EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000015431 (Gene tree)
Gene ID: 113139847
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 7013 bases
Position: chrOOHQ01000042.1:12997803-13004815
Accession: 113139847
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000022943	PRP38	PF03371.15	1.2e-63	1	1
ENSMAMP00000022929	PRP38	PF03371.15	1.3e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000023514	-	4021	-	ENSMAMP00000022929	309 (aa)	XP_026179216	UPI000E45689F
ENSMAMT00000023530	-	1031	-	ENSMAMP00000022943	298 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000015431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000015431's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000015431	prpf38a	100	81.470	ENSG00000134748	PRPF38A	71	88.235	Homo_sapiens
ENSMAMG00000015431	prpf38a	100	98.382	ENSAPOG00000011652	prpf38a	100	98.382	Acanthochromis_polyacanthus
ENSMAMG00000015431	prpf38a	100	81.470	ENSAMEG00000009319	PRPF38A	71	88.235	Ailuropoda_melanoleuca
ENSMAMG00000015431	prpf38a	100	94.498	ENSACIG00000012292	prpf38a	100	94.498	Amphilophus_citrinellus
ENSMAMG00000015431	prpf38a	100	98.382	ENSAOCG00000018004	prpf38a	100	98.382	Amphiprion_ocellaris
ENSMAMG00000015431	prpf38a	100	98.382	ENSAPEG00000021414	prpf38a	100	98.382	Amphiprion_percula
ENSMAMG00000015431	prpf38a	100	95.469	ENSATEG00000004608	prpf38a	72	94.118	Anabas_testudineus
ENSMAMG00000015431	prpf38a	79	78.226	ENSAPLG00000005827	PRPF38A	63	85.897	Anas_platyrhynchos
ENSMAMG00000015431	prpf38a	100	82.109	ENSACAG00000008249	PRPF38A	71	89.140	Anolis_carolinensis
ENSMAMG00000015431	prpf38a	100	81.470	ENSANAG00000027839	PRPF38A	71	88.235	Aotus_nancymaae
ENSMAMG00000015431	prpf38a	100	60.000	ENSANAG00000029204	-	70	56.000	Aotus_nancymaae
ENSMAMG00000015431	prpf38a	100	97.087	ENSACLG00000021595	prpf38a	100	97.087	Astatotilapia_calliptera
ENSMAMG00000015431	prpf38a	100	85.304	ENSAMXG00000029274	prpf38a	71	94.570	Astyanax_mexicanus
ENSMAMG00000015431	prpf38a	100	81.470	ENSBTAG00000002720	PRPF38A	75	88.235	Bos_taurus
ENSMAMG00000015431	prpf38a	65	64.103	WBGene00008380	prp-38	59	65.957	Caenorhabditis_elegans
ENSMAMG00000015431	prpf38a	100	81.470	ENSCJAG00000021594	PRPF38A	74	88.235	Callithrix_jacchus
ENSMAMG00000015431	prpf38a	100	81.470	ENSCAFG00000003740	PRPF38A	71	88.235	Canis_familiaris
ENSMAMG00000015431	prpf38a	100	81.470	ENSCAFG00020010939	PRPF38A	71	88.235	Canis_lupus_dingo
ENSMAMG00000015431	prpf38a	100	81.470	ENSCHIG00000024730	PRPF38A	71	88.235	Capra_hircus
