EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000015092 (Gene tree)
Gene ID: 113133069
Gene Symbol: usb1
Alias: zgc:91896
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 4169 bases
Position: chrOOHQ01000074.1:15774903-15779071
Accession: 113133069
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000022413	HVSL	PF09749.9	6.4e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000022988	-	1298	-	ENSMAMP00000022413	278 (aa)	XP_026167389	UPI000E4641F6

Gene Model

Click here to download ENSMAMG00000015092's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000015092's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000015092	usb1	83	51.502	ENSG00000103005	USB1	100	53.738	Homo_sapiens
ENSMAMG00000015092	usb1	99	73.571	ENSAPOG00000011942	usb1	99	73.571	Acanthochromis_polyacanthus
ENSMAMG00000015092	usb1	99	48.375	ENSAMEG00000017205	USB1	98	49.640	Ailuropoda_melanoleuca
ENSMAMG00000015092	usb1	80	81.166	ENSACIG00000012234	usb1	99	69.474	Amphilophus_citrinellus
ENSMAMG00000015092	usb1	100	73.868	ENSAOCG00000014831	usb1	100	76.678	Amphiprion_ocellaris
ENSMAMG00000015092	usb1	100	73.519	ENSAPEG00000000296	usb1	100	76.325	Amphiprion_percula
ENSMAMG00000015092	usb1	100	77.305	ENSATEG00000009348	usb1	100	77.660	Anabas_testudineus
ENSMAMG00000015092	usb1	80	56.000	ENSAPLG00000002756	USB1	99	56.000	Anas_platyrhynchos
ENSMAMG00000015092	usb1	80	50.667	ENSACAG00000015481	USB1	98	50.667	Anolis_carolinensis
ENSMAMG00000015092	usb1	81	52.212	ENSANAG00000035640	USB1	98	47.653	Aotus_nancymaae
ENSMAMG00000015092	usb1	99	70.714	ENSACLG00000020586	usb1	99	72.143	Astatotilapia_calliptera
ENSMAMG00000015092	usb1	99	58.993	ENSAMXG00000040146	usb1	95	57.627	Astyanax_mexicanus
ENSMAMG00000015092	usb1	99	49.281	ENSBTAG00000015758	USB1	98	49.281	Bos_taurus
ENSMAMG00000015092	usb1	81	53.540	ENSCJAG00000011733	USB1	98	48.736	Callithrix_jacchus
ENSMAMG00000015092	usb1	83	50.644	ENSCAFG00000008556	USB1	71	48.188	Canis_familiaris
ENSMAMG00000015092	usb1	99	47.101	ENSCAFG00020009263	USB1	98	47.101	Canis_lupus_dingo
ENSMAMG00000015092	usb1	99	48.561	ENSCHIG00000024290	USB1	98	48.561	Capra_hircus
ENSMAMG00000015092	usb1	83	51.502	ENSTSYG00000006997	USB1	98	48.387	Carlito_syrichta
ENSMAMG00000015092	usb1	83	41.810	ENSCAPG00000009057	USB1	100	41.810	Cavia_aperea
ENSMAMG00000015092	usb1	99	48.921	ENSCPOG00000014325	USB1	98	48.921	Cavia_porcellus
ENSMAMG00000015092	usb1	81	53.097	ENSCCAG00000022132	USB1	98	48.375	Cebus_capucinus
ENSMAMG00000015092	usb1	83	52.361	ENSCATG00000032174	USB1	98	48.375	Cercocebus_atys
ENSMAMG00000015092	usb1	62	53.757	ENSCLAG00000007363	USB1	87	55.556	Chinchilla_lanigera
ENSMAMG00000015092	usb1	83	51.931	ENSCSAG00000004783	USB1	98	48.014	Chlorocebus_sabaeus
ENSMAMG00000015092	usb1	83	55.411	ENSCPBG00000026943	USB1	98	51.601	Chrysemys_picta_bellii
ENSMAMG00000015092	usb1	81	31.602	ENSCING00000011490	-	87	30.472	Ciona_intestinalis
ENSMAMG00000015092	usb1	83	52.790	ENSCANG00000037135	USB1	98	48.913	Colobus_angolensis_palliatus
