSRROG00000005025	TDP2	91	55.396	Rhinopithecus_roxellana
ENSMAMG00000013654	tdp2b	95	54.651	ENSSBOG00000028734	TDP2	87	56.929	Saimiri_boliviensis_boliviensis
ENSMAMG00000013654	tdp2b	99	53.804	ENSSHAG00000002506	TDP2	95	53.804	Sarcophilus_harrisii
ENSMAMG00000013654	tdp2b	76	56.522	ENSSFOG00015011322	-	72	56.522	Scleropages_formosus
ENSMAMG00000013654	tdp2b	70	56.522	ENSSARG00000013547	TDP2	90	56.522	Sorex_araneus
ENSMAMG00000013654	tdp2b	95	51.289	ENSSPUG00000008288	TDP2	94	51.289	Sphenodon_punctatus
ENSMAMG00000013654	tdp2b	94	54.386	ENSSSCG00000001092	TDP2	92	54.706	Sus_scrofa
ENSMAMG00000013654	tdp2b	74	55.682	ENSTGUG00000009035	TDP2	98	55.682	Taeniopygia_guttata
ENSMAMG00000013654	tdp2b	74	60.606	ENSTRUG00000012218	-	91	60.606	Takifugu_rubripes
ENSMAMG00000013654	tdp2b	100	77.839	ENSTRUG00000014347	tdp2b	100	77.839	Takifugu_rubripes
ENSMAMG00000013654	tdp2b	100	75.623	ENSTNIG00000017792	tdp2b	99	75.623	Tetraodon_nigroviridis
ENSMAMG00000013654	tdp2b	72	62.452	ENSTNIG00000010260	TDP2	99	62.452	Tetraodon_nigroviridis
ENSMAMG00000013654	tdp2b	94	53.602	ENSTTRG00000016376	TDP2	92	54.755	Tursiops_truncatus
ENSMAMG00000013654	tdp2b	98	51.268	ENSUAMG00000025939	TDP2	97	51.268	Ursus_americanus
ENSMAMG00000013654	tdp2b	73	57.678	ENSUMAG00000020111	TDP2	88	57.678	Ursus_maritimus
ENSMAMG00000013654	tdp2b	94	53.803	ENSXETG00000014826	tdp2	93	53.803	Xenopus_tropicalis
ENSMAMG00000013654	tdp2b	71	58.594	ENSXCOG00000010778	-	71	58.594	Xiphophorus_couchianus
ENSMAMG00000013654	tdp2b	71	58.984	ENSXMAG00000022252	-	74	58.984	Xiphophorus_maculatus