ENSMAMG00000015431	prpf38a	86	77.778	ENSTSYG00000031994	-	63	84.831	Carlito_syrichta
ENSMAMG00000015431	prpf38a	100	81.470	ENSTSYG00000009868	-	71	88.235	Carlito_syrichta
ENSMAMG00000015431	prpf38a	100	82.958	ENSCPOG00000005079	PRPF38A	71	88.235	Cavia_porcellus
ENSMAMG00000015431	prpf38a	100	79.167	ENSCCAG00000026502	PRPF38A	71	88.235	Cebus_capucinus
ENSMAMG00000015431	prpf38a	100	81.470	ENSCATG00000032296	PRPF38A	71	88.235	Cercocebus_atys
ENSMAMG00000015431	prpf38a	93	53.979	ENSCATG00000044190	-	57	55.851	Cercocebus_atys
ENSMAMG00000015431	prpf38a	100	81.470	ENSCLAG00000005816	PRPF38A	71	88.235	Chinchilla_lanigera
ENSMAMG00000015431	prpf38a	100	81.789	ENSCPBG00000014791	PRPF38A	71	88.688	Chrysemys_picta_bellii
ENSMAMG00000015431	prpf38a	78	69.697	ENSCSAVG00000009580	-	71	71.889	Ciona_savignyi
ENSMAMG00000015431	prpf38a	78	87.446	ENSCANG00000032608	PRPF38A	74	88.235	Colobus_angolensis_palliatus
ENSMAMG00000015431	prpf38a	88	70.881	ENSCGRG00001002557	-	74	74.661	Cricetulus_griseus_chok1gshd
ENSMAMG00000015431	prpf38a	100	81.470	ENSCGRG00001018502	-	71	88.235	Cricetulus_griseus_chok1gshd
ENSMAMG00000015431	prpf38a	100	81.470	ENSCGRG00000014868	Prpf38a	71	88.235	Cricetulus_griseus_crigri
ENSMAMG00000015431	prpf38a	95	94.218	ENSCSEG00000001269	prpf38a	76	94.144	Cynoglossus_semilaevis
ENSMAMG00000015431	prpf38a	100	96.764	ENSCVAG00000012305	prpf38a	100	96.764	Cyprinodon_variegatus
ENSMAMG00000015431	prpf38a	100	84.665	ENSDARG00000039213	prpf38a	71	94.118	Danio_rerio
ENSMAMG00000015431	prpf38a	100	81.470	ENSDNOG00000042326	PRPF38A	72	88.235	Dasypus_novemcinctus
ENSMAMG00000015431	prpf38a	88	74.046	ENSDORG00000025371	-	75	80.734	Dipodomys_ordii
ENSMAMG00000015431	prpf38a	88	74.046	ENSDORG00000023691	-	75	80.734	Dipodomys_ordii
ENSMAMG00000015431	prpf38a	100	69.010	ENSDORG00000023857	-	80	96.875	Dipodomys_ordii
ENSMAMG00000015431	prpf38a	94	56.507	FBgn0050342	Prp38	57	74.468	Drosophila_melanogaster
ENSMAMG00000015431	prpf38a	80	81.172	ENSEBUG00000012588	prpf38a	71	80.717	Eptatretus_burgeri
ENSMAMG00000015431	prpf38a	100	81.470	ENSEASG00005014427	PRPF38A	71	88.235	Equus_asinus_asinus
ENSMAMG00000015431	prpf38a	100	81.470	ENSECAG00000022628	PRPF38A	71	88.235	Equus_caballus
ENSMAMG00000015431	prpf38a	100	94.822	ENSELUG00000021094	prpf38a	100	94.822	Esox_lucius
ENSMAMG00000015431	prpf38a	100	81.470	ENSFCAG00000002518	PRPF38A	71	88.235	Felis_catus
ENSMAMG00000015431	prpf38a	99	76.452	ENSFALG00000003612	-	73	84.404	Ficedula_albicollis
ENSMAMG00000015431	prpf38a	87	79.779	ENSFALG00000005598	-	66	87.222	Ficedula_albicollis
