EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000014602 (Gene tree)
Gene ID: 113136516
Gene Symbol: rab13
Alias: cb764|hm:zeh0455
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 6053 bases
Position: chrOOHQ01000011.1:2303214-2309266
Accession: 113136516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000021707	GTP_EFTU	PF00009.27	1.9e-06	1	1
ENSMAMP00000021715	MMR_HSR1	PF01926.23	7.2e-05	1	1
ENSMAMP00000021725	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000022265	-	2549	XM_026317397	ENSMAMP00000021715	200 (aa)	XP_026173182	UPI000E45A389
ENSMAMT00000022276	-	2516	-	ENSMAMP00000021725	237 (aa)	-	-
ENSMAMT00000022257	-	1894	-	ENSMAMP00000021707	191 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000014602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000014602's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000014602	rab13	85	45.349	ENSMAMG00000011131	-	81	45.349
ENSMAMG00000014602	rab13	88	37.430	ENSMAMG00000020246	-	86	37.430
ENSMAMG00000014602	rab13	84	39.535	ENSMAMG00000021095	si:dkey-13a21.4	93	37.696
ENSMAMG00000014602	rab13	86	45.087	ENSMAMG00000021329	RAB39B	81	45.087
ENSMAMG00000014602	rab13	96	34.715	ENSMAMG00000005606	kras	98	34.715
ENSMAMG00000014602	rab13	80	44.654	ENSMAMG00000009672	rab6ba	90	40.107
ENSMAMG00000014602	rab13	86	44.186	ENSMAMG00000010297	rab25b	83	43.750
ENSMAMG00000014602	rab13	88	55.429	ENSMAMG00000002795	rab15	91	52.577
ENSMAMG00000014602	rab13	81	32.558	ENSMAMG00000010217	rasl11a	78	30.500
ENSMAMG00000014602	rab13	58	30.769	ENSMAMG00000002666	arl3	61	30.579
ENSMAMG00000014602	rab13	94	38.806	ENSMAMG00000020214	rab34b	79	38.806
ENSMAMG00000014602	rab13	84	43.195	ENSMAMG00000002296	rab42a	78	43.195
ENSMAMG00000014602	rab13	77	30.573	ENSMAMG00000012951	-	82	30.573
ENSMAMG00000014602	rab13	80	45.283	ENSMAMG00000012488	rab6a	91	40.526
ENSMAMG00000014602	rab13	77	36.364	ENSMAMG00000006281	rheb	83	36.364
ENSMAMG00000014602	rab13	88	37.430	ENSMAMG00000023962	RAB7A	86	37.430
ENSMAMG00000014602	rab13	95	41.538	ENSMAMG00000018445	rab18b	93	41.538
ENSMAMG00000014602	rab13	80	45.283	ENSMAMG00000012233	rab6bb	76	45.283
ENSMAMG00000014602	rab13	82	39.766	ENSMAMG00000009927	rab9b	83	39.766
ENSMAMG00000014602	rab13	96	35.897	ENSMAMG00000004106	rras	96	35.897
ENSMAMG00000014602	rab13	100	52.239	ENSMAMG00000020135	zgc:171927	94	52.239
ENSMAMG00000014602	rab13	95	39.583	ENSMAMG00000012573	rab5aa	89	39.583
ENSMAMG00000014602	rab13	98	42.927	ENSMAMG00000010278	rab11al	95	42.927
ENSMAMG00000014602	rab13	93	36.585	ENSMAMG00000001098	rab33ba	85	36.585
ENSMAMG00000014602	rab13	96	40.104	ENSMAMG00000020859	rab41	85	40.104
ENSMAMG00000014602	rab13	89	37.778	ENSMAMG00000010136	rab36	67	37.778
ENSMAMG00000014602	rab13	84	49.405	ENSMAMG00000011549	rab2a	79	49.405
ENSMAMG00000014602	rab13	87	38.043	ENSMAMG00000006963	RAB29	93	36.410
ENSMAMG00000014602	rab13	95	37.113	ENSMAMG00000016207	-	88	37.113
ENSMAMG00000014602	rab13	98	31.658	ENSMAMG00000001320	si:cabz01085950.1	81	31.658
ENSMAMG00000014602	rab13	78	40.123	ENSMAMG00000000238	rab32b	74	40.123
ENSMAMG00000014602	rab13	78	49.359	ENSMAMG00000020286	-	75	49.359
