EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAMG00000014610 (Gene tree)
Gene ID
113126193
Gene Symbol
pabpc1b
Alias
-
Full Name
polyadenylate-binding protein 1
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Plus strand
Length
8984 bases
Position
chrOOHQ01000103.1:13036860-13045843
Accession
113126193
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000021791PABPPF00658.185e-3211
ENSMAMP00000021770PABPPF00658.185.1e-3211
ENSMAMP00000021791RRM_5PF13893.68.2e-1012
ENSMAMP00000021791RRM_5PF13893.68.2e-1022
ENSMAMP00000021770RRM_5PF13893.68.8e-1012
ENSMAMP00000021770RRM_5PF13893.68.8e-1022
ENSMAMP00000021791RRM_1PF00076.227.6e-9014
ENSMAMP00000021791RRM_1PF00076.227.6e-9024
ENSMAMP00000021791RRM_1PF00076.227.6e-9034
ENSMAMP00000021791RRM_1PF00076.227.6e-9044
ENSMAMP00000021770RRM_1PF00076.228.5e-9014
ENSMAMP00000021770RRM_1PF00076.228.5e-9024
ENSMAMP00000021770RRM_1PF00076.228.5e-9034
ENSMAMP00000021770RRM_1PF00076.228.5e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000022342-1863-ENSMAMP00000021791620 (aa)--
ENSMAMT00000022321-4752-ENSMAMP00000021770634 (aa)XP_026155877UPI000E45A990
Gene Model
Click here to download ENSMAMG00000014610's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000014610's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAMG00000014610pabpc1b9976.667ENSMAMG00000010025pabpc49976.572
ENSMAMG00000014610pabpc1b5831.447ENSMAMG00000001247trnau1apa7131.056
ENSMAMG00000014610pabpc1b6036.145ENSMAMG00000004000elavl48736.145
ENSMAMG00000014610pabpc1b9569.771ENSMAMG00000011854pabpc1l9769.935
ENSMAMG00000014610pabpc1b5236.047ENSMAMG00000023208-5136.047
ENSMAMG00000014610pabpc1b5633.645ENSMAMG00000019810rbfox3b5333.645
ENSMAMG00000014610pabpc1b6037.349ENSMAMG00000004806ELAVL29237.349
ENSMAMG00000014610pabpc1b5837.333ENSMAMG00000014397rbm196737.333
ENSMAMG00000014610pabpc1b6730.328ENSMAMG00000003680tia1l8630.328
ENSMAMG00000014610pabpc1b6030.719ENSMAMG00000011697elavl39030.921
ENSMAMG00000014610pabpc1b5334.091ENSMAMG00000017876-5735.714
ENSMAMG00000014610pabpc1b10089.498ENSMAMG00000004502-10093.285
ENSMAMG00000014610pabpc1b5931.111ENSMAMG00000020566-7031.111
ENSMAMG00000014610pabpc1b5634.091ENSMAMG00000010052celf16534.091
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000014610pabpc1b5979.082ENSG00000186288PABPC1L2A9879.082Homo_sapiens
ENSMAMG00000014610pabpc1b5979.082ENSG00000184388PABPC1L2B9879.082Homo_sapiens
ENSMAMG00000014610pabpc1b10097.161ENSAPOG00000017776pabpc1b10097.161Acanthochromis_polyacanthus
ENSMAMG00000014610pabpc1b10089.969ENSAPOG00000015105pabpc1a10089.812Acanthochromis_polyacanthus
ENSMAMG00000014610pabpc1b6079.082ENSAMEG00000019441-9879.082Ailuropoda_melanoleuca
