EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000014294 (Gene tree)
Gene ID: 113127955
Gene Symbol: smarca5
Alias: SWI/SNF related|matrix associated|actin dependent regulator of chromatin A5|chunp6878|fb26d12|fb49g04|im:7146484|wu:fb26d12|wu:fb49g04|zgc:158434
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 10981 bases
Position: chrOOHQ01000044.1:6925392-6936372
Accession: 113127955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000021326	ResIII	PF04851.15	3.9e-11	1	1
ENSMAMP00000021326	DEAD	PF00270.29	4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000021871	-	6682	-	ENSMAMP00000021326	1039 (aa)	XP_026158694	UPI000E4609A3

Gene Model

Click here to download ENSMAMG00000014294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000014294's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000014294	smarca5	53	41.198	ENSMAMG00000012822	chd1l	63	40.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000014294	smarca5	96	82.583	ENSG00000102038	SMARCA1	93	83.707	Homo_sapiens
ENSMAMG00000014294	smarca5	100	97.979	ENSAPOG00000016035	smarca5	100	97.979	Acanthochromis_polyacanthus
ENSMAMG00000014294	smarca5	96	81.701	ENSAMEG00000015218	SMARCA1	93	82.696	Ailuropoda_melanoleuca
ENSMAMG00000014294	smarca5	87	98.335	ENSACIG00000016982	smarca5	100	98.335	Amphilophus_citrinellus
ENSMAMG00000014294	smarca5	100	97.979	ENSAOCG00000015578	smarca5	100	97.979	Amphiprion_ocellaris
ENSMAMG00000014294	smarca5	100	97.979	ENSAPEG00000011117	smarca5	99	99.409	Amphiprion_percula
ENSMAMG00000014294	smarca5	100	97.498	ENSATEG00000012894	smarca5	100	97.498	Anabas_testudineus
ENSMAMG00000014294	smarca5	94	84.114	ENSAPLG00000013149	SMARCA1	99	84.114	Anas_platyrhynchos
ENSMAMG00000014294	smarca5	98	82.307	ENSACAG00000011376	SMARCA1	94	84.623	Anolis_carolinensis
ENSMAMG00000014294	smarca5	96	77.778	ENSANAG00000023098	SMARCA1	93	78.819	Aotus_nancymaae
ENSMAMG00000014294	smarca5	100	97.498	ENSACLG00000025356	smarca5	100	97.498	Astatotilapia_calliptera
ENSMAMG00000014294	smarca5	98	92.203	ENSAMXG00000005709	smarca5	100	90.953	Astyanax_mexicanus
ENSMAMG00000014294	smarca5	89	84.748	ENSAMXG00000011227	smarca1	99	86.007	Astyanax_mexicanus
ENSMAMG00000014294	smarca5	94	83.384	ENSBTAG00000002292	SMARCA1	91	83.665	Bos_taurus
ENSMAMG00000014294	smarca5	96	63.215	WBGene00002169	isw-1	95	63.880	Caenorhabditis_elegans
ENSMAMG00000014294	smarca5	96	82.583	ENSCJAG00000002868	SMARCA1	93	83.707	Callithrix_jacchus
ENSMAMG00000014294	smarca5	96	73.425	ENSCAFG00000018673	SMARCA1	99	75.761	Canis_familiaris
ENSMAMG00000014294	smarca5	96	82.783	ENSCAFG00020001751	SMARCA1	93	83.809	Canis_lupus_dingo
ENSMAMG00000014294	smarca5	95	83.080	ENSCHIG00000009837	SMARCA1	92	83.401	Capra_hircus
ENSMAMG00000014294	smarca5	96	82.700	ENSTSYG00000004240	SMARCA1	94	84.688	Carlito_syrichta
