EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000016189 (Gene tree)
Gene ID: 113125064
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 25969 bases
Position: chrOOHQ01000096.1:15218001-15243969
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	Domain number	Total number
ENSMAMP00000024098	AF-4	PF05110.13	1	2
ENSMAMP00000024098	AF-4	PF05110.13	2	2
ENSMAMP00000024114	AF-4	PF05110.13	1	2
ENSMAMP00000024114	AF-4	PF05110.13	2	2
ENSMAMP00000024136	AF-4	PF05110.13	1	2
ENSMAMP00000024136	AF-4	PF05110.13	2	2
ENSMAMP00000024075	AF-4	PF05110.13	1	2
ENSMAMP00000024075	AF-4	PF05110.13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000024751	-	3853	-	ENSMAMP00000024136	1205 (aa)	-	-
ENSMAMT00000024691	-	3924	-	ENSMAMP00000024075	1251 (aa)	-	-
ENSMAMT00000024713	-	3687	-	ENSMAMP00000024098	1172 (aa)	-	-
ENSMAMT00000024729	-	3783	-	ENSMAMP00000024114	1204 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000016189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000016189's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000016189	-	60	40.164	ENSG00000172493	AFF1	98	40.046	Homo_sapiens
ENSMAMG00000016189	-	99	64.917	ENSAPOG00000002994	-	100	65.170	Acanthochromis_polyacanthus
ENSMAMG00000016189	-	60	38.603	ENSAMEG00000003337	AFF1	99	32.243	Ailuropoda_melanoleuca
ENSMAMG00000016189	-	77	68.407	ENSACIG00000021066	-	86	76.543	Amphilophus_citrinellus
ENSMAMG00000016189	-	54	55.932	ENSACIG00000022732	aff2	67	55.932	Amphilophus_citrinellus
ENSMAMG00000016189	-	99	67.138	ENSAOCG00000020283	-	100	66.972	Amphiprion_ocellaris
ENSMAMG00000016189	-	99	67.138	ENSAPEG00000018794	-	100	66.972	Amphiprion_percula
ENSMAMG00000016189	-	100	69.844	ENSATEG00000015552	-	100	69.433	Anabas_testudineus
ENSMAMG00000016189	-	70	37.416	ENSAPLG00000004059	AFF1	71	37.983	Anas_platyrhynchos
ENSMAMG00000016189	-	98	60.959	ENSACLG00000002905	-	99	60.154	Astatotilapia_calliptera
ENSMAMG00000016189	-	72	38.312	ENSBTAG00000018488	AFF1	72	39.400	Bos_taurus
ENSMAMG00000016189	-	53	47.727	ENSBTAG00000012449	AFF3	53	51.562	Bos_taurus
ENSMAMG00000016189	-	64	37.168	ENSCJAG00000006047	AFF1	72	37.528	Callithrix_jacchus
ENSMAMG00000016189	-	54	53.968	ENSCAFG00000023079	AFF3	52	53.968	Canis_familiaris
ENSMAMG00000016189	-	71	38.126	ENSCAFG00000009476	AFF1	72	40.319	Canis_familiaris
ENSMAMG00000016189	-	69	37.736	ENSCAFG00020008224	AFF1	99	33.522	Canis_lupus_dingo
ENSMAMG00000016189	-	58	41.577	ENSCHIG00000008450	AFF1	92	40.807	Capra_hircus
ENSMAMG00000016189	-	61	37.153	ENSCCAG00000027623	AFF1	98	39.675	Cebus_capucinus
ENSMAMG00000016189	-	72	41.324	ENSCATG00000039501	AFF1	72	41.629	Cercocebus_atys
