EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000015247 (Gene tree)
Gene ID: 113134372
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC113134372
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 1674 bases
Position: chrOOHQ01000035.1:23249287-23250960
Accession: 113134372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000022652	MMR_HSR1	PF01926.23	4.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000023232	-	1674	-	ENSMAMP00000022652	557 (aa)	XP_026169513	UPI000E460ED4

Gene Model

Click here to download ENSMAMG00000015247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000015247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000015247	-	93	33.270	ENSMAMG00000011609	-	91	33.270
ENSMAMG00000015247	-	87	32.661	ENSMAMG00000011602	-	80	32.661
ENSMAMG00000015247	-	95	32.282	ENSMAMG00000012877	-	95	32.222
ENSMAMG00000015247	-	93	32.015	ENSMAMG00000011595	-	93	32.015
ENSMAMG00000015247	-	89	33.069	ENSMAMG00000011624	-	95	33.069
ENSMAMG00000015247	-	100	95.691	ENSMAMG00000015216	-	100	95.691
ENSMAMG00000015247	-	91	32.879	ENSMAMG00000012597	-	93	32.879
ENSMAMG00000015247	-	94	31.296	ENSMAMG00000012903	-	93	31.296
ENSMAMG00000015247	-	91	30.604	ENSMAMG00000011589	-	91	30.799
ENSMAMG00000015247	-	100	95.153	ENSMAMG00000015097	-	100	95.153

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000015247	-	96	59.176	ENSAPOG00000015784	-	88	58.813	Acanthochromis_polyacanthus
ENSMAMG00000015247	-	89	61.212	ENSAPOG00000015792	-	87	61.212	Acanthochromis_polyacanthus
ENSMAMG00000015247	-	91	72.016	ENSACIG00000022228	-	86	72.016	Amphilophus_citrinellus
ENSMAMG00000015247	-	99	69.369	ENSACIG00000009923	-	89	69.910	Amphilophus_citrinellus
ENSMAMG00000015247	-	96	66.978	ENSAOCG00000015171	-	50	66.978	Amphiprion_ocellaris
ENSMAMG00000015247	-	96	66.231	ENSAPEG00000005793	-	99	66.231	Amphiprion_percula
ENSMAMG00000015247	-	99	71.688	ENSATEG00000009097	-	93	71.688	Anabas_testudineus
ENSMAMG00000015247	-	97	74.770	ENSACLG00000023474	-	97	74.770	Astatotilapia_calliptera
ENSMAMG00000015247	-	97	72.426	ENSACLG00000023481	-	97	72.426	Astatotilapia_calliptera
ENSMAMG00000015247	-	96	59.404	ENSCVAG00000018327	-	90	59.404	Cyprinodon_variegatus
ENSMAMG00000015247	-	99	69.675	ENSFHEG00000021969	-	99	69.675	Fundulus_heteroclitus
ENSMAMG00000015247	-	96	59.590	ENSFHEG00000008149	-	81	59.590	Fundulus_heteroclitus
ENSMAMG00000015247	-	97	59.259	ENSFHEG00000011074	-	83	59.259	Fundulus_heteroclitus
ENSMAMG00000015247	-	99	71.712	ENSHBUG00000021307	-	99	71.712	Haplochromis_burtoni
ENSMAMG00000015247	-	97	73.224	ENSHBUG00000012995	-	97	73.406	Haplochromis_burtoni
ENSMAMG00000015247	-	97	62.883	ENSKMAG00000016981	-	88	62.883	Kryptolebias_marmoratus
ENSMAMG00000015247	-	96	69.982	ENSKMAG00000016903	-	72	69.982	Kryptolebias_marmoratus
ENSMAMG00000015247	-	92	47.961	ENSLACG00000008367	-	99	48.544	Latimeria_chalumnae
ENSMAMG00000015247	-	98	69.636	ENSMZEG00005020281	-	91	69.636	Maylandia_zebra
ENSMAMG00000015247	-	97	75.138	ENSMZEG00005020274	-	97	75.138	Maylandia_zebra
ENSMAMG00000015247	-	97	69.763	ENSNBRG00000016799	-	95	69.945	Neolamprologus_brichardi
ENSMAMG00000015247	-	91	74.460	ENSNBRG00000022932	-	91	74.460	Neolamprologus_brichardi
ENSMAMG00000015247	-	89	76.152	ENSNBRG00000016760	-	98	76.152	Neolamprologus_brichardi
ENSMAMG00000015247	-	87	76.230	ENSONIG00000012363	-	99	76.230	Oreochromis_niloticus
ENSMAMG00000015247	-	97	57.194	ENSPKIG00000011996	-	96	57.194	Paramormyrops_kingsleyae
ENSMAMG00000015247	-	96	59.594	ENSPKIG00000009271	-	89	59.594	Paramormyrops_kingsleyae
ENSMAMG00000015247	-	69	70.270	ENSPMGG00000000605	-	83	70.270	Periophthalmus_magnuspinnatus
ENSMAMG00000015247	-	96	68.470	ENSPFOG00000010758	-	83	68.470	Poecilia_formosa
ENSMAMG00000015247	-	96	60.894	ENSPLAG00000000406	-	98	60.894	Poecilia_latipinna
ENSMAMG00000015247	-	92	59.884	ENSPLAG00000005002	-	99	59.884	Poecilia_latipinna
ENSMAMG00000015247	-	96	68.470	ENSPLAG00000010093	-	70	68.470	Poecilia_latipinna
ENSMAMG00000015247	-	96	60.894	ENSPMEG00000014712	-	81	60.894	Poecilia_mexicana
ENSMAMG00000015247	-	97	58.932	ENSPMEG00000015576	-	51	58.932	Poecilia_mexicana
ENSMAMG00000015247	-	93	68.522	ENSPREG00000021204	-	96	68.906	Poecilia_reticulata
ENSMAMG00000015247	-	96	73.606	ENSSMAG00000004663	-	87	73.606	Scophthalmus_maximus
ENSMAMG00000015247	-	93	76.154	ENSSDUG00000004257	-	93	76.154	Seriola_dumerili
ENSMAMG00000015247	-	96	72.439	ENSSLDG00000021625	-	95	72.439	Seriola_lalandi_dorsalis
ENSMAMG00000015247	-	96	69.017	ENSSPAG00000003320	-	91	69.388	Stegastes_partitus
ENSMAMG00000015247	-	91	62.722	ENSXMAG00000023457	-	96	62.722	Xiphophorus_maculatus
ENSMAMG00000015247	-	97	61.070	ENSXMAG00000022709	-	82	61.070	Xiphophorus_maculatus