ENSMAMG00000014610pabpc1b10089.812ENSACIG00000004685pabpc1a10089.812Amphilophus_citrinellus
ENSMAMG00000014610pabpc1b10091.339ENSACIG00000018366pabpc1b10091.339Amphilophus_citrinellus
ENSMAMG00000014610pabpc1b10096.530ENSAOCG00000019839pabpc1b10096.530Amphiprion_ocellaris
ENSMAMG00000014610pabpc1b10089.969ENSAOCG00000011656pabpc1a10089.812Amphiprion_ocellaris
ENSMAMG00000014610pabpc1b10089.969ENSAPEG00000006963pabpc1a10089.812Amphiprion_percula
ENSMAMG00000014610pabpc1b10096.530ENSAPEG00000010435pabpc1b10096.530Amphiprion_percula
ENSMAMG00000014610pabpc1b10089.655ENSATEG00000024852pabpc1a10089.498Anabas_testudineus
ENSMAMG00000014610pabpc1b10096.226ENSATEG00000012917pabpc1b10096.226Anabas_testudineus
ENSMAMG00000014610pabpc1b5979.082ENSANAG00000019429-9879.082Aotus_nancymaae
ENSMAMG00000014610pabpc1b5979.082ENSANAG00000019431-9879.082Aotus_nancymaae
ENSMAMG00000014610pabpc1b9991.136ENSACLG00000009399pabpc1a10094.484Astatotilapia_calliptera
ENSMAMG00000014610pabpc1b10095.899ENSACLG00000014335pabpc1b10095.899Astatotilapia_calliptera
ENSMAMG00000014610pabpc1b10095.118ENSAMXG00000008599pabpc1b10095.118Astyanax_mexicanus
ENSMAMG00000014610pabpc1b6078.049ENSBTAG00000050902-9878.049Bos_taurus
ENSMAMG00000014610pabpc1b6176.077ENSBTAG00000052491-9876.077Bos_taurus
ENSMAMG00000014610pabpc1b5979.082ENSCJAG00000041326-9879.082Callithrix_jacchus
ENSMAMG00000014610pabpc1b6178.049ENSCAFG00020002052-9878.049Canis_lupus_dingo
ENSMAMG00000014610pabpc1b5979.082ENSCHIG00000006283-9879.082Capra_hircus
ENSMAMG00000014610pabpc1b5979.082ENSCHIG00000011138-9879.082Capra_hircus
ENSMAMG00000014610pabpc1b5979.082ENSTSYG00000001775-9879.082Carlito_syrichta
ENSMAMG00000014610pabpc1b6079.082ENSCPOG00000009525-9879.082Cavia_porcellus
ENSMAMG00000014610pabpc1b5979.082ENSCCAG00000031524-9879.082Cebus_capucinus
ENSMAMG00000014610pabpc1b5979.082ENSCATG00000043125-9879.082Cercocebus_atys
ENSMAMG00000014610pabpc1b5979.082ENSCATG00000042826-9879.082Cercocebus_atys
ENSMAMG00000014610pabpc1b5978.061ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSMAMG00000014610pabpc1b5978.061ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSMAMG00000014610pabpc1b6079.082ENSCSAG00000000102-9879.082Chlorocebus_sabaeus
ENSMAMG00000014610pabpc1b5979.558ENSCGRG00001023387-9677.835Cricetulus_griseus_chok1gshd
ENSMAMG00000014610pabpc1b10091.167ENSCSEG00000015241-10091.167Cynoglossus_semilaevis
ENSMAMG00000014610pabpc1b9990.000ENSCSEG00000013324pabpc1a9989.841Cynoglossus_semilaevis
ENSMAMG00000014610pabpc1b10089.498ENSCVAG00000021872pabpc1a10089.185Cyprinodon_variegatus
ENSMAMG00000014610pabpc1b10093.701ENSCVAG00000005489pabpc1b10093.701Cyprinodon_variegatus
ENSMAMG00000014610pabpc1b10094.646ENSDARG00000021140pabpc1b10094.961Danio_rerio
