EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000015851 (Gene tree)
Gene ID: 113139528
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 7331 bases
Position: chrOOHQ01000039.1:12792353-12799683
Accession: 113139528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000023590	Glu-tRNAGln	PF02686.15	1.4e-08	1	1
ENSMAMP00000023578	Glu-tRNAGln	PF02686.15	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000024184	-	5816	-	ENSMAMP00000023578	188 (aa)	-	-
ENSMAMT00000024198	-	5659	-	ENSMAMP00000023590	182 (aa)	XP_026178623	UPI000E45821C

Gene Model

Click here to download ENSMAMG00000015851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000015851's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000015851	gatc	55	65.000	ENSG00000257218	GATC	100	72.340	Homo_sapiens
ENSMAMG00000015851	gatc	55	63.000	ENSAMEG00000013298	-	74	63.000	Ailuropoda_melanoleuca
ENSMAMG00000015851	gatc	53	81.250	ENSACIG00000016853	gatc	69	81.250	Amphilophus_citrinellus
ENSMAMG00000015851	gatc	68	89.431	ENSAOCG00000014641	gatc	98	89.431	Amphiprion_ocellaris
ENSMAMG00000015851	gatc	100	70.256	ENSAPEG00000023411	gatc	100	70.256	Amphiprion_percula
ENSMAMG00000015851	gatc	52	89.474	ENSATEG00000009237	gatc	81	87.755	Anabas_testudineus
ENSMAMG00000015851	gatc	58	68.807	ENSACAG00000002868	-	81	68.807	Anolis_carolinensis
ENSMAMG00000015851	gatc	55	66.000	ENSANAG00000034389	-	74	66.000	Aotus_nancymaae
ENSMAMG00000015851	gatc	100	69.271	ENSACLG00000026251	gatc	100	69.271	Astatotilapia_calliptera
ENSMAMG00000015851	gatc	73	80.303	ENSAMXG00000004252	gatc	60	79.412	Astyanax_mexicanus
ENSMAMG00000015851	gatc	55	61.000	ENSBTAG00000012791	GATC	74	61.000	Bos_taurus
ENSMAMG00000015851	gatc	73	35.000	WBGene00013433	Y66D12A.7	80	35.000	Caenorhabditis_elegans
ENSMAMG00000015851	gatc	55	66.000	ENSCJAG00000001183	-	55	66.000	Callithrix_jacchus
ENSMAMG00000015851	gatc	55	65.000	ENSCAFG00000010311	-	74	65.000	Canis_familiaris
ENSMAMG00000015851	gatc	55	65.000	ENSCAFG00020020606	-	74	65.000	Canis_lupus_dingo
ENSMAMG00000015851	gatc	58	58.491	ENSCHIG00000019423	-	78	58.491	Capra_hircus
ENSMAMG00000015851	gatc	55	65.000	ENSTSYG00000006845	-	74	65.000	Carlito_syrichta
ENSMAMG00000015851	gatc	55	62.000	ENSCPOG00000026436	-	67	61.165	Cavia_porcellus
ENSMAMG00000015851	gatc	55	66.000	ENSCCAG00000022235	-	74	66.000	Cebus_capucinus
ENSMAMG00000015851	gatc	55	65.000	ENSCATG00000038807	GATC	74	65.000	Cercocebus_atys
ENSMAMG00000015851	gatc	53	64.583	ENSCLAG00000011015	-	60	64.583	Chinchilla_lanigera
ENSMAMG00000015851	gatc	55	66.000	ENSCSAG00000002259	GATC	74	66.000	Chlorocebus_sabaeus
ENSMAMG00000015851	gatc	55	64.000	ENSCHOG00000009235	-	74	64.000	Choloepus_hoffmanni
ENSMAMG00000015851	gatc	71	63.566	ENSCPBG00000011342	-	68	63.566	Chrysemys_picta_bellii
ENSMAMG00000015851	gatc	55	65.000	ENSCANG00000031071	GATC	74	65.000	Colobus_angolensis_palliatus
ENSMAMG00000015851	gatc	69	51.587	ENSCGRG00001005508	-	62	51.587	Cricetulus_griseus_chok1gshd
ENSMAMG00000015851	gatc	74	51.799	ENSCGRG00001019220	-	90	51.799	Cricetulus_griseus_chok1gshd