ENSMAMG00000014294	smarca5	95	81.627	ENSCPOG00000013601	SMARCA1	93	82.186	Cavia_porcellus
ENSMAMG00000014294	smarca5	96	79.980	ENSCCAG00000030817	SMARCA1	93	81.059	Cebus_capucinus
ENSMAMG00000014294	smarca5	96	81.602	ENSCATG00000015921	SMARCA1	93	82.696	Cercocebus_atys
ENSMAMG00000014294	smarca5	95	82.323	ENSCLAG00000002171	SMARCA1	93	82.892	Chinchilla_lanigera
ENSMAMG00000014294	smarca5	96	82.583	ENSCSAG00000008460	SMARCA1	93	83.707	Chlorocebus_sabaeus
ENSMAMG00000014294	smarca5	95	84.093	ENSCPBG00000001146	SMARCA1	93	84.420	Chrysemys_picta_bellii
ENSMAMG00000014294	smarca5	95	74.277	ENSCING00000004110	swi/snf	98	75.177	Ciona_intestinalis
ENSMAMG00000014294	smarca5	96	73.909	ENSCSAVG00000004620	-	99	76.510	Ciona_savignyi
ENSMAMG00000014294	smarca5	96	82.683	ENSCANG00000007183	SMARCA1	93	83.809	Colobus_angolensis_palliatus
ENSMAMG00000014294	smarca5	95	81.919	ENSCGRG00001010776	Smarca1	93	82.485	Cricetulus_griseus_chok1gshd
ENSMAMG00000014294	smarca5	93	82.389	ENSCGRG00000015301	Smarca1	94	83.017	Cricetulus_griseus_crigri
ENSMAMG00000014294	smarca5	100	96.824	ENSCSEG00000000328	smarca5	100	96.824	Cynoglossus_semilaevis
ENSMAMG00000014294	smarca5	100	96.439	ENSCVAG00000008668	smarca5	99	97.521	Cyprinodon_variegatus
ENSMAMG00000014294	smarca5	100	91.066	ENSDARG00000052348	smarca5	100	90.664	Danio_rerio
ENSMAMG00000014294	smarca5	94	83.350	ENSDARG00000012776	smarca1	96	83.350	Danio_rerio
ENSMAMG00000014294	smarca5	93	83.954	ENSDNOG00000004315	SMARCA1	91	84.624	Dasypus_novemcinctus
ENSMAMG00000014294	smarca5	96	81.864	ENSDORG00000009270	Smarca1	90	84.624	Dipodomys_ordii
ENSMAMG00000014294	smarca5	94	74.772	FBgn0011604	Iswi	97	74.400	Drosophila_melanogaster
ENSMAMG00000014294	smarca5	78	81.818	ENSETEG00000017426	SMARCA1	83	81.818	Echinops_telfairi
ENSMAMG00000014294	smarca5	94	82.702	ENSEBUG00000001239	smarca5	96	82.702	Eptatretus_burgeri
ENSMAMG00000014294	smarca5	95	78.370	ENSEASG00005008218	SMARCA1	99	79.656	Equus_asinus_asinus
ENSMAMG00000014294	smarca5	95	83.131	ENSECAG00000012106	SMARCA1	92	83.707	Equus_caballus
ENSMAMG00000014294	smarca5	76	84.106	ENSEEUG00000014927	SMARCA1	80	84.106	Erinaceus_europaeus
ENSMAMG00000014294	smarca5	94	84.221	ENSELUG00000010515	smarca1	95	85.294	Esox_lucius
ENSMAMG00000014294	smarca5	96	82.600	ENSFCAG00000018496	SMARCA1	93	83.707	Felis_catus
ENSMAMG00000014294	smarca5	88	85.339	ENSFALG00000000209	SMARCA1	98	85.339	Ficedula_albicollis
ENSMAMG00000014294	smarca5	93	82.618	ENSFDAG00000009818	SMARCA1	94	83.246	Fukomys_damarensis
ENSMAMG00000014294	smarca5	100	94.952	ENSFHEG00000007687	smarca5	100	94.381	Fundulus_heteroclitus
ENSMAMG00000014294	smarca5	96	82.125	ENSGALG00000008431	SMARCA1	95	85.016	Gallus_gallus
ENSMAMG00000014294	smarca5	100	96.920	ENSGAFG00000017731	smarca5	100	96.920	Gambusia_affinis