ENSMAMG00000016189	-	53	47.015	ENSCATG00000045196	AFF3	53	47.015	Cercocebus_atys
ENSMAMG00000016189	-	54	53.968	ENSCLAG00000017100	AFF3	65	53.968	Chinchilla_lanigera
ENSMAMG00000016189	-	60	39.337	ENSCSAG00000004333	AFF1	72	41.839	Chlorocebus_sabaeus
ENSMAMG00000016189	-	95	37.104	ENSCPBG00000005382	AFF1	93	38.009	Chrysemys_picta_bellii
ENSMAMG00000016189	-	55	40.416	ENSCANG00000037514	AFF1	71	40.724	Colobus_angolensis_palliatus
ENSMAMG00000016189	-	53	47.368	ENSCGRG00001014566	Aff3	53	50.000	Cricetulus_griseus_chok1gshd
ENSMAMG00000016189	-	53	47.368	ENSCGRG00000003408	Aff3	60	50.820	Cricetulus_griseus_crigri
ENSMAMG00000016189	-	97	50.563	ENSCVAG00000015626	-	99	51.079	Cyprinodon_variegatus
ENSMAMG00000016189	-	55	40.590	ENSDARG00000052242	aff2	68	34.913	Danio_rerio
ENSMAMG00000016189	-	74	37.389	ENSDORG00000013881	Aff1	72	37.757	Dipodomys_ordii
ENSMAMG00000016189	-	65	37.662	ENSETEG00000014905	AFF1	71	34.382	Echinops_telfairi
ENSMAMG00000016189	-	75	37.577	ENSEASG00005012760	AFF1	71	40.440	Equus_asinus_asinus
ENSMAMG00000016189	-	75	37.551	ENSECAG00000003619	AFF1	71	40.440	Equus_caballus
ENSMAMG00000016189	-	71	74.359	ENSELUG00000019953	-	94	74.359	Esox_lucius
ENSMAMG00000016189	-	53	45.865	ENSFCAG00000029975	AFF3	52	45.865	Felis_catus
ENSMAMG00000016189	-	91	30.303	ENSFCAG00000029806	AFF1	99	31.534	Felis_catus
ENSMAMG00000016189	-	53	48.413	ENSFALG00000008916	AFF4	56	50.000	Ficedula_albicollis
ENSMAMG00000016189	-	56	41.343	ENSFALG00000005554	AFF1	99	32.174	Ficedula_albicollis
ENSMAMG00000016189	-	54	36.400	ENSFDAG00000018846	AFF1	81	32.578	Fukomys_damarensis
ENSMAMG00000016189	-	77	47.071	ENSFHEG00000003521	-	100	47.176	Fundulus_heteroclitus
ENSMAMG00000016189	-	54	54.688	ENSGALG00000016767	AFF3	52	54.688	Gallus_gallus
ENSMAMG00000016189	-	75	32.618	ENSGALG00000043935	AFF1	89	32.868	Gallus_gallus
ENSMAMG00000016189	-	54	51.613	ENSGALG00000009168	AFF2	65	33.130	Gallus_gallus
ENSMAMG00000016189	-	99	56.809	ENSGACG00000016333	-	100	64.171	Gasterosteus_aculeatus
ENSMAMG00000016189	-	75	39.388	ENSGGOG00000008497	AFF1	72	40.781	Gorilla_gorilla
ENSMAMG00000016189	-	98	60.997	ENSHBUG00000005828	-	99	60.068	Haplochromis_burtoni
ENSMAMG00000016189	-	99	49.377	ENSHCOG00000000539	-	99	49.658	Hippocampus_comes
ENSMAMG00000016189	-	50	36.688	ENSIPUG00000015259	-	96	38.322	Ictalurus_punctatus
ENSMAMG00000016189	-	75	37.603	ENSSTOG00000006530	AFF1	72	38.546	Ictidomys_tridecemlineatus
ENSMAMG00000016189	-	56	40.942	ENSSTOG00000004799	AFF2	50	38.214	Ictidomys_tridecemlineatus
ENSMAMG00000016189	-	54	53.125	ENSSTOG00000012140	AFF3	56	54.098	Ictidomys_tridecemlineatus