ENSMAMG00000015431	prpf38a	100	82.637	ENSFDAG00000011287	PRPF38A	72	88.235	Fukomys_damarensis
ENSMAMG00000015431	prpf38a	90	83.154	ENSFHEG00000014317	prpf38a	75	95.023	Fundulus_heteroclitus
ENSMAMG00000015431	prpf38a	56	97.590	ENSGMOG00000011384	prpf38a	54	97.590	Gadus_morhua
ENSMAMG00000015431	prpf38a	100	82.428	ENSGALG00000010627	PRPF38A	71	89.593	Gallus_gallus
ENSMAMG00000015431	prpf38a	100	96.440	ENSGAFG00000012422	prpf38a	100	96.440	Gambusia_affinis
ENSMAMG00000015431	prpf38a	54	94.706	ENSGACG00000000182	-	100	94.706	Gasterosteus_aculeatus
ENSMAMG00000015431	prpf38a	74	94.619	ENSGACG00000005423	prpf38a	72	94.619	Gasterosteus_aculeatus
ENSMAMG00000015431	prpf38a	100	81.789	ENSGAGG00000020547	PRPF38A	71	88.688	Gopherus_agassizii
ENSMAMG00000015431	prpf38a	100	81.470	ENSGGOG00000003940	PRPF38A	71	88.235	Gorilla_gorilla
ENSMAMG00000015431	prpf38a	68	97.537	ENSHBUG00000020572	prpf38a	86	97.537	Haplochromis_burtoni
ENSMAMG00000015431	prpf38a	100	81.470	ENSHGLG00000000475	PRPF38A	71	88.235	Heterocephalus_glaber_female
ENSMAMG00000015431	prpf38a	100	73.633	ENSHGLG00000007918	-	71	76.018	Heterocephalus_glaber_female
ENSMAMG00000015431	prpf38a	100	81.470	ENSHGLG00100008935	PRPF38A	71	88.235	Heterocephalus_glaber_male
ENSMAMG00000015431	prpf38a	100	73.633	ENSHGLG00100003928	-	71	76.018	Heterocephalus_glaber_male
ENSMAMG00000015431	prpf38a	61	93.956	ENSHCOG00000020781	prpf38a	59	94.149	Hippocampus_comes
ENSMAMG00000015431	prpf38a	90	80.212	ENSIPUG00000005757	prpf38a	71	91.892	Ictalurus_punctatus
ENSMAMG00000015431	prpf38a	100	81.470	ENSSTOG00000015610	PRPF38A	71	88.235	Ictidomys_tridecemlineatus
ENSMAMG00000015431	prpf38a	100	81.470	ENSJJAG00000015811	Prpf38a	71	88.235	Jaculus_jaculus
ENSMAMG00000015431	prpf38a	100	96.440	ENSKMAG00000006588	prpf38a	100	96.440	Kryptolebias_marmoratus
ENSMAMG00000015431	prpf38a	100	95.469	ENSLBEG00000020585	prpf38a	100	95.469	Labrus_bergylta
ENSMAMG00000015431	prpf38a	100	82.428	ENSLACG00000011495	PRPF38A	71	88.688	Latimeria_chalumnae
ENSMAMG00000015431	prpf38a	100	92.258	ENSLOCG00000006262	prpf38a	72	90.991	Lepisosteus_oculatus
ENSMAMG00000015431	prpf38a	100	81.470	ENSLAFG00000025862	PRPF38A	71	88.235	Loxodonta_africana
ENSMAMG00000015431	prpf38a	100	81.470	ENSMFAG00000039449	PRPF38A	74	88.235	Macaca_fascicularis
ENSMAMG00000015431	prpf38a	87	78.676	ENSMMUG00000014333	PRPF38A	65	85.083	Macaca_mulatta
ENSMAMG00000015431	prpf38a	93	53.287	ENSMNEG00000040242	-	65	57.971	Macaca_nemestrina
ENSMAMG00000015431	prpf38a	100	81.470	ENSMNEG00000031221	PRPF38A	71	88.235	Macaca_nemestrina