ENSMAMG00000014610pabpc1b10090.881ENSDARG00000017219pabpc1a10090.723Danio_rerio
ENSMAMG00000014610pabpc1b6079.894ENSDNOG00000030926-9877.551Dasypus_novemcinctus
ENSMAMG00000014610pabpc1b5977.551ENSDORG00000011362-9877.551Dipodomys_ordii
ENSMAMG00000014610pabpc1b6177.670ENSEASG00005010399-9877.670Equus_asinus_asinus
ENSMAMG00000014610pabpc1b6177.670ENSECAG00000002620-9877.670Equus_caballus
ENSMAMG00000014610pabpc1b6074.490ENSEEUG00000008203-9874.490Erinaceus_europaeus
ENSMAMG00000014610pabpc1b10091.523ENSELUG00000015062-10091.523Esox_lucius
ENSMAMG00000014610pabpc1b6159.052ENSELUG00000005389-9759.052Esox_lucius
ENSMAMG00000014610pabpc1b9990.881ENSELUG00000003614pabpc1a10090.723Esox_lucius
ENSMAMG00000014610pabpc1b5979.082ENSFCAG00000039701-9879.082Felis_catus
ENSMAMG00000014610pabpc1b6079.082ENSFDAG00000005484-9879.082Fukomys_damarensis
ENSMAMG00000014610pabpc1b10089.498ENSFHEG00000018979pabpc1a10089.342Fundulus_heteroclitus
ENSMAMG00000014610pabpc1b10094.164ENSFHEG00000008186pabpc1b10094.164Fundulus_heteroclitus
ENSMAMG00000014610pabpc1b10084.579ENSGMOG00000002448-10084.579Gadus_morhua
ENSMAMG00000014610pabpc1b9988.545ENSGMOG00000013448pabpc1a9988.545Gadus_morhua
ENSMAMG00000014610pabpc1b10095.268ENSGAFG00000010193pabpc1b10095.268Gambusia_affinis
ENSMAMG00000014610pabpc1b10089.342ENSGAFG00000019750pabpc1a10089.185Gambusia_affinis
ENSMAMG00000014610pabpc1b10092.212ENSGACG00000003771pabpc1b10092.523Gasterosteus_aculeatus
ENSMAMG00000014610pabpc1b10089.498ENSGACG00000003572pabpc1a10089.498Gasterosteus_aculeatus
ENSMAMG00000014610pabpc1b5979.082ENSGGOG00000043933-9879.082Gorilla_gorilla
ENSMAMG00000014610pabpc1b5979.082ENSGGOG00000038606-9879.082Gorilla_gorilla
ENSMAMG00000014610pabpc1b9991.136ENSHBUG00000020487pabpc1a10094.484Haplochromis_burtoni
ENSMAMG00000014610pabpc1b10095.899ENSHBUG00000002075pabpc1b10095.899Haplochromis_burtoni
ENSMAMG00000014610pabpc1b5979.082ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSMAMG00000014610pabpc1b5979.082ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSMAMG00000014610pabpc1b5979.082ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSMAMG00000014610pabpc1b10089.498ENSHCOG00000013502pabpc1a10089.342Hippocampus_comes
ENSMAMG00000014610pabpc1b9871.429ENSHCOG00000003175pabpc1b9980.851Hippocampus_comes
ENSMAMG00000014610pabpc1b7956.716ENSIPUG00000018724-7656.716Ictalurus_punctatus
ENSMAMG00000014610pabpc1b10088.819ENSIPUG00000008848pabpc1a10088.976Ictalurus_punctatus
ENSMAMG00000014610pabpc1b10088.179ENSIPUG00000010791-10088.179Ictalurus_punctatus
ENSMAMG00000014610pabpc1b7455.324ENSIPUG00000021244-6555.324Ictalurus_punctatus