ENSMAMG00000016189	-	53	46.617	ENSJJAG00000013155	Aff3	60	54.098	Jaculus_jaculus
ENSMAMG00000016189	-	99	57.119	ENSKMAG00000013113	-	91	81.579	Kryptolebias_marmoratus
ENSMAMG00000016189	-	51	36.517	ENSKMAG00000010443	aff4	71	34.416	Kryptolebias_marmoratus
ENSMAMG00000016189	-	99	63.891	ENSLBEG00000016928	-	100	63.644	Labrus_bergylta
ENSMAMG00000016189	-	50	44.286	ENSLACG00000008849	AFF4	71	36.786	Latimeria_chalumnae
ENSMAMG00000016189	-	87	38.347	ENSLOCG00000004025	AFF1	94	38.278	Lepisosteus_oculatus
ENSMAMG00000016189	-	53	46.617	ENSLAFG00000012884	AFF3	52	46.617	Loxodonta_africana
ENSMAMG00000016189	-	57	41.324	ENSMFAG00000037700	AFF1	72	41.629	Macaca_fascicularis
ENSMAMG00000016189	-	54	54.688	ENSMFAG00000031640	AFF3	53	54.688	Macaca_fascicularis
ENSMAMG00000016189	-	57	41.324	ENSMMUG00000014076	AFF1	95	35.484	Macaca_mulatta
ENSMAMG00000016189	-	57	41.324	ENSMNEG00000031536	AFF1	72	41.458	Macaca_nemestrina
ENSMAMG00000016189	-	60	38.628	ENSMLEG00000039099	AFF1	72	41.458	Mandrillus_leucophaeus
ENSMAMG00000016189	-	98	60.873	ENSMZEG00005020442	-	99	60.068	Maylandia_zebra
ENSMAMG00000016189	-	98	31.525	ENSMGAG00000007646	AFF1	99	32.490	Meleagris_gallopavo
ENSMAMG00000016189	-	75	37.204	ENSMAUG00000010241	Aff1	74	37.732	Mesocricetus_auratus
ENSMAMG00000016189	-	53	46.617	ENSMICG00000016001	AFF3	53	46.617	Microcebus_murinus
ENSMAMG00000016189	-	54	38.961	ENSMOCG00000017389	Aff1	69	39.487	Microtus_ochrogaster
ENSMAMG00000016189	-	77	35.857	ENSMODG00000020745	AFF1	68	38.498	Monodelphis_domestica
ENSMAMG00000016189	-	50	44.295	ENSMODG00000013842	AFF4	70	36.059	Monodelphis_domestica
ENSMAMG00000016189	-	100	70.074	ENSMALG00000002436	-	100	70.074	Monopterus_albus
ENSMAMG00000016189	-	75	36.659	MGP_CAROLIEiJ_G0027469	Aff1	69	39.183	Mus_caroli
ENSMAMG00000016189	-	54	53.125	MGP_CAROLIEiJ_G0014063	Aff3	53	53.125	Mus_caroli
ENSMAMG00000016189	-	54	53.125	ENSMUSG00000037138	Aff3	53	53.125	Mus_musculus
ENSMAMG00000016189	-	60	41.429	ENSMUSG00000029313	Aff1	70	39.070	Mus_musculus
ENSMAMG00000016189	-	56	41.071	MGP_PahariEiJ_G0017247	Aff1	69	38.626	Mus_pahari
ENSMAMG00000016189	-	54	53.125	MGP_PahariEiJ_G0027310	Aff3	53	53.125	Mus_pahari
ENSMAMG00000016189	-	54	53.125	MGP_SPRETEiJ_G0014867	Aff3	53	53.125	Mus_spretus
ENSMAMG00000016189	-	60	41.429	MGP_SPRETEiJ_G0028466	Aff1	70	39.394	Mus_spretus
ENSMAMG00000016189	-	72	37.076	ENSMPUG00000002270	AFF1	71	39.150	Mustela_putorius_furo
ENSMAMG00000016189	-	53	48.120	ENSNGAG00000002408	Aff3	51	55.738	Nannospalax_galili
ENSMAMG00000016189	-	60	38.545	ENSNLEG00000009429	AFF1	71	37.528	Nomascus_leucogenys
