EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000013955 (Gene tree)
Gene ID: 113130419
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 3119 bases
Position: chrOOHQ01000082.1:4093842-4096960
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000020734	MMR_HSR1	PF01926.23	2e-05	1	1
ENSMAMP00000020747	MMR_HSR1	PF01926.23	3.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000021272	-	540	-	ENSMAMP00000020734	179 (aa)	-	-
ENSMAMT00000021285	-	1399	-	ENSMAMP00000020747	200 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000013955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000013955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000013955	-	75	34.307	ENSMAMG00000013640	arl8a	75	33.333
ENSMAMG00000013955	-	93	49.405	ENSMAMG00000001968	arl1	94	49.405
ENSMAMG00000013955	-	98	44.886	ENSMAMG00000004884	arl8	98	44.886
ENSMAMG00000013955	-	98	67.232	ENSMAMG00000001553	-	98	67.232
ENSMAMG00000013955	-	69	31.783	ENSMAMG00000001408	rab1ba	62	31.783
ENSMAMG00000013955	-	91	30.286	ENSMAMG00000021732	sar1b	88	30.286
ENSMAMG00000013955	-	94	41.176	ENSMAMG00000007434	arl3l2	85	41.176
ENSMAMG00000013955	-	89	43.125	ENSMAMG00000012951	-	88	43.125
ENSMAMG00000013955	-	98	67.232	ENSMAMG00000006781	-	98	67.232
ENSMAMG00000013955	-	93	44.944	ENSMAMG00000011635	arl4aa	89	44.944
ENSMAMG00000013955	-	87	41.975	ENSMAMG00000011773	arl14	81	41.975
ENSMAMG00000013955	-	98	30.964	ENSMAMG00000021314	sar1ab	99	30.964
ENSMAMG00000013955	-	72	30.370	ENSMAMG00000018672	rab34a	52	30.370
ENSMAMG00000013955	-	75	32.847	ENSMAMG00000016958	arl8ba	79	32.847
ENSMAMG00000013955	-	89	42.857	ENSMAMG00000008610	arl2	88	42.857
ENSMAMG00000013955	-	63	30.579	ENSMAMG00000019230	si:dkey-16l2.16	56	30.579
ENSMAMG00000013955	-	87	46.835	ENSMAMG00000003944	arl11	91	46.835
ENSMAMG00000013955	-	99	47.568	ENSMAMG00000013367	arl4cb	94	47.568
ENSMAMG00000013955	-	100	64.444	ENSMAMG00000016208	-	100	64.444
ENSMAMG00000013955	-	98	67.232	ENSMAMG00000001681	arf3b	98	67.232
ENSMAMG00000013955	-	100	35.751	ENSMAMG00000019501	arfrp1	95	35.751
ENSMAMG00000013955	-	98	46.196	ENSMAMG00000022482	-	92	46.196
ENSMAMG00000013955	-	99	43.820	ENSMAMG00000022157	arl5c	99	43.820
ENSMAMG00000013955	-	100	67.222	ENSMAMG00000008223	-	100	67.222
ENSMAMG00000013955	-	91	40.120	ENSMAMG00000002718	ARL6	90	40.120
ENSMAMG00000013955	-	98	44.633	ENSMAMG00000019876	arl5a	98	44.633
ENSMAMG00000013955	-	75	34.307	ENSMAMG00000023379	arl8bb	73	34.307
ENSMAMG00000013955	-	89	42.500	ENSMAMG00000002666	arl3	84	42.500
ENSMAMG00000013955	-	98	68.362	ENSMAMG00000021160	arf5	98	68.362
ENSMAMG00000013955	-	94	66.864	ENSMAMG00000008079	arf2b	60	66.864
ENSMAMG00000013955	-	88	38.068	ENSMAMG00000018088	-	92	36.757
ENSMAMG00000013955	-	85	53.205	ENSMAMG00000012474	-	75	53.205

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000013955	-	100	84.358	ENSAPEG00000002838	-	100	84.358	Amphiprion_percula
ENSMAMG00000013955	-	90	85.093	ENSATEG00000003808	-	93	86.503	Anabas_testudineus
ENSMAMG00000013955	-	99	88.764	ENSATEG00000003847	-	99	88.764	Anabas_testudineus
ENSMAMG00000013955	-	95	84.118	ENSACLG00000009822	-	91	84.118	Astatotilapia_calliptera
ENSMAMG00000013955	-	82	76.027	ENSCVAG00000013902	-	91	77.027	Cyprinodon_variegatus
ENSMAMG00000013955	-	88	84.076	ENSFHEG00000019659	-	93	82.927	Fundulus_heteroclitus
ENSMAMG00000013955	-	60	89.815	ENSGAFG00000002801	-	96	89.815	Gambusia_affinis
ENSMAMG00000013955	-	99	88.268	ENSGACG00000003831	-	99	88.268	Gasterosteus_aculeatus
ENSMAMG00000013955	-	99	80.899	ENSHBUG00000001250	-	99	80.899	Haplochromis_burtoni
ENSMAMG00000013955	-	98	88.068	ENSLBEG00000027205	-	99	88.068	Labrus_bergylta
ENSMAMG00000013955	-	99	83.146	ENSMZEG00005016274	-	99	83.146	Maylandia_zebra
ENSMAMG00000013955	-	99	83.146	ENSMZEG00005016277	-	99	83.146	Maylandia_zebra
ENSMAMG00000013955	-	100	81.564	ENSMMOG00000013651	-	99	81.564	Mola_mola
ENSMAMG00000013955	-	99	81.461	ENSONIG00000004340	-	99	81.461	Oreochromis_niloticus
ENSMAMG00000013955	-	100	83.799	ENSPLAG00000015887	-	100	83.799	Poecilia_latipinna
ENSMAMG00000013955	-	100	83.799	ENSPMEG00000007064	-	100	83.799	Poecilia_mexicana
ENSMAMG00000013955	-	96	84.795	ENSPREG00000000912	-	100	84.795	Poecilia_reticulata
ENSMAMG00000013955	-	99	73.077	ENSSMAG00000002487	-	99	73.077	Scophthalmus_maximus
ENSMAMG00000013955	-	100	84.358	ENSSDUG00000020599	-	100	84.358	Seriola_dumerili
ENSMAMG00000013955	-	100	83.799	ENSSLDG00000020097	-	100	83.799	Seriola_lalandi_dorsalis
ENSMAMG00000013955	-	100	86.034	ENSSPAG00000017484	-	98	88.415	Stegastes_partitus
ENSMAMG00000013955	-	89	76.101	ENSTRUG00000025171	-	98	76.101	Takifugu_rubripes
ENSMAMG00000013955	-	83	76.000	ENSTNIG00000018302	-	76	69.942	Tetraodon_nigroviridis
ENSMAMG00000013955	-	88	75.796	ENSTNIG00000000796	-	75	72.093	Tetraodon_nigroviridis
ENSMAMG00000013955	-	83	78.523	ENSTNIG00000001632	-	75	72.093	Tetraodon_nigroviridis
ENSMAMG00000013955	-	63	82.143	ENSTNIG00000005043	-	99	82.143	Tetraodon_nigroviridis
ENSMAMG00000013955	-	100	83.799	ENSXMAG00000029601	-	100	83.799	Xiphophorus_maculatus