ENSMAMG00000014610pabpc1b6079.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSMAMG00000014610pabpc1b6079.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSMAMG00000014610pabpc1b5978.571ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSMAMG00000014610pabpc1b10093.691ENSKMAG00000008049pabpc1b10093.849Kryptolebias_marmoratus
ENSMAMG00000014610pabpc1b10089.812ENSKMAG00000000605pabpc1a10089.498Kryptolebias_marmoratus
ENSMAMG00000014610pabpc1b10095.584ENSLBEG00000026845pabpc1b10095.584Labrus_bergylta
ENSMAMG00000014610pabpc1b10089.342ENSLBEG00000024002-10089.342Labrus_bergylta
ENSMAMG00000014610pabpc1b6078.462ENSLAFG00000023096-9878.462Loxodonta_africana
ENSMAMG00000014610pabpc1b5978.680ENSMFAG00000028878-9878.680Macaca_fascicularis
ENSMAMG00000014610pabpc1b5979.082ENSMMUG00000037681-9879.082Macaca_mulatta
ENSMAMG00000014610pabpc1b5979.082ENSMMUG00000009740-9879.082Macaca_mulatta
ENSMAMG00000014610pabpc1b5979.082ENSMMUG00000039929-9879.082Macaca_mulatta
ENSMAMG00000014610pabpc1b5979.082ENSMNEG00000037732-9879.082Macaca_nemestrina
ENSMAMG00000014610pabpc1b5979.082ENSMLEG00000027495-9879.082Mandrillus_leucophaeus
ENSMAMG00000014610pabpc1b9991.136ENSMZEG00005025416pabpc1a10094.484Maylandia_zebra
ENSMAMG00000014610pabpc1b10095.899ENSMZEG00005026745pabpc1b10095.899Maylandia_zebra
ENSMAMG00000014610pabpc1b5979.082ENSMICG00000047642-9879.082Microcebus_murinus
ENSMAMG00000014610pabpc1b9989.773ENSMMOG00000018044pabpc1a10096.078Mola_mola
ENSMAMG00000014610pabpc1b10089.760ENSMMOG00000018009pabpc1b10089.920Mola_mola
ENSMAMG00000014610pabpc1b9966.930ENSMODG00000015024-9966.930Monodelphis_domestica
ENSMAMG00000014610pabpc1b9873.567ENSMODG00000013156-9873.726Monodelphis_domestica
ENSMAMG00000014610pabpc1b10089.185ENSMALG00000013020-10089.342Monopterus_albus
ENSMAMG00000014610pabpc1b10088.907ENSMALG00000006066pabpc1b10090.063Monopterus_albus
ENSMAMG00000014610pabpc1b5981.421ENSNGAG00000012688-9878.571Nannospalax_galili
ENSMAMG00000014610pabpc1b9991.136ENSNBRG00000003068-10094.484Neolamprologus_brichardi
ENSMAMG00000014610pabpc1b10095.899ENSNBRG00000013737pabpc1b10095.899Neolamprologus_brichardi
ENSMAMG00000014610pabpc1b5979.082ENSNLEG00000018128-9879.082Nomascus_leucogenys
ENSMAMG00000014610pabpc1b5978.571ENSODEG00000018540-9878.571Octodon_degus
ENSMAMG00000014610pabpc1b10095.584ENSONIG00000002717pabpc1b10095.584Oreochromis_niloticus
ENSMAMG00000014610pabpc1b10089.812ENSONIG00000006871-10089.812Oreochromis_niloticus
ENSMAMG00000014610pabpc1b6079.082ENSOCUG00000002565-9879.082Oryctolagus_cuniculus
ENSMAMG00000014610pabpc1b10087.697ENSORLG00000003008-10087.539Oryzias_latipes
ENSMAMG00000014610pabpc1b9993.587ENSORLG00000002691pabpc1a9694.595Oryzias_latipes
ENSMAMG00000014610pabpc1b10088.871ENSORLG00020022398pabpc1a10088.871Oryzias_latipes_hni