ENSMAMG00000015092	usb1	99	49.640	ENSCGRG00001011243	USB1	98	49.640	Cricetulus_griseus_chok1gshd
ENSMAMG00000015092	usb1	99	49.640	ENSCGRG00000013252	USB1	98	49.640	Cricetulus_griseus_crigri
ENSMAMG00000015092	usb1	100	68.345	ENSCSEG00000013881	usb1	99	68.345	Cynoglossus_semilaevis
ENSMAMG00000015092	usb1	81	77.193	ENSCVAG00000009252	usb1	98	77.193	Cyprinodon_variegatus
ENSMAMG00000015092	usb1	99	56.115	ENSDARG00000003841	usb1	100	56.115	Danio_rerio
ENSMAMG00000015092	usb1	99	47.292	ENSDORG00000001888	Usb1	98	48.387	Dipodomys_ordii
ENSMAMG00000015092	usb1	76	40.187	FBgn0037713	CG16790	80	39.906	Drosophila_melanogaster
ENSMAMG00000015092	usb1	99	42.086	ENSETEG00000019682	USB1	98	42.086	Echinops_telfairi
ENSMAMG00000015092	usb1	92	43.511	ENSEBUG00000005889	usb1	98	39.048	Eptatretus_burgeri
ENSMAMG00000015092	usb1	99	48.921	ENSEASG00005005484	USB1	98	48.921	Equus_asinus_asinus
ENSMAMG00000015092	usb1	99	49.097	ENSECAG00000019493	USB1	89	49.097	Equus_caballus
ENSMAMG00000015092	usb1	62	50.289	ENSEEUG00000000154	USB1	58	50.980	Erinaceus_europaeus
ENSMAMG00000015092	usb1	86	63.223	ENSELUG00000010974	usb1	99	59.353	Esox_lucius
ENSMAMG00000015092	usb1	87	50.000	ENSFCAG00000002693	USB1	98	48.014	Felis_catus
ENSMAMG00000015092	usb1	82	54.348	ENSFALG00000006876	USB1	98	50.362	Ficedula_albicollis
ENSMAMG00000015092	usb1	99	48.201	ENSFDAG00000010052	USB1	98	48.201	Fukomys_damarensis
ENSMAMG00000015092	usb1	88	69.106	ENSFHEG00000012334	usb1	98	69.919	Fundulus_heteroclitus
ENSMAMG00000015092	usb1	80	73.874	ENSGMOG00000004228	usb1	99	73.874	Gadus_morhua
ENSMAMG00000015092	usb1	79	55.605	ENSGALG00000035604	USB1	98	49.458	Gallus_gallus
ENSMAMG00000015092	usb1	99	74.552	ENSGAFG00000021890	usb1	99	74.552	Gambusia_affinis
ENSMAMG00000015092	usb1	100	75.540	ENSGACG00000003257	usb1	100	76.344	Gasterosteus_aculeatus
ENSMAMG00000015092	usb1	99	52.536	ENSGAGG00000022572	USB1	98	52.536	Gopherus_agassizii
ENSMAMG00000015092	usb1	83	51.931	ENSGGOG00000017147	USB1	98	48.375	Gorilla_gorilla
ENSMAMG00000015092	usb1	99	71.326	ENSHBUG00000009823	usb1	99	73.118	Haplochromis_burtoni
ENSMAMG00000015092	usb1	99	49.097	ENSHGLG00000016078	USB1	96	49.097	Heterocephalus_glaber_female
ENSMAMG00000015092	usb1	99	49.097	ENSHGLG00100005562	USB1	96	49.097	Heterocephalus_glaber_male
ENSMAMG00000015092	usb1	78	75.229	ENSHCOG00000015633	usb1	99	64.311	Hippocampus_comes
ENSMAMG00000015092	usb1	99	56.597	ENSIPUG00000008601	usb1	100	56.597	Ictalurus_punctatus
ENSMAMG00000015092	usb1	99	48.736	ENSSTOG00000007548	USB1	98	48.571	Ictidomys_tridecemlineatus
ENSMAMG00000015092	usb1	99	49.640	ENSJJAG00000021859	Usb1	98	49.640	Jaculus_jaculus
ENSMAMG00000015092	usb1	96	71.429	ENSKMAG00000007200	usb1	99	69.310	Kryptolebias_marmoratus
ENSMAMG00000015092	usb1	97	68.613	ENSLBEG00000008452	usb1	86	68.613	Labrus_bergylta
ENSMAMG00000015092	usb1	68	57.592	ENSLACG00000000105	USB1	86	50.602	Latimeria_chalumnae
ENSMAMG00000015092	usb1	80	58.482	ENSLOCG00000000465	usb1	99	51.246	Lepisosteus_oculatus
ENSMAMG00000015092	usb1	99	41.053	ENSLAFG00000002267	USB1	98	39.792	Loxodonta_africana