ENSMAMG00000015431	prpf38a	100	81.470	ENSMLEG00000041105	PRPF38A	71	88.235	Mandrillus_leucophaeus
ENSMAMG00000015431	prpf38a	100	97.087	ENSMZEG00005017838	prpf38a	100	97.087	Maylandia_zebra
ENSMAMG00000015431	prpf38a	78	88.745	ENSMGAG00000011176	PRPF38A	74	89.593	Meleagris_gallopavo
ENSMAMG00000015431	prpf38a	88	82.576	ENSMAUG00000018029	-	84	83.710	Mesocricetus_auratus
ENSMAMG00000015431	prpf38a	100	81.470	ENSMICG00000014193	PRPF38A	71	88.235	Microcebus_murinus
ENSMAMG00000015431	prpf38a	100	81.470	ENSMOCG00000013080	Prpf38a	71	88.235	Microtus_ochrogaster
ENSMAMG00000015431	prpf38a	100	89.389	ENSMMOG00000016972	prpf38a	78	95.475	Mola_mola
ENSMAMG00000015431	prpf38a	100	79.299	ENSMODG00000000644	PRPF38A	71	85.135	Monodelphis_domestica
ENSMAMG00000015431	prpf38a	100	98.382	ENSMALG00000019363	prpf38a	97	98.382	Monopterus_albus
ENSMAMG00000015431	prpf38a	100	81.150	MGP_CAROLIEiJ_G0026269	Prpf38a	71	87.783	Mus_caroli
ENSMAMG00000015431	prpf38a	100	81.150	ENSMUSG00000063800	Prpf38a	71	87.783	Mus_musculus
ENSMAMG00000015431	prpf38a	100	81.150	MGP_PahariEiJ_G0028602	Prpf38a	71	87.783	Mus_pahari
ENSMAMG00000015431	prpf38a	100	80.831	MGP_SPRETEiJ_G0027238	Prpf38a	93	91.489	Mus_spretus
ENSMAMG00000015431	prpf38a	100	81.470	ENSMPUG00000006896	PRPF38A	71	88.235	Mustela_putorius_furo
ENSMAMG00000015431	prpf38a	100	83.280	ENSNGAG00000011884	Prpf38a	72	88.235	Nannospalax_galili
ENSMAMG00000015431	prpf38a	100	94.822	ENSNBRG00000004013	prpf38a	71	95.023	Neolamprologus_brichardi
ENSMAMG00000015431	prpf38a	93	56.014	ENSNLEG00000033398	-	60	51.142	Nomascus_leucogenys
ENSMAMG00000015431	prpf38a	97	62.829	ENSNLEG00000012592	-	67	58.371	Nomascus_leucogenys
ENSMAMG00000015431	prpf38a	93	80.345	ENSNLEG00000017999	PRPF38A	63	87.374	Nomascus_leucogenys
ENSMAMG00000015431	prpf38a	100	77.955	ENSMEUG00000003860	PRPF38A	71	83.258	Notamacropus_eugenii
ENSMAMG00000015431	prpf38a	77	87.719	ENSOPRG00000008985	PRPF38A	92	88.235	Ochotona_princeps
ENSMAMG00000015431	prpf38a	100	81.470	ENSODEG00000005869	PRPF38A	71	88.235	Octodon_degus
ENSMAMG00000015431	prpf38a	100	96.117	ENSONIG00000007816	prpf38a	100	96.117	Oreochromis_niloticus
ENSMAMG00000015431	prpf38a	78	45.064	ENSOANG00000009541	-	71	43.750	Ornithorhynchus_anatinus
ENSMAMG00000015431	prpf38a	100	81.470	ENSOCUG00000000963	PRPF38A	71	88.235	Oryctolagus_cuniculus
ENSMAMG00000015431	prpf38a	99	96.104	ENSORLG00000013485	prpf38a	99	96.104	Oryzias_latipes
ENSMAMG00000015431	prpf38a	99	96.104	ENSORLG00020002130	prpf38a	99	96.104	Oryzias_latipes_hni
