EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000014372 (Gene tree)
Gene ID: 113137875
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 39822 bases
Position: chrOOHQ01000081.1:12471908-12511729
Accession: 113137875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000021470	CPSF_A	PF03178.15	3.9e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000022015	-	7048	-	ENSMAMP00000021470	1140 (aa)	XP_026175593	UPI000E45D88E

Gene Model

Click here to download ENSMAMG00000014372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000014372's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000014372	ddb1	100	91.404	ENSG00000167986	DDB1	100	96.575	Homo_sapiens
ENSMAMG00000014372	ddb1	98	99.372	ENSAPOG00000005036	ddb1	99	99.388	Acanthochromis_polyacanthus
ENSMAMG00000014372	ddb1	100	91.491	ENSAMEG00000016518	DDB1	100	91.491	Ailuropoda_melanoleuca
ENSMAMG00000014372	ddb1	86	99.082	ENSACIG00000020624	ddb1	99	99.082	Amphilophus_citrinellus
ENSMAMG00000014372	ddb1	100	99.386	ENSAOCG00000003066	ddb1	100	99.386	Amphiprion_ocellaris
ENSMAMG00000014372	ddb1	100	99.386	ENSAPEG00000000092	ddb1	100	99.386	Amphiprion_percula
ENSMAMG00000014372	ddb1	94	99.442	ENSATEG00000020571	ddb1	97	99.442	Anabas_testudineus
ENSMAMG00000014372	ddb1	99	90.088	ENSAPLG00000007174	DDB1	99	90.088	Anas_platyrhynchos
ENSMAMG00000014372	ddb1	100	90.965	ENSACAG00000017758	DDB1	100	90.965	Anolis_carolinensis
ENSMAMG00000014372	ddb1	100	91.404	ENSANAG00000021878	DDB1	100	91.404	Aotus_nancymaae
ENSMAMG00000014372	ddb1	100	99.035	ENSACLG00000012401	ddb1	100	99.035	Astatotilapia_calliptera
ENSMAMG00000014372	ddb1	100	91.404	ENSBTAG00000021569	DDB1	93	91.404	Bos_taurus
ENSMAMG00000014372	ddb1	100	36.955	WBGene00010890	ddb-1	100	36.955	Caenorhabditis_elegans
ENSMAMG00000014372	ddb1	100	91.404	ENSCJAG00000019319	DDB1	100	91.404	Callithrix_jacchus
ENSMAMG00000014372	ddb1	100	91.491	ENSCAFG00000016264	DDB1	100	91.491	Canis_familiaris
ENSMAMG00000014372	ddb1	94	91.721	ENSCAFG00020012722	DDB1	99	91.721	Canis_lupus_dingo
ENSMAMG00000014372	ddb1	100	91.404	ENSCHIG00000014969	DDB1	100	91.404	Capra_hircus
ENSMAMG00000014372	ddb1	100	91.053	ENSTSYG00000008027	DDB1	100	91.053	Carlito_syrichta
ENSMAMG00000014372	ddb1	98	91.332	ENSCAPG00000010786	DDB1	100	91.332	Cavia_aperea
ENSMAMG00000014372	ddb1	100	91.316	ENSCPOG00000009956	DDB1	100	91.316	Cavia_porcellus
ENSMAMG00000014372	ddb1	100	91.404	ENSCCAG00000035883	DDB1	100	91.404	Cebus_capucinus
ENSMAMG00000014372	ddb1	100	88.976	ENSCATG00000044495	DDB1	100	88.976	Cercocebus_atys
ENSMAMG00000014372	ddb1	100	91.404	ENSCLAG00000004126	DDB1	100	91.404	Chinchilla_lanigera