ENSMAMG00000015851	gatc	69	50.794	ENSCGRG00000019471	GATC	62	50.794	Cricetulus_griseus_crigri
ENSMAMG00000015851	gatc	74	51.799	ENSCGRG00000004184	-	90	51.799	Cricetulus_griseus_crigri
ENSMAMG00000015851	gatc	92	65.318	ENSCSEG00000007798	gatc	87	65.318	Cynoglossus_semilaevis
ENSMAMG00000015851	gatc	88	60.625	ENSCSEG00000016618	-	84	60.625	Cynoglossus_semilaevis
ENSMAMG00000015851	gatc	98	70.745	ENSCVAG00000004364	gatc	99	70.745	Cyprinodon_variegatus
ENSMAMG00000015851	gatc	80	72.603	ENSDARG00000056855	gatc	79	72.603	Danio_rerio
ENSMAMG00000015851	gatc	54	62.626	ENSDNOG00000012593	-	55	62.222	Dasypus_novemcinctus
ENSMAMG00000015851	gatc	90	39.634	FBgn0064115	GatC	98	39.634	Drosophila_melanogaster
ENSMAMG00000015851	gatc	60	53.211	ENSETEG00000002604	-	77	53.211	Echinops_telfairi
ENSMAMG00000015851	gatc	55	47.525	ENSEBUG00000008772	gatc	58	47.525	Eptatretus_burgeri
ENSMAMG00000015851	gatc	55	66.000	ENSECAG00000011118	-	74	66.000	Equus_caballus
ENSMAMG00000015851	gatc	54	59.596	ENSEEUG00000011638	-	73	59.596	Erinaceus_europaeus
ENSMAMG00000015851	gatc	74	68.841	ENSELUG00000012608	gatc	75	76.699	Esox_lucius
ENSMAMG00000015851	gatc	57	61.682	ENSFCAG00000038718	-	79	61.682	Felis_catus
ENSMAMG00000015851	gatc	63	62.281	ENSFALG00000007564	-	75	62.281	Ficedula_albicollis
ENSMAMG00000015851	gatc	58	66.038	ENSFDAG00000018720	-	77	66.038	Fukomys_damarensis
ENSMAMG00000015851	gatc	100	69.634	ENSFHEG00000014992	GATC	98	69.634	Fundulus_heteroclitus
ENSMAMG00000015851	gatc	88	68.750	ENSGMOG00000008742	gatc	99	68.750	Gadus_morhua
ENSMAMG00000015851	gatc	58	59.434	ENSGALG00000007195	-	79	57.658	Gallus_gallus
ENSMAMG00000015851	gatc	71	79.070	ENSGAFG00000012801	gatc	83	78.626	Gambusia_affinis
ENSMAMG00000015851	gatc	100	67.010	ENSGACG00000008973	gatc	100	67.010	Gasterosteus_aculeatus
ENSMAMG00000015851	gatc	71	63.566	ENSGAGG00000016018	-	70	63.566	Gopherus_agassizii
ENSMAMG00000015851	gatc	52	61.224	ENSGGOG00000026821	GATC	76	61.224	Gorilla_gorilla
ENSMAMG00000015851	gatc	100	69.792	ENSHBUG00000006827	gatc	100	69.792	Haplochromis_burtoni
ENSMAMG00000015851	gatc	59	64.486	ENSHGLG00000011394	GATC	78	64.486	Heterocephalus_glaber_female
ENSMAMG00000015851	gatc	59	62.617	ENSHGLG00100018850	-	77	62.617	Heterocephalus_glaber_male
ENSMAMG00000015851	gatc	70	81.250	ENSHCOG00000009209	gatc	100	81.250	Hippocampus_comes
ENSMAMG00000015851	gatc	71	79.845	ENSIPUG00000023072	gatc	60	80.000	Ictalurus_punctatus
ENSMAMG00000015851	gatc	55	64.000	ENSSTOG00000025740	-	65	64.000	Ictidomys_tridecemlineatus
ENSMAMG00000015851	gatc	55	64.423	ENSJJAG00000000369	Gatc	66	64.423	Jaculus_jaculus
ENSMAMG00000015851	gatc	71	78.295	ENSKMAG00000016476	gatc	99	78.295	Kryptolebias_marmoratus
ENSMAMG00000015851	gatc	100	67.033	ENSLBEG00000007603	gatc	100	67.033	Labrus_bergylta
ENSMAMG00000015851	gatc	74	58.824	ENSLACG00000018239	-	70	58.824	Latimeria_chalumnae
ENSMAMG00000015851	gatc	71	73.643	ENSLOCG00000004056	gatc	70	73.643	Lepisosteus_oculatus
ENSMAMG00000015851	gatc	74	52.414	ENSLAFG00000006384	-	95	52.414	Loxodonta_africana