ENSMAMG00000015431	prpf38a	99	95.779	ENSORLG00015021393	prpf38a	94	96.043	Oryzias_latipes_hsok
ENSMAMG00000015431	prpf38a	100	95.146	ENSOMEG00000016333	prpf38a	72	94.570	Oryzias_melastigma
ENSMAMG00000015431	prpf38a	100	81.470	ENSOGAG00000005423	PRPF38A	71	88.235	Otolemur_garnettii
ENSMAMG00000015431	prpf38a	100	81.470	ENSOARG00000005373	PRPF38A	71	88.235	Ovis_aries
ENSMAMG00000015431	prpf38a	93	68.459	ENSPPAG00000033867	-	68	69.231	Pan_paniscus
ENSMAMG00000015431	prpf38a	100	81.470	ENSPPAG00000030905	PRPF38A	71	88.235	Pan_paniscus
ENSMAMG00000015431	prpf38a	100	81.470	ENSPPRG00000013268	PRPF38A	71	88.235	Panthera_pardus
ENSMAMG00000015431	prpf38a	100	81.470	ENSPTIG00000015419	PRPF38A	71	88.235	Panthera_tigris_altaica
ENSMAMG00000015431	prpf38a	100	81.470	ENSPTRG00000000739	PRPF38A	74	88.235	Pan_troglodytes
ENSMAMG00000015431	prpf38a	100	81.470	ENSPANG00000015483	PRPF38A	71	88.235	Papio_anubis
ENSMAMG00000015431	prpf38a	100	94.175	ENSPKIG00000011439	prpf38a	72	94.118	Paramormyrops_kingsleyae
ENSMAMG00000015431	prpf38a	100	81.470	ENSPSIG00000017487	PRPF38A	71	88.235	Pelodiscus_sinensis
ENSMAMG00000015431	prpf38a	73	91.244	ENSPMGG00000021352	prpf38a	76	90.950	Periophthalmus_magnuspinnatus
ENSMAMG00000015431	prpf38a	100	79.683	ENSPEMG00000011212	-	70	81.166	Peromyscus_maniculatus_bairdii
ENSMAMG00000015431	prpf38a	100	81.470	ENSPEMG00000023277	-	71	88.235	Peromyscus_maniculatus_bairdii
ENSMAMG00000015431	prpf38a	100	78.981	ENSPCIG00000022369	-	71	84.685	Phascolarctos_cinereus
ENSMAMG00000015431	prpf38a	100	96.440	ENSPFOG00000004248	prpf38a	100	96.440	Poecilia_formosa
ENSMAMG00000015431	prpf38a	100	96.440	ENSPLAG00000010328	prpf38a	100	96.440	Poecilia_latipinna
ENSMAMG00000015431	prpf38a	100	96.440	ENSPMEG00000011804	prpf38a	100	96.440	Poecilia_mexicana
ENSMAMG00000015431	prpf38a	94	80.872	ENSPREG00000002835	prpf38a	58	97.340	Poecilia_reticulata
ENSMAMG00000015431	prpf38a	100	73.585	ENSPPYG00000001348	PRPF38A	71	76.991	Pongo_abelii
ENSMAMG00000015431	prpf38a	100	81.789	ENSPCAG00000013328	PRPF38A	71	88.688	Procavia_capensis
ENSMAMG00000015431	prpf38a	100	66.990	ENSPCOG00000020709	-	73	71.041	Propithecus_coquereli
ENSMAMG00000015431	prpf38a	100	81.470	ENSPCOG00000016387	-	71	88.235	Propithecus_coquereli
ENSMAMG00000015431	prpf38a	100	81.470	ENSPVAG00000009803	PRPF38A	71	88.235	Pteropus_vampyrus
ENSMAMG00000015431	prpf38a	100	97.087	ENSPNYG00000005571	prpf38a	100	97.087	Pundamilia_nyererei
ENSMAMG00000015431	prpf38a	100	84.665	ENSPNAG00000010399	prpf38a	71	93.665	Pygocentrus_nattereri