ENSMAMG00000014372	ddb1	100	91.404	ENSCSAG00000006392	DDB1	100	91.404	Chlorocebus_sabaeus
ENSMAMG00000014372	ddb1	88	84.848	ENSCHOG00000011377	DDB1	90	84.848	Choloepus_hoffmanni
ENSMAMG00000014372	ddb1	100	91.316	ENSCPBG00000017728	DDB1	100	91.316	Chrysemys_picta_bellii
ENSMAMG00000014372	ddb1	100	61.372	ENSCING00000007437	-	100	61.372	Ciona_intestinalis
ENSMAMG00000014372	ddb1	94	60.553	ENSCSAVG00000004783	-	100	60.553	Ciona_savignyi
ENSMAMG00000014372	ddb1	100	91.404	ENSCANG00000019948	DDB1	100	91.404	Colobus_angolensis_palliatus
ENSMAMG00000014372	ddb1	100	91.491	ENSCGRG00001016599	Ddb1	100	91.491	Cricetulus_griseus_chok1gshd
ENSMAMG00000014372	ddb1	100	91.491	ENSCGRG00000013427	Ddb1	100	91.491	Cricetulus_griseus_crigri
ENSMAMG00000014372	ddb1	93	98.680	ENSCSEG00000012499	ddb1	99	96.964	Cynoglossus_semilaevis
ENSMAMG00000014372	ddb1	94	98.043	ENSCVAG00000019531	ddb1	99	98.043	Cyprinodon_variegatus
ENSMAMG00000014372	ddb1	100	92.995	ENSDARG00000074431	ddb1	100	92.995	Danio_rerio
ENSMAMG00000014372	ddb1	94	91.721	ENSDNOG00000014884	DDB1	97	91.721	Dasypus_novemcinctus
ENSMAMG00000014372	ddb1	84	95.455	ENSDORG00000000127	Ddb1	100	95.455	Dipodomys_ordii
ENSMAMG00000014372	ddb1	100	60.524	FBgn0260962	pic	100	60.524	Drosophila_melanogaster
ENSMAMG00000014372	ddb1	78	30.065	FBgn0024698	Cpsf160	68	30.065	Drosophila_melanogaster
ENSMAMG00000014372	ddb1	71	95.276	ENSETEG00000001053	-	71	95.276	Echinops_telfairi
ENSMAMG00000014372	ddb1	78	84.364	ENSEBUG00000014593	ddb1	97	84.364	Eptatretus_burgeri
ENSMAMG00000014372	ddb1	100	91.491	ENSEASG00005008184	DDB1	100	91.491	Equus_asinus_asinus
ENSMAMG00000014372	ddb1	100	91.579	ENSECAG00000012136	DDB1	100	91.579	Equus_caballus
ENSMAMG00000014372	ddb1	85	87.710	ENSEEUG00000003194	DDB1	85	87.710	Erinaceus_europaeus
ENSMAMG00000014372	ddb1	100	97.807	ENSELUG00000023868	ddb1	100	97.807	Esox_lucius
ENSMAMG00000014372	ddb1	100	91.491	ENSFCAG00000029716	DDB1	100	91.491	Felis_catus
ENSMAMG00000014372	ddb1	100	90.726	ENSFALG00000011981	DDB1	100	90.726	Ficedula_albicollis
ENSMAMG00000014372	ddb1	100	91.404	ENSFDAG00000005128	DDB1	100	91.404	Fukomys_damarensis
ENSMAMG00000014372	ddb1	90	96.903	ENSFHEG00000022133	ddb1	99	96.903	Fundulus_heteroclitus
ENSMAMG00000014372	ddb1	79	98.662	ENSGMOG00000019386	ddb1	94	98.662	Gadus_morhua
ENSMAMG00000014372	ddb1	100	91.228	ENSGALG00000042333	DDB1	100	91.228	Gallus_gallus
ENSMAMG00000014372	ddb1	94	98.509	ENSGAFG00000013142	ddb1	99	98.509	Gambusia_affinis
ENSMAMG00000014372	ddb1	96	97.800	ENSGACG00000017182	ddb1	100	97.800	Gasterosteus_aculeatus
ENSMAMG00000014372	ddb1	95	91.144	ENSGAGG00000014124	DDB1	100	91.144	Gopherus_agassizii
