EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000015216 (Gene tree)
Gene ID: 113134371
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC113134371
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 1674 bases
Position: chrOOHQ01000035.1:23229804-23231477
Accession: 113134371
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000022601	MMR_HSR1	PF01926.23	2.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000023181	-	1674	-	ENSMAMP00000022601	557 (aa)	XP_026169512	UPI000E459616

Gene Model

Click here to download ENSMAMG00000015216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000015216's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000015216	-	93	32.890	ENSMAMG00000011609	-	91	32.890
ENSMAMG00000015216	-	87	32.056	ENSMAMG00000011602	-	80	32.056
ENSMAMG00000015216	-	93	31.450	ENSMAMG00000011595	-	93	31.450
ENSMAMG00000015216	-	85	33.333	ENSMAMG00000012597	-	88	33.333
ENSMAMG00000015216	-	100	95.332	ENSMAMG00000015097	-	100	95.332
ENSMAMG00000015216	-	89	31.683	ENSMAMG00000012877	-	90	31.881
ENSMAMG00000015216	-	88	31.055	ENSMAMG00000012903	-	89	31.055
ENSMAMG00000015216	-	91	30.469	ENSMAMG00000011589	-	91	30.664
ENSMAMG00000015216	-	89	32.475	ENSMAMG00000011624	-	95	32.475
ENSMAMG00000015216	-	100	95.691	ENSMAMG00000015247	-	100	95.691

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000015216	-	89	59.596	ENSAPOG00000015792	-	87	59.596	Acanthochromis_polyacanthus
ENSMAMG00000015216	-	96	57.678	ENSAPOG00000015784	-	88	57.328	Acanthochromis_polyacanthus
ENSMAMG00000015216	-	99	67.568	ENSACIG00000009923	-	89	68.108	Amphilophus_citrinellus
ENSMAMG00000015216	-	89	72.032	ENSACIG00000022228	-	84	72.032	Amphilophus_citrinellus
ENSMAMG00000015216	-	96	65.299	ENSAOCG00000015171	-	50	65.299	Amphiprion_ocellaris
ENSMAMG00000015216	-	96	65.112	ENSAPEG00000005793	-	99	65.112	Amphiprion_percula
ENSMAMG00000015216	-	98	70.803	ENSATEG00000009097	-	92	70.803	Anabas_testudineus
ENSMAMG00000015216	-	99	70.270	ENSACLG00000023481	-	99	70.270	Astatotilapia_calliptera
ENSMAMG00000015216	-	97	73.297	ENSACLG00000023474	-	97	73.297	Astatotilapia_calliptera
ENSMAMG00000015216	-	96	57.728	ENSCVAG00000018327	-	90	57.728	Cyprinodon_variegatus
ENSMAMG00000015216	-	97	58.519	ENSFHEG00000011074	-	83	58.519	Fundulus_heteroclitus
ENSMAMG00000015216	-	96	57.914	ENSFHEG00000008149	-	81	57.914	Fundulus_heteroclitus
ENSMAMG00000015216	-	99	67.870	ENSFHEG00000021969	-	99	67.870	Fundulus_heteroclitus
ENSMAMG00000015216	-	99	70.631	ENSHBUG00000021307	-	99	70.631	Haplochromis_burtoni
ENSMAMG00000015216	-	97	71.767	ENSHBUG00000012995	-	97	71.949	Haplochromis_burtoni
ENSMAMG00000015216	-	96	68.140	ENSKMAG00000016903	-	72	68.140	Kryptolebias_marmoratus
ENSMAMG00000015216	-	96	62.082	ENSKMAG00000016981	-	85	62.082	Kryptolebias_marmoratus
ENSMAMG00000015216	-	92	46.408	ENSLACG00000008367	-	99	46.990	Latimeria_chalumnae
ENSMAMG00000015216	-	97	73.665	ENSMZEG00005020274	-	97	73.665	Maylandia_zebra
ENSMAMG00000015216	-	98	68.727	ENSMZEG00005020281	-	91	68.727	Maylandia_zebra
ENSMAMG00000015216	-	89	74.749	ENSNBRG00000016760	-	98	74.749	Neolamprologus_brichardi
ENSMAMG00000015216	-	91	73.477	ENSNBRG00000022932	-	91	73.477	Neolamprologus_brichardi
ENSMAMG00000015216	-	97	68.670	ENSNBRG00000016799	-	95	68.852	Neolamprologus_brichardi
ENSMAMG00000015216	-	87	73.566	ENSONIG00000012363	-	99	73.566	Oreochromis_niloticus
ENSMAMG00000015216	-	97	55.755	ENSPKIG00000011996	-	96	55.755	Paramormyrops_kingsleyae
ENSMAMG00000015216	-	96	58.118	ENSPKIG00000009271	-	89	58.118	Paramormyrops_kingsleyae
ENSMAMG00000015216	-	66	67.568	ENSPMGG00000000605	-	83	67.568	Periophthalmus_magnuspinnatus
ENSMAMG00000015216	-	96	66.791	ENSPFOG00000010758	-	83	66.791	Poecilia_formosa
ENSMAMG00000015216	-	96	66.791	ENSPLAG00000010093	-	70	66.791	Poecilia_latipinna
ENSMAMG00000015216	-	96	59.963	ENSPLAG00000000406	-	98	59.963	Poecilia_latipinna
ENSMAMG00000015216	-	91	58.580	ENSPLAG00000005002	-	97	58.580	Poecilia_latipinna
ENSMAMG00000015216	-	97	57.274	ENSPMEG00000015576	-	51	57.274	Poecilia_mexicana
ENSMAMG00000015216	-	96	59.777	ENSPMEG00000014712	-	81	59.777	Poecilia_mexicana
ENSMAMG00000015216	-	93	66.411	ENSPREG00000021204	-	96	66.795	Poecilia_reticulata
ENSMAMG00000015216	-	96	71.561	ENSSMAG00000004663	-	87	71.561	Scophthalmus_maximus
ENSMAMG00000015216	-	93	73.462	ENSSDUG00000004257	-	93	73.462	Seriola_dumerili
ENSMAMG00000015216	-	96	71.322	ENSSLDG00000021625	-	95	71.322	Seriola_lalandi_dorsalis
ENSMAMG00000015216	-	96	67.904	ENSSPAG00000003320	-	91	68.275	Stegastes_partitus
ENSMAMG00000015216	-	91	61.144	ENSXMAG00000023457	-	96	61.144	Xiphophorus_maculatus
ENSMAMG00000015216	-	97	59.041	ENSXMAG00000022709	-	82	59.041	Xiphophorus_maculatus