ENSMAMG00000014294	smarca5	93	84.671	ENSGAGG00000023575	SMARCA1	99	84.671	Gopherus_agassizii
ENSMAMG00000014294	smarca5	70	96.000	ENSGGOG00000012841	-	92	80.000	Gorilla_gorilla
ENSMAMG00000014294	smarca5	95	82.222	ENSHGLG00000003080	SMARCA1	93	82.790	Heterocephalus_glaber_female
ENSMAMG00000014294	smarca5	95	81.727	ENSHGLG00100001102	SMARCA1	99	82.287	Heterocephalus_glaber_male
ENSMAMG00000014294	smarca5	100	96.827	ENSHCOG00000005458	smarca5	100	96.827	Hippocampus_comes
ENSMAMG00000014294	smarca5	96	82.522	ENSIPUG00000016905	Smarca1	99	84.426	Ictalurus_punctatus
ENSMAMG00000014294	smarca5	100	90.288	ENSIPUG00000005229	SMARCA5	99	92.270	Ictalurus_punctatus
ENSMAMG00000014294	smarca5	95	83.030	ENSSTOG00000014524	SMARCA1	95	83.113	Ictidomys_tridecemlineatus
ENSMAMG00000014294	smarca5	96	80.632	ENSJJAG00000002593	Smarca1	93	82.168	Jaculus_jaculus
ENSMAMG00000014294	smarca5	100	96.824	ENSKMAG00000003777	smarca5	100	96.824	Kryptolebias_marmoratus
ENSMAMG00000014294	smarca5	94	95.515	ENSLBEG00000013295	SMARCA1	100	97.975	Labrus_bergylta
ENSMAMG00000014294	smarca5	100	95.669	ENSLBEG00000018112	smarca5	100	95.573	Labrus_bergylta
ENSMAMG00000014294	smarca5	93	85.258	ENSLACG00000016697	SMARCA1	95	85.258	Latimeria_chalumnae
ENSMAMG00000014294	smarca5	94	85.918	ENSLOCG00000014591	smarca1	95	85.918	Lepisosteus_oculatus
ENSMAMG00000014294	smarca5	95	81.827	ENSLAFG00000000896	SMARCA1	98	82.389	Loxodonta_africana
ENSMAMG00000014294	smarca5	96	82.583	ENSMFAG00000002117	SMARCA1	94	84.762	Macaca_fascicularis
ENSMAMG00000014294	smarca5	96	81.602	ENSMMUG00000008818	SMARCA1	97	84.984	Macaca_mulatta
ENSMAMG00000014294	smarca5	95	82.644	ENSMNEG00000041768	SMARCA1	94	84.762	Macaca_nemestrina
ENSMAMG00000014294	smarca5	96	82.583	ENSMLEG00000043198	SMARCA1	93	83.707	Mandrillus_leucophaeus
ENSMAMG00000014294	smarca5	100	97.498	ENSMZEG00005009369	smarca5	100	97.498	Maylandia_zebra
ENSMAMG00000014294	smarca5	94	82.998	ENSMGAG00000007042	SMARCA1	98	82.998	Meleagris_gallopavo
ENSMAMG00000014294	smarca5	93	82.492	ENSMAUG00000008133	Smarca1	91	82.513	Mesocricetus_auratus
ENSMAMG00000014294	smarca5	95	83.434	ENSMICG00000015768	SMARCA1	93	84.012	Microcebus_murinus
ENSMAMG00000014294	smarca5	95	81.307	ENSMOCG00000009464	Smarca1	93	81.864	Microtus_ochrogaster
ENSMAMG00000014294	smarca5	96	96.389	ENSMMOG00000005547	smarca5	100	96.389	Mola_mola
ENSMAMG00000014294	smarca5	94	84.205	ENSMODG00000013187	-	94	84.205	Monodelphis_domestica
ENSMAMG00000014294	smarca5	100	97.305	ENSMALG00000002081	smarca5	100	97.305	Monopterus_albus
ENSMAMG00000014294	smarca5	95	81.608	MGP_CAROLIEiJ_G0033034	Smarca1	92	82.503	Mus_caroli
ENSMAMG00000014294	smarca5	95	81.709	ENSMUSG00000031099	Smarca1	93	82.270	Mus_musculus
ENSMAMG00000014294	smarca5	95	81.883	MGP_PahariEiJ_G0031579	Smarca1	92	82.551	Mus_pahari
