EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000015214 (Gene tree)
Gene ID: 113122942
Gene Symbol: rab20
Alias: fb01f02|wu:fb01f02|wu:fj82g08|zgc:64047
Full Name: RAB20%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 3347 bases
Position: chrOOHQ01000093.1:16961602-16964948
Accession: 113122942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000022608	MMR_HSR1	PF01926.23	9.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000023188	-	789	-	ENSMAMP00000022608	262 (aa)	XP_026150414	UPI000E460D28

Gene Model

Click here to download ENSMAMG00000015214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000015214's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000015214	rab20	51	32.867	ENSMAMG00000010136	rab36	52	32.867
ENSMAMG00000015214	rab20	61	30.178	ENSMAMG00000017431	zgc:101559	68	30.178
ENSMAMG00000015214	rab20	50	30.657	ENSMAMG00000002296	rab42a	60	30.657
ENSMAMG00000015214	rab20	55	32.000	ENSMAMG00000018672	rab34a	56	32.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000015214	rab20	98	91.829	ENSATEG00000011117	rab20	100	91.829	Anabas_testudineus
ENSMAMG00000015214	rab20	98	62.109	ENSAPLG00000011744	RAB20	99	62.109	Anas_platyrhynchos
ENSMAMG00000015214	rab20	97	58.824	ENSACAG00000014045	RAB20	99	58.824	Anolis_carolinensis
ENSMAMG00000015214	rab20	98	67.692	ENSAMXG00000003504	rab20	99	67.954	Astyanax_mexicanus
ENSMAMG00000015214	rab20	97	64.567	ENSCPBG00000005866	RAB20	99	64.567	Chrysemys_picta_bellii
ENSMAMG00000015214	rab20	98	80.469	ENSCSEG00000011160	rab20	100	80.469	Cynoglossus_semilaevis
ENSMAMG00000015214	rab20	100	73.585	ENSDARG00000005049	rab20	99	73.585	Danio_rerio
ENSMAMG00000015214	rab20	99	79.468	ENSELUG00000004092	rab20	100	79.468	Esox_lucius
ENSMAMG00000015214	rab20	98	60.938	ENSFALG00000004409	RAB20	99	60.938	Ficedula_albicollis
ENSMAMG00000015214	rab20	98	85.271	ENSGACG00000003527	rab20	100	85.271	Gasterosteus_aculeatus
ENSMAMG00000015214	rab20	100	82.824	ENSHCOG00000013468	rab20	100	82.824	Hippocampus_comes
ENSMAMG00000015214	rab20	98	70.039	ENSIPUG00000000432	RAB20	97	71.595	Ictalurus_punctatus
ENSMAMG00000015214	rab20	98	70.039	ENSIPUG00000018288	RAB20	97	71.595	Ictalurus_punctatus
ENSMAMG00000015214	rab20	97	64.202	ENSLACG00000011001	RAB20	99	64.202	Latimeria_chalumnae
ENSMAMG00000015214	rab20	98	82.101	ENSMMOG00000020022	rab20	100	82.101	Mola_mola
ENSMAMG00000015214	rab20	98	59.766	ENSMEUG00000009442	RAB20	99	59.766	Notamacropus_eugenii
ENSMAMG00000015214	rab20	85	47.186	ENSPMAG00000004439	rab20	99	48.052	Petromyzon_marinus
ENSMAMG00000015214	rab20	98	69.231	ENSPNAG00000008867	rab20	99	71.484	Pygocentrus_nattereri
ENSMAMG00000015214	rab20	98	87.938	ENSSMAG00000018818	rab20	100	87.938	Scophthalmus_maximus
ENSMAMG00000015214	rab20	100	93.156	ENSSDUG00000005148	rab20	100	93.156	Seriola_dumerili
ENSMAMG00000015214	rab20	98	62.109	ENSTGUG00000008797	RAB20	99	62.109	Taeniopygia_guttata
ENSMAMG00000015214	rab20	100	83.270	ENSTRUG00000022951	rab20	100	83.270	Takifugu_rubripes
ENSMAMG00000015214	rab20	92	76.860	ENSTNIG00000013920	rab20	100	76.172	Tetraodon_nigroviridis