ENSMAMG00000015092	usb1	83	52.361	ENSMFAG00000003926	USB1	98	48.375	Macaca_fascicularis
ENSMAMG00000015092	usb1	83	52.361	ENSMMUG00000022669	USB1	98	48.375	Macaca_mulatta
ENSMAMG00000015092	usb1	83	51.931	ENSMNEG00000042487	USB1	98	48.014	Macaca_nemestrina
ENSMAMG00000015092	usb1	83	52.361	ENSMLEG00000028756	USB1	98	48.375	Mandrillus_leucophaeus
ENSMAMG00000015092	usb1	99	70.609	ENSMZEG00005010008	usb1	99	72.401	Maylandia_zebra
ENSMAMG00000015092	usb1	99	50.000	ENSMAUG00000007832	Usb1	98	50.000	Mesocricetus_auratus
ENSMAMG00000015092	usb1	80	54.018	ENSMICG00000004900	USB1	98	49.281	Microcebus_murinus
ENSMAMG00000015092	usb1	99	50.181	ENSMOCG00000022647	Usb1	98	50.181	Microtus_ochrogaster
ENSMAMG00000015092	usb1	82	75.439	ENSMMOG00000000490	usb1	100	67.266	Mola_mola
ENSMAMG00000015092	usb1	78	52.995	ENSMODG00000014067	USB1	99	48.561	Monodelphis_domestica
ENSMAMG00000015092	usb1	99	77.224	ENSMALG00000005930	usb1	99	78.648	Monopterus_albus
ENSMAMG00000015092	usb1	99	50.360	MGP_CAROLIEiJ_G0031421	Usb1	99	51.786	Mus_caroli
ENSMAMG00000015092	usb1	99	50.360	ENSMUSG00000031792	Usb1	99	51.786	Mus_musculus
ENSMAMG00000015092	usb1	99	49.819	MGP_PahariEiJ_G0023019	Usb1	100	52.991	Mus_pahari
ENSMAMG00000015092	usb1	99	50.360	MGP_SPRETEiJ_G0032540	Usb1	98	50.360	Mus_spretus
ENSMAMG00000015092	usb1	99	47.703	ENSMPUG00000004684	USB1	94	49.281	Mustela_putorius_furo
ENSMAMG00000015092	usb1	80	54.911	ENSMLUG00000007400	USB1	97	54.911	Myotis_lucifugus
ENSMAMG00000015092	usb1	99	50.181	ENSNGAG00000009703	Usb1	98	50.903	Nannospalax_galili
ENSMAMG00000015092	usb1	99	65.950	ENSNBRG00000008747	usb1	99	75.587	Neolamprologus_brichardi
ENSMAMG00000015092	usb1	77	52.804	ENSNLEG00000003340	USB1	96	48.837	Nomascus_leucogenys
ENSMAMG00000015092	usb1	99	50.181	ENSODEG00000016214	USB1	98	50.181	Octodon_degus
ENSMAMG00000015092	usb1	99	74.460	ENSONIG00000011063	usb1	100	74.460	Oreochromis_niloticus
ENSMAMG00000015092	usb1	80	52.444	ENSOANG00000012118	USB1	94	52.444	Ornithorhynchus_anatinus
ENSMAMG00000015092	usb1	99	70.758	ENSORLG00000012479	usb1	99	70.758	Oryzias_latipes
ENSMAMG00000015092	usb1	86	76.050	ENSORLG00020018671	usb1	99	70.504	Oryzias_latipes_hni
ENSMAMG00000015092	usb1	94	71.538	ENSORLG00015009679	usb1	99	70.758	Oryzias_latipes_hsok
ENSMAMG00000015092	usb1	99	71.841	ENSOMEG00000012930	usb1	99	72.401	Oryzias_melastigma
ENSMAMG00000015092	usb1	84	48.511	ENSOGAG00000003273	USB1	98	46.403	Otolemur_garnettii
ENSMAMG00000015092	usb1	95	48.679	ENSOARG00000001107	USB1	97	48.679	Ovis_aries
ENSMAMG00000015092	usb1	83	51.502	ENSPPAG00000042137	USB1	98	48.014	Pan_paniscus
ENSMAMG00000015092	usb1	86	49.796	ENSPPRG00000024797	USB1	98	47.842	Panthera_pardus
ENSMAMG00000015092	usb1	87	49.180	ENSPTIG00000007506	USB1	98	47.292	Panthera_tigris_altaica
ENSMAMG00000015092	usb1	83	48.927	ENSPTRG00000008172	USB1	100	54.206	Pan_troglodytes
ENSMAMG00000015092	usb1	83	52.361	ENSPANG00000025138	USB1	98	48.375	Papio_anubis
ENSMAMG00000015092	usb1	81	63.111	ENSPKIG00000015109	usb1	99	53.716	Paramormyrops_kingsleyae