ENSMAMG00000014372	ddb1	100	91.404	ENSGGOG00000004052	DDB1	100	91.404	Gorilla_gorilla
ENSMAMG00000014372	ddb1	100	99.035	ENSHBUG00000008873	ddb1	100	99.035	Haplochromis_burtoni
ENSMAMG00000014372	ddb1	100	91.404	ENSHGLG00000018430	DDB1	100	91.404	Heterocephalus_glaber_female
ENSMAMG00000014372	ddb1	100	90.439	ENSHGLG00100014475	DDB1	100	90.439	Heterocephalus_glaber_male
ENSMAMG00000014372	ddb1	94	98.513	ENSHCOG00000018670	ddb1	98	98.513	Hippocampus_comes
ENSMAMG00000014372	ddb1	100	96.404	ENSIPUG00000005612	DDB1	100	96.404	Ictalurus_punctatus
ENSMAMG00000014372	ddb1	100	91.404	ENSSTOG00000007552	DDB1	100	91.404	Ictidomys_tridecemlineatus
ENSMAMG00000014372	ddb1	100	91.316	ENSJJAG00000017769	Ddb1	100	91.316	Jaculus_jaculus
ENSMAMG00000014372	ddb1	94	98.602	ENSKMAG00000002315	ddb1	99	98.602	Kryptolebias_marmoratus
ENSMAMG00000014372	ddb1	84	99.584	ENSLBEG00000017065	ddb1	99	99.584	Labrus_bergylta
ENSMAMG00000014372	ddb1	100	90.806	ENSLACG00000017611	DDB1	100	90.806	Latimeria_chalumnae
ENSMAMG00000014372	ddb1	92	88.649	ENSLOCG00000000012	ddb1	100	88.649	Lepisosteus_oculatus
ENSMAMG00000014372	ddb1	100	91.316	ENSLAFG00000011513	DDB1	100	91.316	Loxodonta_africana
ENSMAMG00000014372	ddb1	100	91.404	ENSMFAG00000042035	DDB1	100	91.404	Macaca_fascicularis
ENSMAMG00000014372	ddb1	99	91.424	ENSMMUG00000002691	DDB1	100	90.789	Macaca_mulatta
ENSMAMG00000014372	ddb1	100	91.404	ENSMNEG00000031559	DDB1	100	91.404	Macaca_nemestrina
ENSMAMG00000014372	ddb1	100	91.404	ENSMLEG00000044136	DDB1	100	91.404	Mandrillus_leucophaeus
ENSMAMG00000014372	ddb1	100	98.947	ENSMZEG00005013835	ddb1	100	98.947	Maylandia_zebra
ENSMAMG00000014372	ddb1	94	90.410	ENSMGAG00000004990	DDB1	100	90.410	Meleagris_gallopavo
ENSMAMG00000014372	ddb1	100	91.491	ENSMAUG00000012926	Ddb1	100	91.491	Mesocricetus_auratus
ENSMAMG00000014372	ddb1	100	91.579	ENSMICG00000013703	DDB1	100	91.579	Microcebus_murinus
ENSMAMG00000014372	ddb1	100	91.404	ENSMOCG00000020499	Ddb1	100	91.404	Microtus_ochrogaster
ENSMAMG00000014372	ddb1	86	99.694	ENSMMOG00000001758	ddb1	99	99.694	Mola_mola
ENSMAMG00000014372	ddb1	100	82.699	ENSMODG00000020353	DDB1	100	82.699	Monodelphis_domestica
ENSMAMG00000014372	ddb1	100	99.561	ENSMALG00000014071	ddb1	100	99.561	Monopterus_albus
ENSMAMG00000014372	ddb1	100	91.491	MGP_CAROLIEiJ_G0022695	Ddb1	100	91.491	Mus_caroli
ENSMAMG00000014372	ddb1	100	91.579	ENSMUSG00000024740	Ddb1	100	91.579	Mus_musculus
ENSMAMG00000014372	ddb1	100	91.491	MGP_PahariEiJ_G0014189	Ddb1	100	91.491	Mus_pahari
ENSMAMG00000014372	ddb1	100	91.579	MGP_SPRETEiJ_G0023609	Ddb1	100	91.579	Mus_spretus
ENSMAMG00000014372	ddb1	100	88.421	ENSMPUG00000014200	DDB1	100	88.421	Mustela_putorius_furo