ENSMAMG00000014294	smarca5	95	81.709	MGP_SPRETEiJ_G0034192	Smarca1	93	82.270	Mus_spretus
ENSMAMG00000014294	smarca5	96	81.800	ENSMPUG00000017423	SMARCA1	88	82.797	Mustela_putorius_furo
ENSMAMG00000014294	smarca5	95	80.976	ENSMLUG00000029614	SMARCA1	93	81.225	Myotis_lucifugus
ENSMAMG00000014294	smarca5	93	83.007	ENSNGAG00000006492	Smarca1	91	83.037	Nannospalax_galili
ENSMAMG00000014294	smarca5	96	98.195	ENSNBRG00000004463	smarca5	99	98.195	Neolamprologus_brichardi
ENSMAMG00000014294	smarca5	96	80.910	ENSNLEG00000015179	SMARCA1	94	84.038	Nomascus_leucogenys
ENSMAMG00000014294	smarca5	88	76.319	ENSMEUG00000008819	SMARCA1	97	76.319	Notamacropus_eugenii
ENSMAMG00000014294	smarca5	96	80.396	ENSODEG00000012163	SMARCA1	91	83.037	Octodon_degus
ENSMAMG00000014294	smarca5	100	97.594	ENSONIG00000009993	smarca5	100	97.594	Oreochromis_niloticus
ENSMAMG00000014294	smarca5	93	84.979	ENSOANG00000002862	SMARCA1	99	84.979	Ornithorhynchus_anatinus
ENSMAMG00000014294	smarca5	95	83.384	ENSOCUG00000001047	SMARCA1	93	83.707	Oryctolagus_cuniculus
ENSMAMG00000014294	smarca5	100	96.261	ENSORLG00000021998	smarca5	100	96.261	Oryzias_latipes
ENSMAMG00000014294	smarca5	100	96.353	ENSORLG00020017679	smarca5	100	96.353	Oryzias_latipes_hni
ENSMAMG00000014294	smarca5	100	96.638	ENSORLG00015017210	smarca5	100	96.638	Oryzias_latipes_hsok
ENSMAMG00000014294	smarca5	100	96.731	ENSOMEG00000000086	smarca5	100	96.731	Oryzias_melastigma
ENSMAMG00000014294	smarca5	92	83.676	ENSOGAG00000004399	SMARCA1	91	84.084	Otolemur_garnettii
ENSMAMG00000014294	smarca5	94	83.640	ENSOARG00000014638	SMARCA1	99	83.640	Ovis_aries
ENSMAMG00000014294	smarca5	96	82.583	ENSPPAG00000034647	SMARCA1	93	83.707	Pan_paniscus
ENSMAMG00000014294	smarca5	96	82.700	ENSPPRG00000008929	SMARCA1	93	83.809	Panthera_pardus
ENSMAMG00000014294	smarca5	96	80.924	ENSPTIG00000000915	SMARCA1	96	81.982	Panthera_tigris_altaica
ENSMAMG00000014294	smarca5	96	82.583	ENSPTRG00000049876	SMARCA1	93	82.696	Pan_troglodytes
ENSMAMG00000014294	smarca5	96	82.583	ENSPANG00000003871	SMARCA1	93	83.707	Papio_anubis
ENSMAMG00000014294	smarca5	95	81.846	ENSPKIG00000013411	smarca1	96	84.227	Paramormyrops_kingsleyae
ENSMAMG00000014294	smarca5	95	83.083	ENSPSIG00000010101	SMARCA1	99	84.671	Pelodiscus_sinensis
ENSMAMG00000014294	smarca5	93	82.801	ENSPEMG00000017503	Smarca1	91	82.827	Peromyscus_maniculatus_bairdii
ENSMAMG00000014294	smarca5	94	84.631	ENSPCIG00000015460	SMARCA1	96	84.631	Phascolarctos_cinereus
ENSMAMG00000014294	smarca5	100	97.209	ENSPFOG00000007649	smarca5	100	97.209	Poecilia_formosa
ENSMAMG00000014294	smarca5	100	97.209	ENSPLAG00000003363	smarca5	100	97.209	Poecilia_latipinna
ENSMAMG00000014294	smarca5	100	97.113	ENSPMEG00000019849	smarca5	100	97.113	Poecilia_mexicana