ENSMAMG00000014602	rab13	84	35.294	ENSMAMG00000013700	si:ch73-116o1.2	81	35.294
ENSMAMG00000014602	rab13	77	35.714	ENSMAMG00000001748	rhebl1	83	35.714
ENSMAMG00000014602	rab13	97	37.688	ENSMAMG00000012750	rab14	96	37.688
ENSMAMG00000014602	rab13	54	30.476	ENSMAMG00000021160	arf5	56	30.476
ENSMAMG00000014602	rab13	85	48.521	ENSMAMG00000011973	rab30	85	47.399
ENSMAMG00000014602	rab13	87	45.665	ENSMAMG00000018556	rab11ba	81	45.455
ENSMAMG00000014602	rab13	97	39.423	ENSMAMG00000018450	-	97	39.423
ENSMAMG00000014602	rab13	57	35.652	ENSMAMG00000012997	RAP2B	94	36.220
ENSMAMG00000014602	rab13	92	44.041	ENSMAMG00000006378	rab11bb	89	44.041
ENSMAMG00000014602	rab13	93	44.624	ENSMAMG00000017327	rab11a	87	44.624
ENSMAMG00000014602	rab13	78	39.375	ENSMAMG00000013538	rab9a	79	39.375
ENSMAMG00000014602	rab13	96	34.375	ENSMAMG00000004359	hrasb	98	34.375
ENSMAMG00000014602	rab13	86	50.581	ENSMAMG00000006862	rab12	74	48.128
ENSMAMG00000014602	rab13	80	43.293	ENSMAMG00000017431	zgc:101559	80	39.896
ENSMAMG00000014602	rab13	87	37.572	ENSMAMG00000015456	rab23	89	38.298
ENSMAMG00000014602	rab13	98	54.500	ENSMAMG00000018306	-	98	54.500
ENSMAMG00000014602	rab13	95	52.850	ENSMAMG00000001408	rab1ba	97	52.850
ENSMAMG00000014602	rab13	74	44.444	ENSMAMG00000006640	-	63	44.737
ENSMAMG00000014602	rab13	80	33.951	ENSMAMG00000008168	rabl2	71	33.951
ENSMAMG00000014602	rab13	81	39.130	ENSMAMG00000006024	rab22a	83	39.130
ENSMAMG00000014602	rab13	87	46.243	ENSMAMG00000018533	-	81	45.455
ENSMAMG00000014602	rab13	80	43.750	ENSMAMG00000012471	rab25a	89	40.212
ENSMAMG00000014602	rab13	88	52.273	ENSMAMG00000006886	RAB15	88	49.733
ENSMAMG00000014602	rab13	79	43.038	ENSMAMG00000022322	rab5c	72	43.038
ENSMAMG00000014602	rab13	84	31.250	ENSMAMG00000022707	dnajc27	67	31.148
ENSMAMG00000014602	rab13	81	41.212	ENSMAMG00000018672	rab34a	73	38.947
ENSMAMG00000014602	rab13	91	47.802	ENSMAMG00000019230	si:dkey-16l2.16	87	47.802
ENSMAMG00000014602	rab13	90	44.324	ENSMAMG00000014320	rab18a	88	44.324
ENSMAMG00000014602	rab13	94	41.327	ENSMAMG00000000565	rab33a	84	41.327
ENSMAMG00000014602	rab13	86	31.844	ENSMAMG00000014747	rasl11b	84	31.795

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000014602	rab13	99	75.248	ENSG00000143545	RAB13	99	75.248	Homo_sapiens
ENSMAMG00000014602	rab13	91	92.308	ENSACIG00000008584	rab13	92	88.325	Amphilophus_citrinellus
ENSMAMG00000014602	rab13	99	75.980	ENSANAG00000030247	-	99	75.980	Aotus_nancymaae
ENSMAMG00000014602	rab13	100	91.584	ENSAMXG00000030712	rab13	100	91.584	Astyanax_mexicanus
ENSMAMG00000014602	rab13	99	74.272	ENSBTAG00000017604	RAB13	99	74.272	Bos_taurus
ENSMAMG00000014602	rab13	85	46.784	WBGene00019317	K02E10.1	78	46.784	Caenorhabditis_elegans
ENSMAMG00000014602	rab13	87	84.393	ENSCJAG00000009933	-	99	74.272	Callithrix_jacchus
ENSMAMG00000014602	rab13	99	74.272	ENSCHIG00000022271	-	99	74.272	Capra_hircus
ENSMAMG00000014602	rab13	99	75.248	ENSCPOG00000011491	-	99	75.248	Cavia_porcellus
ENSMAMG00000014602	rab13	99	75.248	ENSCCAG00000028502	-	99	75.248	Cebus_capucinus
ENSMAMG00000014602	rab13	99	75.248	ENSCATG00000041779	-	99	75.248	Cercocebus_atys