ENSMAMG00000014372	ddb1	100	91.579	ENSMLUG00000013232	DDB1	100	91.579	Myotis_lucifugus
ENSMAMG00000014372	ddb1	100	91.404	ENSNGAG00000009384	Ddb1	100	91.404	Nannospalax_galili
ENSMAMG00000014372	ddb1	100	99.123	ENSNBRG00000019581	ddb1	100	99.123	Neolamprologus_brichardi
ENSMAMG00000014372	ddb1	100	88.542	ENSNLEG00000002022	DDB1	100	88.542	Nomascus_leucogenys
ENSMAMG00000014372	ddb1	90	94.014	ENSMEUG00000001099	DDB1	93	94.014	Notamacropus_eugenii
ENSMAMG00000014372	ddb1	90	82.929	ENSOPRG00000008254	DDB1	90	82.929	Ochotona_princeps
ENSMAMG00000014372	ddb1	100	91.491	ENSODEG00000002419	DDB1	100	91.491	Octodon_degus
ENSMAMG00000014372	ddb1	100	99.123	ENSONIG00000005804	ddb1	100	99.123	Oreochromis_niloticus
ENSMAMG00000014372	ddb1	91	91.279	ENSOANG00000004897	DDB1	100	91.279	Ornithorhynchus_anatinus
ENSMAMG00000014372	ddb1	100	91.404	ENSOCUG00000001667	DDB1	100	91.404	Oryctolagus_cuniculus
ENSMAMG00000014372	ddb1	96	96.792	ENSORLG00000001399	ddb1	98	98.079	Oryzias_latipes
ENSMAMG00000014372	ddb1	96	96.700	ENSORLG00020001277	ddb1	97	96.700	Oryzias_latipes_hni
ENSMAMG00000014372	ddb1	94	97.953	ENSORLG00015002080	ddb1	99	97.953	Oryzias_latipes_hsok
ENSMAMG00000014372	ddb1	96	96.445	ENSOMEG00000006181	ddb1	99	96.445	Oryzias_melastigma
ENSMAMG00000014372	ddb1	100	91.579	ENSOGAG00000016103	DDB1	100	91.579	Otolemur_garnettii
ENSMAMG00000014372	ddb1	99	91.630	ENSOARG00000011716	DDB1	98	91.630	Ovis_aries
ENSMAMG00000014372	ddb1	100	91.404	ENSPPAG00000035343	DDB1	100	91.404	Pan_paniscus
ENSMAMG00000014372	ddb1	100	91.491	ENSPPRG00000013300	DDB1	100	91.491	Panthera_pardus
ENSMAMG00000014372	ddb1	98	91.510	ENSPTIG00000006909	DDB1	98	91.510	Panthera_tigris_altaica
ENSMAMG00000014372	ddb1	100	91.404	ENSPTRG00000003737	DDB1	100	91.404	Pan_troglodytes
ENSMAMG00000014372	ddb1	100	91.404	ENSPANG00000000242	DDB1	100	91.404	Papio_anubis
ENSMAMG00000014372	ddb1	94	96.645	ENSPKIG00000019213	ddb1	94	96.645	Paramormyrops_kingsleyae
ENSMAMG00000014372	ddb1	98	90.747	ENSPSIG00000013275	DDB1	100	90.747	Pelodiscus_sinensis
ENSMAMG00000014372	ddb1	86	99.184	ENSPMGG00000021179	ddb1	99	99.184	Periophthalmus_magnuspinnatus
ENSMAMG00000014372	ddb1	100	91.491	ENSPEMG00000012241	Ddb1	100	91.491	Peromyscus_maniculatus_bairdii
ENSMAMG00000014372	ddb1	89	86.837	ENSPMAG00000008479	ddb1	100	86.837	Petromyzon_marinus
ENSMAMG00000014372	ddb1	100	91.754	ENSPCIG00000002643	DDB1	100	91.754	Phascolarctos_cinereus
ENSMAMG00000014372	ddb1	100	98.510	ENSPFOG00000002768	ddb1	100	98.510	Poecilia_formosa
ENSMAMG00000014372	ddb1	100	98.333	ENSPLAG00000017227	ddb1	100	98.333	Poecilia_latipinna
ENSMAMG00000014372	ddb1	100	98.333	ENSPMEG00000011398	ddb1	100	98.333	Poecilia_mexicana