ENSMAMG00000014610pabpc1b10087.539ENSORLG00020022259-10087.382Oryzias_latipes_hni
ENSMAMG00000014610pabpc1b10088.013ENSORLG00015010932-10087.855Oryzias_latipes_hsok
ENSMAMG00000014610pabpc1b10088.715ENSORLG00015013633pabpc110088.715Oryzias_latipes_hsok
ENSMAMG00000014610pabpc1b9188.221ENSOMEG00000013627pabpc1b10087.981Oryzias_melastigma
ENSMAMG00000014610pabpc1b10088.871ENSOMEG00000020219pabpc1a10088.871Oryzias_melastigma
ENSMAMG00000014610pabpc1b6079.082ENSOGAG00000026047-9879.082Otolemur_garnettii
ENSMAMG00000014610pabpc1b6079.082ENSOGAG00000029513-9879.082Otolemur_garnettii
ENSMAMG00000014610pabpc1b6079.082ENSOARG00000005943-9879.082Ovis_aries
ENSMAMG00000014610pabpc1b5979.082ENSPPAG00000012920-9879.082Pan_paniscus
ENSMAMG00000014610pabpc1b6079.082ENSPPRG00000011804-9879.082Panthera_pardus
ENSMAMG00000014610pabpc1b6079.082ENSPPRG00000011809-9879.082Panthera_pardus
ENSMAMG00000014610pabpc1b5979.082ENSPTRG00000028252-9879.082Pan_troglodytes
ENSMAMG00000014610pabpc1b5979.082ENSPANG00000011549-9879.082Papio_anubis
ENSMAMG00000014610pabpc1b10095.276ENSPKIG00000005676pabpc1b10095.118Paramormyrops_kingsleyae
ENSMAMG00000014610pabpc1b7490.889ENSPMGG00000022487pabpc1a9490.889Periophthalmus_magnuspinnatus
ENSMAMG00000014610pabpc1b7393.013ENSPMGG00000023134-9992.424Periophthalmus_magnuspinnatus
ENSMAMG00000014610pabpc1b9971.338ENSPCIG00000016995-5571.338Phascolarctos_cinereus
ENSMAMG00000014610pabpc1b10095.268ENSPFOG00000005917pabpc1b10095.268Poecilia_formosa
ENSMAMG00000014610pabpc1b10088.308ENSPFOG00000010815pabpc1a10088.154Poecilia_formosa
ENSMAMG00000014610pabpc1b10095.584ENSPLAG00000001388pabpc1b10095.584Poecilia_latipinna
ENSMAMG00000014610pabpc1b10089.812ENSPLAG00000004114pabpc1a10089.655Poecilia_latipinna
ENSMAMG00000014610pabpc1b10095.268ENSPMEG00000014399pabpc1b10095.268Poecilia_mexicana
ENSMAMG00000014610pabpc1b10089.812ENSPMEG00000001334pabpc1a10089.655Poecilia_mexicana
ENSMAMG00000014610pabpc1b9990.682ENSPREG00000019595pabpc1a10094.005Poecilia_reticulata
ENSMAMG00000014610pabpc1b10095.584ENSPREG00000010911pabpc1b10095.584Poecilia_reticulata
ENSMAMG00000014610pabpc1b6079.082ENSPPYG00000020468-9879.082Pongo_abelii
ENSMAMG00000014610pabpc1b6079.082ENSPCAG00000005308-9879.082Procavia_capensis
ENSMAMG00000014610pabpc1b5979.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSMAMG00000014610pabpc1b6079.487ENSPVAG00000016117-9879.487Pteropus_vampyrus
ENSMAMG00000014610pabpc1b10089.655ENSPNYG00000005192pabpc1a10089.655Pundamilia_nyererei
ENSMAMG00000014610pabpc1b10095.899ENSPNYG00000012578pabpc1b10095.899Pundamilia_nyererei
ENSMAMG00000014610pabpc1b10094.803ENSPNAG00000024626pabpc1b10094.803Pygocentrus_nattereri