ENSMAMG00000014602	rab13	99	74.752	ENSCLAG00000006603	-	99	74.752	Chinchilla_lanigera
ENSMAMG00000014602	rab13	99	75.248	ENSCANG00000036573	-	99	75.248	Colobus_angolensis_palliatus
ENSMAMG00000014602	rab13	99	75.490	ENSCGRG00001021505	Rab13	99	75.490	Cricetulus_griseus_chok1gshd
ENSMAMG00000014602	rab13	99	75.490	ENSCGRG00000012126	Rab13	99	75.490	Cricetulus_griseus_crigri
ENSMAMG00000014602	rab13	100	92.500	ENSCSEG00000002358	rab13	100	92.500	Cynoglossus_semilaevis
ENSMAMG00000014602	rab13	100	92.000	ENSDARG00000034771	rab13	100	92.000	Danio_rerio
ENSMAMG00000014602	rab13	99	76.214	ENSDORG00000001591	Rab13	99	76.214	Dipodomys_ordii
ENSMAMG00000014602	rab13	99	74.752	ENSEASG00005000683	-	99	74.752	Equus_asinus_asinus
ENSMAMG00000014602	rab13	99	74.752	ENSECAG00000016551	RAB13	99	74.752	Equus_caballus
ENSMAMG00000014602	rab13	100	72.906	ENSEEUG00000001233	-	100	72.906	Erinaceus_europaeus
ENSMAMG00000014602	rab13	100	90.000	ENSELUG00000012801	rab13	100	90.000	Esox_lucius
ENSMAMG00000014602	rab13	99	74.752	ENSFCAG00000045269	-	99	74.752	Felis_catus
ENSMAMG00000014602	rab13	66	87.121	ENSFDAG00000014469	-	100	87.121	Fukomys_damarensis
ENSMAMG00000014602	rab13	100	91.500	ENSFHEG00000021221	rab13	100	93.443	Fundulus_heteroclitus
ENSMAMG00000014602	rab13	100	95.000	ENSGACG00000011925	rab13	99	95.000	Gasterosteus_aculeatus
ENSMAMG00000014602	rab13	91	83.060	ENSGAGG00000000742	-	100	78.713	Gopherus_agassizii
ENSMAMG00000014602	rab13	99	75.248	ENSGGOG00000023693	RAB13	99	75.248	Gorilla_gorilla
ENSMAMG00000014602	rab13	99	74.627	ENSHGLG00000008749	RAB13	99	74.627	Heterocephalus_glaber_female
ENSMAMG00000014602	rab13	99	74.627	ENSHGLG00100013608	RAB13	99	74.627	Heterocephalus_glaber_male
ENSMAMG00000014602	rab13	100	88.500	ENSHCOG00000007440	rab13	99	95.028	Hippocampus_comes
ENSMAMG00000014602	rab13	100	89.552	ENSIPUG00000003199	rab13	100	89.552	Ictalurus_punctatus
ENSMAMG00000014602	rab13	99	75.728	ENSSTOG00000011222	-	99	75.728	Ictidomys_tridecemlineatus
ENSMAMG00000014602	rab13	99	75.248	ENSJJAG00000010575	Rab13	99	75.248	Jaculus_jaculus
ENSMAMG00000014602	rab13	100	91.500	ENSKMAG00000001908	rab13	100	91.500	Kryptolebias_marmoratus
ENSMAMG00000014602	rab13	100	94.500	ENSLBEG00000026779	rab13	100	94.500	Labrus_bergylta
ENSMAMG00000014602	rab13	89	78.531	ENSLACG00000008103	-	100	78.652	Latimeria_chalumnae
ENSMAMG00000014602	rab13	99	75.248	ENSMFAG00000041018	RAB13	99	75.248	Macaca_fascicularis
ENSMAMG00000014602	rab13	99	75.248	ENSMNEG00000028951	-	99	75.248	Macaca_nemestrina
ENSMAMG00000014602	rab13	99	75.248	ENSMLEG00000042247	-	99	75.248	Mandrillus_leucophaeus
ENSMAMG00000014602	rab13	99	75.743	ENSMAUG00000015713	Rab13	99	75.743	Mesocricetus_auratus
ENSMAMG00000014602	rab13	99	76.119	ENSMICG00000010340	-	99	76.119	Microcebus_murinus
ENSMAMG00000014602	rab13	99	76.238	ENSMOCG00000021448	Rab13	99	76.238	Microtus_ochrogaster
ENSMAMG00000014602	rab13	99	77.340	ENSMODG00000017295	-	84	77.340	Monodelphis_domestica
ENSMAMG00000014602	rab13	99	73.529	MGP_CAROLIEiJ_G0025227	Rab13	99	73.529	Mus_caroli
ENSMAMG00000014602	rab13	99	73.786	ENSMUSG00000027935	Rab13	99	73.786	Mus_musculus