ENSMAMG00000014372	ddb1	94	98.605	ENSPREG00000004440	ddb1	98	98.605	Poecilia_reticulata
ENSMAMG00000014372	ddb1	100	87.086	ENSPPYG00000003193	DDB1	100	87.086	Pongo_abelii
ENSMAMG00000014372	ddb1	85	89.403	ENSPCAG00000011040	DDB1	85	89.403	Procavia_capensis
ENSMAMG00000014372	ddb1	100	90.368	ENSPCOG00000015176	DDB1	100	90.368	Propithecus_coquereli
ENSMAMG00000014372	ddb1	100	91.316	ENSPVAG00000003847	DDB1	100	91.316	Pteropus_vampyrus
ENSMAMG00000014372	ddb1	94	97.018	ENSPNAG00000006635	ddb1	97	97.018	Pygocentrus_nattereri
ENSMAMG00000014372	ddb1	100	91.579	ENSRNOG00000020715	Ddb1	100	91.579	Rattus_norvegicus
ENSMAMG00000014372	ddb1	100	91.404	ENSRBIG00000033611	DDB1	100	91.404	Rhinopithecus_bieti
ENSMAMG00000014372	ddb1	100	91.404	ENSRROG00000041407	DDB1	100	91.404	Rhinopithecus_roxellana
ENSMAMG00000014372	ddb1	100	91.491	ENSSBOG00000019775	DDB1	100	91.491	Saimiri_boliviensis_boliviensis
ENSMAMG00000014372	ddb1	94	89.252	ENSSHAG00000011600	DDB1	100	89.252	Sarcophilus_harrisii
ENSMAMG00000014372	ddb1	94	96.654	ENSSFOG00015011151	ddb1	97	96.654	Scleropages_formosus
ENSMAMG00000014372	ddb1	100	99.211	ENSSMAG00000009495	ddb1	100	99.211	Scophthalmus_maximus
ENSMAMG00000014372	ddb1	100	99.649	ENSSDUG00000004642	ddb1	100	99.649	Seriola_dumerili
ENSMAMG00000014372	ddb1	100	99.649	ENSSLDG00000015804	ddb1	100	99.649	Seriola_lalandi_dorsalis
ENSMAMG00000014372	ddb1	70	94.340	ENSSARG00000003290	-	72	94.340	Sorex_araneus
ENSMAMG00000014372	ddb1	100	91.228	ENSSPUG00000019338	DDB1	100	91.228	Sphenodon_punctatus
ENSMAMG00000014372	ddb1	94	99.349	ENSSPAG00000009888	ddb1	99	99.349	Stegastes_partitus
ENSMAMG00000014372	ddb1	100	90.526	ENSSSCG00000013094	DDB1	100	90.526	Sus_scrofa
ENSMAMG00000014372	ddb1	100	90.789	ENSTGUG00000006414	DDB1	100	90.789	Taeniopygia_guttata
ENSMAMG00000014372	ddb1	94	97.763	ENSTRUG00000016682	ddb1	98	97.763	Takifugu_rubripes
ENSMAMG00000014372	ddb1	88	92.814	ENSTNIG00000009565	ddb1	99	92.814	Tetraodon_nigroviridis
ENSMAMG00000014372	ddb1	92	85.770	ENSTTRG00000011055	DDB1	94	85.770	Tursiops_truncatus
ENSMAMG00000014372	ddb1	94	91.721	ENSUAMG00000017793	DDB1	93	91.721	Ursus_americanus
ENSMAMG00000014372	ddb1	94	91.721	ENSUMAG00000011788	DDB1	98	91.721	Ursus_maritimus
ENSMAMG00000014372	ddb1	90	86.891	ENSVPAG00000007963	DDB1	92	86.891	Vicugna_pacos
ENSMAMG00000014372	ddb1	100	91.491	ENSVVUG00000004987	DDB1	100	91.491	Vulpes_vulpes
ENSMAMG00000014372	ddb1	100	88.724	ENSXETG00000008820	ddb1	100	88.724	Xenopus_tropicalis
ENSMAMG00000014372	ddb1	86	98.673	ENSXCOG00000013956	ddb1	99	98.673	Xiphophorus_couchianus
ENSMAMG00000014372	ddb1	94	98.509	ENSXMAG00000000022	ddb1	99	98.509	Xiphophorus_maculatus