ENSMAMG00000014294	smarca5	100	97.016	ENSPREG00000023250	smarca5	100	97.016	Poecilia_reticulata
ENSMAMG00000014294	smarca5	96	79.780	ENSPPYG00000020703	SMARCA1	93	80.855	Pongo_abelii
ENSMAMG00000014294	smarca5	75	78.125	ENSPCOG00000020722	SMARCA1	93	80.712	Propithecus_coquereli
ENSMAMG00000014294	smarca5	87	83.742	ENSPVAG00000003805	SMARCA1	84	83.837	Pteropus_vampyrus
ENSMAMG00000014294	smarca5	58	97.906	ENSPNYG00000012299	smarca5	92	97.906	Pundamilia_nyererei
ENSMAMG00000014294	smarca5	95	81.818	ENSRNOG00000003762	Smarca1	93	82.383	Rattus_norvegicus
ENSMAMG00000014294	smarca5	96	82.683	ENSRROG00000034167	SMARCA1	93	83.809	Rhinopithecus_roxellana
ENSMAMG00000014294	smarca5	94	83.845	ENSSBOG00000020641	SMARCA1	99	83.845	Saimiri_boliviensis_boliviensis
ENSMAMG00000014294	smarca5	93	79.527	ENSSHAG00000013518	SMARCA1	99	79.527	Sarcophilus_harrisii
ENSMAMG00000014294	smarca5	95	84.328	ENSSFOG00015009043	smarca1	96	84.827	Scleropages_formosus
ENSMAMG00000014294	smarca5	94	93.469	ENSSFOG00015016794	smarca5	100	93.711	Scleropages_formosus
ENSMAMG00000014294	smarca5	100	95.965	ENSSMAG00000004801	smarca5	100	95.965	Scophthalmus_maximus
ENSMAMG00000014294	smarca5	100	97.498	ENSSDUG00000020690	smarca5	100	97.498	Seriola_dumerili
ENSMAMG00000014294	smarca5	100	97.498	ENSSLDG00000025190	smarca5	100	97.498	Seriola_lalandi_dorsalis
ENSMAMG00000014294	smarca5	78	84.342	ENSSARG00000000842	SMARCA1	81	84.342	Sorex_araneus
ENSMAMG00000014294	smarca5	93	84.783	ENSSPUG00000000590	SMARCA1	96	82.748	Sphenodon_punctatus
ENSMAMG00000014294	smarca5	100	97.979	ENSSPAG00000002894	smarca5	100	97.979	Stegastes_partitus
ENSMAMG00000014294	smarca5	93	83.918	ENSSSCG00000012649	SMARCA1	95	83.521	Sus_scrofa
ENSMAMG00000014294	smarca5	94	83.809	ENSTGUG00000003899	-	99	83.809	Taeniopygia_guttata
ENSMAMG00000014294	smarca5	100	95.958	ENSTRUG00000014094	smarca5	100	95.861	Takifugu_rubripes
ENSMAMG00000014294	smarca5	98	94.706	ENSTNIG00000017717	smarca5	97	95.365	Tetraodon_nigroviridis
ENSMAMG00000014294	smarca5	86	82.816	ENSTBEG00000014973	SMARCA1	89	82.864	Tupaia_belangeri
ENSMAMG00000014294	smarca5	93	79.796	ENSTTRG00000006168	SMARCA1	96	80.652	Tursiops_truncatus
ENSMAMG00000014294	smarca5	96	82.482	ENSUAMG00000020201	SMARCA1	93	83.503	Ursus_americanus
ENSMAMG00000014294	smarca5	95	79.032	ENSUMAG00000004073	SMARCA1	96	84.841	Ursus_maritimus
ENSMAMG00000014294	smarca5	73	87.171	ENSVPAG00000010492	-	77	87.543	Vicugna_pacos
ENSMAMG00000014294	smarca5	96	82.700	ENSVVUG00000008878	SMARCA1	98	85.304	Vulpes_vulpes
ENSMAMG00000014294	smarca5	94	84.232	ENSXETG00000001526	smarca1	98	84.560	Xenopus_tropicalis
ENSMAMG00000014294	smarca5	97	97.036	ENSXCOG00000011170	smarca5	100	97.036	Xiphophorus_couchianus
ENSMAMG00000014294	smarca5	100	96.824	ENSXMAG00000009678	smarca5	100	96.824	Xiphophorus_maculatus