ENSMAMG00000015851	gatc	55	65.000	ENSMFAG00000034197	GATC	74	65.000	Macaca_fascicularis
ENSMAMG00000015851	gatc	55	65.000	ENSMMUG00000046665	GATC	74	65.000	Macaca_mulatta
ENSMAMG00000015851	gatc	55	65.000	ENSMNEG00000034653	GATC	74	65.000	Macaca_nemestrina
ENSMAMG00000015851	gatc	55	66.000	ENSMLEG00000039862	GATC	74	66.000	Mandrillus_leucophaeus
ENSMAMG00000015851	gatc	100	69.271	ENSMZEG00005016072	gatc	100	69.271	Maylandia_zebra
ENSMAMG00000015851	gatc	58	61.321	ENSMGAG00000008733	-	100	61.321	Meleagris_gallopavo
ENSMAMG00000015851	gatc	69	55.556	ENSMAUG00000012756	Gatc	81	55.556	Mesocricetus_auratus
ENSMAMG00000015851	gatc	55	66.000	ENSMICG00000008669	-	74	66.000	Microcebus_murinus
ENSMAMG00000015851	gatc	52	64.211	ENSMOCG00000005051	Gatc	61	64.211	Microtus_ochrogaster
ENSMAMG00000015851	gatc	63	82.456	ENSMMOG00000017695	gatc	95	82.456	Mola_mola
ENSMAMG00000015851	gatc	55	63.000	ENSMODG00000003152	-	76	63.000	Monodelphis_domestica
ENSMAMG00000015851	gatc	52	65.263	MGP_CAROLIEiJ_G0027623	Gatc	61	65.263	Mus_caroli
ENSMAMG00000015851	gatc	52	65.263	ENSMUSG00000029536	Gatc	61	65.263	Mus_musculus
ENSMAMG00000015851	gatc	52	66.316	MGP_PahariEiJ_G0024203	Gatc	61	66.316	Mus_pahari
ENSMAMG00000015851	gatc	52	64.211	MGP_SPRETEiJ_G0028621	Gatc	61	64.211	Mus_spretus
ENSMAMG00000015851	gatc	55	64.000	ENSMPUG00000003183	-	74	64.000	Mustela_putorius_furo
ENSMAMG00000015851	gatc	52	64.211	ENSMLUG00000010341	-	94	64.211	Myotis_lucifugus
ENSMAMG00000015851	gatc	51	65.591	ENSNGAG00000004734	Gatc	61	65.591	Nannospalax_galili
ENSMAMG00000015851	gatc	100	70.312	ENSNBRG00000007810	gatc	100	70.312	Neolamprologus_brichardi
ENSMAMG00000015851	gatc	58	62.857	ENSNLEG00000015651	GATC	77	62.857	Nomascus_leucogenys
ENSMAMG00000015851	gatc	57	61.538	ENSMEUG00000004064	-	83	62.136	Notamacropus_eugenii
ENSMAMG00000015851	gatc	55	65.000	ENSOPRG00000004226	-	74	65.000	Ochotona_princeps
ENSMAMG00000015851	gatc	71	83.206	ENSONIG00000013444	gatc	90	83.206	Oreochromis_niloticus
ENSMAMG00000015851	gatc	55	66.000	ENSOCUG00000009867	-	74	66.000	Oryctolagus_cuniculus
ENSMAMG00000015851	gatc	66	80.165	ENSORLG00000007156	gatc	100	80.165	Oryzias_latipes
ENSMAMG00000015851	gatc	100	64.550	ENSORLG00020014991	gatc	100	64.550	Oryzias_latipes_hni
ENSMAMG00000015851	gatc	100	64.021	ENSORLG00015003450	gatc	100	64.021	Oryzias_latipes_hsok
ENSMAMG00000015851	gatc	77	73.759	ENSOMEG00000002280	gatc	75	73.759	Oryzias_melastigma
ENSMAMG00000015851	gatc	58	62.857	ENSOGAG00000003850	-	96	62.857	Otolemur_garnettii
ENSMAMG00000015851	gatc	65	54.032	ENSOARG00000012338	-	96	54.032	Ovis_aries
ENSMAMG00000015851	gatc	55	64.000	ENSPPAG00000029164	GATC	74	64.000	Pan_paniscus
ENSMAMG00000015851	gatc	57	61.682	ENSPPRG00000000929	-	79	61.682	Panthera_pardus
ENSMAMG00000015851	gatc	57	61.682	ENSPTIG00000009889	-	79	61.682	Panthera_tigris_altaica
ENSMAMG00000015851	gatc	55	64.000	ENSPTRG00000049887	GATC	74	64.000	Pan_troglodytes
ENSMAMG00000015851	gatc	55	64.000	ENSPANG00000033975	GATC	74	64.000	Papio_anubis
ENSMAMG00000015851	gatc	99	57.923	ENSPKIG00000024856	gatc	92	57.923	Paramormyrops_kingsleyae