ENSMAMG00000014602	rab13	100	73.171	MGP_PahariEiJ_G0026671	Rab13	100	73.171	Mus_pahari
ENSMAMG00000014602	rab13	99	75.490	ENSNGAG00000010309	Rab13	99	75.490	Nannospalax_galili
ENSMAMG00000014602	rab13	100	94.000	ENSNBRG00000004124	rab13	100	94.000	Neolamprologus_brichardi
ENSMAMG00000014602	rab13	99	75.248	ENSNLEG00000028944	-	94	80.541	Nomascus_leucogenys
ENSMAMG00000014602	rab13	99	77.228	ENSMEUG00000009667	-	99	77.228	Notamacropus_eugenii
ENSMAMG00000014602	rab13	64	87.402	ENSODEG00000012634	-	100	87.402	Octodon_degus
ENSMAMG00000014602	rab13	99	74.752	ENSODEG00000010443	-	99	74.752	Octodon_degus
ENSMAMG00000014602	rab13	100	90.099	ENSONIG00000006340	rab13	100	90.099	Oreochromis_niloticus
ENSMAMG00000014602	rab13	87	84.393	ENSOCUG00000006286	-	97	84.393	Oryctolagus_cuniculus
ENSMAMG00000014602	rab13	100	95.500	ENSOMEG00000008210	rab13	100	95.500	Oryzias_melastigma
ENSMAMG00000014602	rab13	99	74.500	ENSOGAG00000016969	-	99	74.500	Otolemur_garnettii
ENSMAMG00000014602	rab13	99	75.248	ENSPPAG00000028435	-	99	75.248	Pan_paniscus
ENSMAMG00000014602	rab13	99	74.752	ENSPPRG00000008865	-	99	74.752	Panthera_pardus
ENSMAMG00000014602	rab13	99	75.248	ENSPTRG00000001370	RAB13	99	75.248	Pan_troglodytes
ENSMAMG00000014602	rab13	99	75.248	ENSPANG00000004479	-	99	75.248	Papio_anubis
ENSMAMG00000014602	rab13	100	93.000	ENSPMGG00000007680	rab13	100	93.000	Periophthalmus_magnuspinnatus
ENSMAMG00000014602	rab13	58	86.957	ENSPEMG00000017353	-	86	86.957	Peromyscus_maniculatus_bairdii
ENSMAMG00000014602	rab13	99	77.228	ENSPCIG00000029350	-	99	77.228	Phascolarctos_cinereus
ENSMAMG00000014602	rab13	89	97.740	ENSPLAG00000005832	RAB13	95	97.753	Poecilia_latipinna
ENSMAMG00000014602	rab13	100	95.000	ENSPREG00000017567	rab13	100	95.000	Poecilia_reticulata
ENSMAMG00000014602	rab13	99	75.248	ENSPPYG00000000790	-	99	75.248	Pongo_abelii
ENSMAMG00000014602	rab13	99	76.617	ENSPCOG00000012189	-	99	76.617	Propithecus_coquereli
ENSMAMG00000014602	rab13	99	75.622	ENSPVAG00000011095	-	99	75.622	Pteropus_vampyrus
ENSMAMG00000014602	rab13	89	95.480	ENSPNAG00000004189	rab13	95	95.531	Pygocentrus_nattereri
ENSMAMG00000014602	rab13	99	74.510	ENSRNOG00000016733	Rab13	99	74.510	Rattus_norvegicus
ENSMAMG00000014602	rab13	99	75.248	ENSRBIG00000008552	-	99	75.248	Rhinopithecus_bieti
ENSMAMG00000014602	rab13	99	75.248	ENSRROG00000036885	-	99	75.248	Rhinopithecus_roxellana
ENSMAMG00000014602	rab13	99	76.119	ENSSBOG00000020342	-	99	76.119	Saimiri_boliviensis_boliviensis
ENSMAMG00000014602	rab13	99	78.218	ENSSHAG00000011866	-	99	78.218	Sarcophilus_harrisii
ENSMAMG00000014602	rab13	99	74.272	ENSSSCG00000006564	-	99	74.272	Sus_scrofa
ENSMAMG00000014602	rab13	100	95.500	ENSTRUG00000024177	rab13	100	95.500	Takifugu_rubripes
ENSMAMG00000014602	rab13	99	76.733	ENSTBEG00000012734	-	99	76.733	Tupaia_belangeri
ENSMAMG00000014602	rab13	99	74.272	ENSTTRG00000011183	-	99	74.272	Tursiops_truncatus
ENSMAMG00000014602	rab13	72	78.102	ENSXETG00000020729	rab13	100	71.875	Xenopus_tropicalis
ENSMAMG00000014602	rab13	89	96.610	ENSXCOG00000019533	rab13	95	96.629	Xiphophorus_couchianus