ENSMAMG00000014610pabpc1b10090.094ENSPNAG00000028408pabpc1a10089.780Pygocentrus_nattereri
ENSMAMG00000014610pabpc1b5979.082ENSRBIG00000027173-9879.082Rhinopithecus_bieti
ENSMAMG00000014610pabpc1b8891.429ENSRBIG00000028738-9491.429Rhinopithecus_bieti
ENSMAMG00000014610pabpc1b5979.082ENSRROG00000017404-9879.082Rhinopithecus_roxellana
ENSMAMG00000014610pabpc1b9864.205ENSSHAG00000000511-10063.987Sarcophilus_harrisii
ENSMAMG00000014610pabpc1b10095.110ENSSFOG00015002752-10095.110Scleropages_formosus
ENSMAMG00000014610pabpc1b10090.709ENSSFOG00015006662pabpc1a10090.709Scleropages_formosus
ENSMAMG00000014610pabpc1b7180.347ENSSFOG00015019668-9180.347Scleropages_formosus
ENSMAMG00000014610pabpc1b10089.185ENSSMAG00000010803pabpc1a10089.185Scophthalmus_maximus
ENSMAMG00000014610pabpc1b10095.584ENSSMAG00000006869pabpc1b10095.584Scophthalmus_maximus
ENSMAMG00000014610pabpc1b10089.969ENSSDUG00000006675pabpc1a10089.969Seriola_dumerili
ENSMAMG00000014610pabpc1b10094.795ENSSDUG00000011965pabpc1b10094.795Seriola_dumerili
ENSMAMG00000014610pabpc1b10089.969ENSSLDG00000011661pabpc1a10089.969Seriola_lalandi_dorsalis
ENSMAMG00000014610pabpc1b10096.557ENSSLDG00000014156pabpc1b10096.557Seriola_lalandi_dorsalis
ENSMAMG00000014610pabpc1b10089.812ENSSPAG00000014453-10089.655Stegastes_partitus
ENSMAMG00000014610pabpc1b10097.161ENSSPAG00000019265pabpc1b10097.161Stegastes_partitus
ENSMAMG00000014610pabpc1b5979.082ENSSSCG00000032167-9879.082Sus_scrofa
ENSMAMG00000014610pabpc1b5979.082ENSSSCG00000036336-9879.082Sus_scrofa
ENSMAMG00000014610pabpc1b10089.655ENSTRUG00000011577-10089.655Takifugu_rubripes
ENSMAMG00000014610pabpc1b10091.654ENSTRUG00000003767-10091.811Takifugu_rubripes
ENSMAMG00000014610pabpc1b10086.708ENSTNIG00000013307pabpc1a10086.708Tetraodon_nigroviridis
ENSMAMG00000014610pabpc1b10091.850ENSTNIG00000009153pabpc1b10091.850Tetraodon_nigroviridis
ENSMAMG00000014610pabpc1b6079.082ENSTTRG00000013181-9879.082Tursiops_truncatus
ENSMAMG00000014610pabpc1b5979.082ENSUAMG00000008089-9879.082Ursus_americanus
ENSMAMG00000014610pabpc1b9753.583ENSUMAG00000023926-8968.232Ursus_maritimus
ENSMAMG00000014610pabpc1b5979.082ENSUMAG00000003364-9879.082Ursus_maritimus
ENSMAMG00000014610pabpc1b6078.000ENSVVUG00000015892-9778.000Vulpes_vulpes
ENSMAMG00000014610pabpc1b9945.946ENSXETG00000015439-10045.089Xenopus_tropicalis
ENSMAMG00000014610pabpc1b10090.221ENSXCOG00000019901pabpc1b10089.905Xiphophorus_couchianus
ENSMAMG00000014610pabpc1b10087.200ENSXCOG00000017066pabpc1a10087.040Xiphophorus_couchianus
ENSMAMG00000014610pabpc1b10095.110ENSXMAG00000003753pabpc1b10095.110Xiphophorus_maculatus
ENSMAMG00000014610pabpc1b10089.655ENSXMAG00000002555pabpc1a10089.498Xiphophorus_maculatus

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