ENSMAMG00000015092	usb1	80	46.222	ENSPSIG00000004305	USB1	100	46.222	Pelodiscus_sinensis
ENSMAMG00000015092	usb1	81	68.750	ENSPMGG00000017725	usb1	99	59.353	Periophthalmus_magnuspinnatus
ENSMAMG00000015092	usb1	99	48.746	ENSPEMG00000016183	Usb1	98	50.179	Peromyscus_maniculatus_bairdii
ENSMAMG00000015092	usb1	80	51.556	ENSPMAG00000000462	usb1	95	51.556	Petromyzon_marinus
ENSMAMG00000015092	usb1	99	74.552	ENSPFOG00000011130	usb1	99	74.552	Poecilia_formosa
ENSMAMG00000015092	usb1	99	74.194	ENSPLAG00000009820	usb1	99	74.194	Poecilia_latipinna
ENSMAMG00000015092	usb1	99	74.910	ENSPMEG00000006402	usb1	99	74.910	Poecilia_mexicana
ENSMAMG00000015092	usb1	88	72.874	ENSPREG00000001047	usb1	99	74.494	Poecilia_reticulata
ENSMAMG00000015092	usb1	77	49.767	ENSPPYG00000007401	USB1	96	46.332	Pongo_abelii
ENSMAMG00000015092	usb1	83	51.502	ENSPCOG00000022612	USB1	98	48.029	Propithecus_coquereli
ENSMAMG00000015092	usb1	99	48.746	ENSPVAG00000004613	USB1	98	48.746	Pteropus_vampyrus
ENSMAMG00000015092	usb1	99	71.685	ENSPNYG00000022262	usb1	99	72.760	Pundamilia_nyererei
ENSMAMG00000015092	usb1	99	58.446	ENSPNAG00000011736	usb1	100	59.459	Pygocentrus_nattereri
ENSMAMG00000015092	usb1	99	50.000	ENSRNOG00000013216	Usb1	98	50.000	Rattus_norvegicus
ENSMAMG00000015092	usb1	83	48.927	ENSRBIG00000044466	USB1	100	54.673	Rhinopithecus_bieti
ENSMAMG00000015092	usb1	83	52.361	ENSRROG00000029211	USB1	98	48.736	Rhinopithecus_roxellana
ENSMAMG00000015092	usb1	81	53.540	ENSSBOG00000029362	USB1	98	48.736	Saimiri_boliviensis_boliviensis
ENSMAMG00000015092	usb1	78	50.917	ENSSHAG00000006993	USB1	99	48.413	Sarcophilus_harrisii
ENSMAMG00000015092	usb1	95	58.647	ENSSFOG00015023663	usb1	91	57.986	Scleropages_formosus
ENSMAMG00000015092	usb1	99	74.150	ENSSMAG00000015834	usb1	99	74.490	Scophthalmus_maximus
ENSMAMG00000015092	usb1	99	75.532	ENSSDUG00000002949	usb1	99	75.532	Seriola_dumerili
ENSMAMG00000015092	usb1	99	79.570	ENSSLDG00000014174	usb1	99	79.570	Seriola_lalandi_dorsalis
ENSMAMG00000015092	usb1	77	52.804	ENSSPUG00000006741	USB1	100	52.804	Sphenodon_punctatus
ENSMAMG00000015092	usb1	100	73.868	ENSSPAG00000007484	usb1	100	74.296	Stegastes_partitus
ENSMAMG00000015092	usb1	85	51.681	ENSSSCG00000002807	USB1	98	48.736	Sus_scrofa
ENSMAMG00000015092	usb1	76	56.398	ENSTGUG00000004792	USB1	87	55.405	Taeniopygia_guttata
ENSMAMG00000015092	usb1	100	67.266	ENSTRUG00000021069	usb1	100	67.266	Takifugu_rubripes
ENSMAMG00000015092	usb1	100	58.065	ENSTNIG00000000626	usb1	98	57.706	Tetraodon_nigroviridis
ENSMAMG00000015092	usb1	80	37.500	ENSTBEG00000001507	USB1	97	37.500	Tupaia_belangeri
ENSMAMG00000015092	usb1	99	48.375	ENSUAMG00000016823	USB1	98	49.640	Ursus_americanus
ENSMAMG00000015092	usb1	77	53.738	ENSUMAG00000021369	USB1	100	53.738	Ursus_maritimus
ENSMAMG00000015092	usb1	97	46.324	ENSVVUG00000023700	USB1	92	49.580	Vulpes_vulpes
ENSMAMG00000015092	usb1	77	53.456	ENSXETG00000013795	usb1	99	46.931	Xenopus_tropicalis
ENSMAMG00000015092	usb1	88	77.328	ENSXMAG00000024687	usb1	81	73.387	Xiphophorus_maculatus