ENSMAMG00000015851	gatc	63	64.655	ENSPSIG00000011112	-	99	64.655	Pelodiscus_sinensis
ENSMAMG00000015851	gatc	69	80.952	ENSPMGG00000018829	gatc	80	80.952	Periophthalmus_magnuspinnatus
ENSMAMG00000015851	gatc	74	53.846	ENSPEMG00000000665	Gatc	90	53.846	Peromyscus_maniculatus_bairdii
ENSMAMG00000015851	gatc	52	65.263	ENSPCIG00000025999	-	65	64.000	Phascolarctos_cinereus
ENSMAMG00000015851	gatc	87	76.582	ENSPFOG00000011603	gatc	85	76.582	Poecilia_formosa
ENSMAMG00000015851	gatc	87	75.949	ENSPLAG00000002471	gatc	85	75.949	Poecilia_latipinna
ENSMAMG00000015851	gatc	87	75.949	ENSPMEG00000020958	gatc	85	75.949	Poecilia_mexicana
ENSMAMG00000015851	gatc	62	89.286	ENSPREG00000022256	gatc	75	90.090	Poecilia_reticulata
ENSMAMG00000015851	gatc	59	63.551	ENSPPYG00000005030	GATC	78	63.551	Pongo_abelii
ENSMAMG00000015851	gatc	55	65.000	ENSPCAG00000013864	-	74	65.000	Procavia_capensis
ENSMAMG00000015851	gatc	52	61.224	ENSPCOG00000009493	-	76	61.224	Propithecus_coquereli
ENSMAMG00000015851	gatc	53	65.625	ENSPVAG00000002228	-	71	65.625	Pteropus_vampyrus
ENSMAMG00000015851	gatc	100	69.271	ENSPNYG00000016015	gatc	100	69.271	Pundamilia_nyererei
ENSMAMG00000015851	gatc	72	77.099	ENSPNAG00000001239	gatc	59	77.099	Pygocentrus_nattereri
ENSMAMG00000015851	gatc	52	67.368	ENSRNOG00000001161	Gatc	61	67.368	Rattus_norvegicus
ENSMAMG00000015851	gatc	51	64.516	ENSRNOG00000045621	Gatc	61	64.516	Rattus_norvegicus
ENSMAMG00000015851	gatc	55	64.000	ENSRBIG00000033363	GATC	74	64.000	Rhinopithecus_bieti
ENSMAMG00000015851	gatc	55	64.000	ENSRROG00000042802	GATC	74	64.000	Rhinopithecus_roxellana
ENSMAMG00000015851	gatc	55	64.000	ENSSBOG00000033750	-	74	64.000	Saimiri_boliviensis_boliviensis
ENSMAMG00000015851	gatc	55	64.000	ENSSHAG00000005745	-	94	64.000	Sarcophilus_harrisii
ENSMAMG00000015851	gatc	71	70.229	ENSSFOG00015002508	gatc	90	64.085	Scleropages_formosus
ENSMAMG00000015851	gatc	100	76.923	ENSSMAG00000014280	gatc	100	76.923	Scophthalmus_maximus
ENSMAMG00000015851	gatc	100	71.795	ENSSDUG00000012206	gatc	100	71.795	Seriola_dumerili
ENSMAMG00000015851	gatc	100	72.308	ENSSLDG00000025159	gatc	98	72.308	Seriola_lalandi_dorsalis
ENSMAMG00000015851	gatc	65	60.504	ENSSPUG00000015693	-	91	56.693	Sphenodon_punctatus
ENSMAMG00000015851	gatc	100	70.157	ENSSPAG00000011860	gatc	100	70.157	Stegastes_partitus
ENSMAMG00000015851	gatc	52	67.368	ENSSSCG00000032747	-	74	63.725	Sus_scrofa
ENSMAMG00000015851	gatc	59	66.355	ENSTGUG00000009561	-	99	66.355	Taeniopygia_guttata
ENSMAMG00000015851	gatc	77	81.560	ENSTRUG00000021596	gatc	73	80.000	Takifugu_rubripes
ENSMAMG00000015851	gatc	80	77.397	ENSTNIG00000015879	gatc	71	77.397	Tetraodon_nigroviridis
ENSMAMG00000015851	gatc	55	65.000	ENSTTRG00000000144	GATC	74	65.000	Tursiops_truncatus
ENSMAMG00000015851	gatc	55	64.000	ENSUAMG00000015523	-	74	64.000	Ursus_americanus
ENSMAMG00000015851	gatc	55	65.000	ENSVVUG00000021055	-	74	65.000	Vulpes_vulpes
ENSMAMG00000015851	gatc	61	89.189	ENSXCOG00000017087	gatc	81	89.189	Xiphophorus_couchianus
ENSMAMG00000015851	gatc	98	66.304	ENSXMAG00000018267	gatc	99	66.304	Xiphophorus_maculatus