ENSMAMG00000015431	prpf38a	100	81.789	ENSRNOG00000009451	Prpf38a	71	88.688	Rattus_norvegicus
ENSMAMG00000015431	prpf38a	100	81.470	ENSRBIG00000036442	PRPF38A	74	88.235	Rhinopithecus_bieti
ENSMAMG00000015431	prpf38a	100	81.470	ENSRROG00000032788	PRPF38A	71	88.235	Rhinopithecus_roxellana
ENSMAMG00000015431	prpf38a	98	70.164	ENSRROG00000040003	-	72	71.946	Rhinopithecus_roxellana
ENSMAMG00000015431	prpf38a	100	81.470	ENSSBOG00000019515	PRPF38A	71	88.235	Saimiri_boliviensis_boliviensis
ENSMAMG00000015431	prpf38a	86	76.103	ENSSHAG00000006906	-	66	81.667	Sarcophilus_harrisii
ENSMAMG00000015431	prpf38a	96	66.221	ENSSHAG00000006029	-	74	76.471	Sarcophilus_harrisii
ENSMAMG00000015431	prpf38a	100	93.226	ENSSFOG00015013572	prpf38a	72	90.090	Scleropages_formosus
ENSMAMG00000015431	prpf38a	99	96.417	ENSSMAG00000015379	prpf38a	99	96.417	Scophthalmus_maximus
ENSMAMG00000015431	prpf38a	100	98.058	ENSSDUG00000001324	prpf38a	100	98.058	Seriola_dumerili
ENSMAMG00000015431	prpf38a	100	98.058	ENSSLDG00000014803	prpf38a	100	98.058	Seriola_lalandi_dorsalis
ENSMAMG00000015431	prpf38a	100	64.856	ENSSARG00000014458	PRPF38A	71	64.706	Sorex_araneus
ENSMAMG00000015431	prpf38a	100	81.789	ENSSPUG00000013259	PRPF38A	71	88.688	Sphenodon_punctatus
ENSMAMG00000015431	prpf38a	100	83.172	ENSSPAG00000010449	prpf38a	100	83.172	Stegastes_partitus
ENSMAMG00000015431	prpf38a	100	81.470	ENSSSCG00000028288	PRPF38A	71	88.235	Sus_scrofa
ENSMAMG00000015431	prpf38a	100	78.594	ENSTGUG00000008995	PRPF38A	71	84.163	Taeniopygia_guttata
ENSMAMG00000015431	prpf38a	74	95.023	ENSTRUG00000003374	prpf38a	68	95.023	Takifugu_rubripes
ENSMAMG00000015431	prpf38a	100	94.534	ENSTNIG00000005533	prpf38a	100	94.534	Tetraodon_nigroviridis
ENSMAMG00000015431	prpf38a	100	80.831	ENSTBEG00000000725	PRPF38A	71	88.235	Tupaia_belangeri
ENSMAMG00000015431	prpf38a	100	81.470	ENSTTRG00000016139	PRPF38A	71	88.235	Tursiops_truncatus
ENSMAMG00000015431	prpf38a	100	81.470	ENSUAMG00000000625	PRPF38A	71	88.235	Ursus_americanus
ENSMAMG00000015431	prpf38a	100	81.470	ENSUMAG00000022674	PRPF38A	71	88.235	Ursus_maritimus
ENSMAMG00000015431	prpf38a	78	87.013	ENSVPAG00000000907	PRPF38A	71	87.783	Vicugna_pacos
ENSMAMG00000015431	prpf38a	100	81.470	ENSVVUG00000004475	PRPF38A	71	88.235	Vulpes_vulpes
ENSMAMG00000015431	prpf38a	100	81.210	ENSXETG00000008060	prpf38a	71	87.330	Xenopus_tropicalis
ENSMAMG00000015431	prpf38a	74	94.170	ENSXCOG00000007393	prpf38a	74	94.170	Xiphophorus_couchianus
ENSMAMG00000015431	prpf38a	100	96.440	ENSXMAG00000026143	prpf38a	100	96.440	Xiphophorus_maculatus