ENSMAMG00000016189	-	50	46.269	ENSNLEG00000014317	AFF3	51	46.269	Nomascus_leucogenys
ENSMAMG00000016189	-	52	37.455	ENSMEUG00000014599	AFF2	63	33.245	Notamacropus_eugenii
ENSMAMG00000016189	-	98	58.149	ENSONIG00000007636	-	99	57.364	Oreochromis_niloticus
ENSMAMG00000016189	-	54	53.968	ENSOCUG00000009532	AFF3	52	53.968	Oryctolagus_cuniculus
ENSMAMG00000016189	-	55	34.498	ENSORLG00000001361	aff4	61	35.421	Oryzias_latipes
ENSMAMG00000016189	-	69	63.636	ENSORLG00000006428	-	99	63.636	Oryzias_latipes
ENSMAMG00000016189	-	55	34.716	ENSORLG00020020601	aff4	61	35.637	Oryzias_latipes_hni
ENSMAMG00000016189	-	83	63.636	ENSORLG00020003991	-	99	63.636	Oryzias_latipes_hni
ENSMAMG00000016189	-	83	63.636	ENSORLG00015009287	-	99	63.636	Oryzias_latipes_hsok
ENSMAMG00000016189	-	55	35.256	ENSORLG00015004684	aff4	60	36.364	Oryzias_latipes_hsok
ENSMAMG00000016189	-	82	67.442	ENSOMEG00000005799	-	99	67.442	Oryzias_melastigma
ENSMAMG00000016189	-	55	35.590	ENSOMEG00000005078	aff4	81	35.498	Oryzias_melastigma
ENSMAMG00000016189	-	75	39.228	ENSPPAG00000029196	AFF1	72	41.364	Pan_paniscus
ENSMAMG00000016189	-	72	37.143	ENSPPRG00000023590	AFF1	99	31.665	Panthera_pardus
ENSMAMG00000016189	-	72	38.657	ENSPTIG00000011838	AFF1	86	39.817	Panthera_tigris_altaica
ENSMAMG00000016189	-	75	39.228	ENSPTRG00000016255	AFF1	66	53.642	Pan_troglodytes
ENSMAMG00000016189	-	53	47.015	ENSPANG00000018693	AFF3	53	47.015	Papio_anubis
ENSMAMG00000016189	-	55	39.269	ENSPANG00000016722	AFF1	71	39.593	Papio_anubis
ENSMAMG00000016189	-	54	49.153	ENSPKIG00000024249	AFF4	66	43.609	Paramormyrops_kingsleyae
ENSMAMG00000016189	-	90	56.146	ENSPKIG00000007777	-	99	38.226	Paramormyrops_kingsleyae
ENSMAMG00000016189	-	56	44.295	ENSPKIG00000024325	AFF4	58	44.295	Paramormyrops_kingsleyae
ENSMAMG00000016189	-	51	40.984	ENSPSIG00000013003	AFF4	71	37.313	Pelodiscus_sinensis
ENSMAMG00000016189	-	70	39.651	ENSPSIG00000003759	AFF1	70	40.640	Pelodiscus_sinensis
ENSMAMG00000016189	-	50	44.516	ENSPSIG00000006520	-	52	45.806	Pelodiscus_sinensis
ENSMAMG00000016189	-	52	44.262	ENSPEMG00000000785	Aff1	70	39.443	Peromyscus_maniculatus_bairdii
ENSMAMG00000016189	-	62	41.818	ENSPCIG00000011395	AFF1	56	53.030	Phascolarctos_cinereus
ENSMAMG00000016189	-	50	44.295	ENSPCIG00000000197	AFF4	70	36.059	Phascolarctos_cinereus
ENSMAMG00000016189	-	55	37.634	ENSPCIG00000030054	AFF2	53	36.559	Phascolarctos_cinereus
ENSMAMG00000016189	-	99	52.688	ENSPFOG00000004581	-	99	51.986	Poecilia_formosa
ENSMAMG00000016189	-	93	52.339	ENSPLAG00000012910	-	100	50.975	Poecilia_latipinna
ENSMAMG00000016189	-	64	50.319	ENSPMEG00000020100	-	94	48.469	Poecilia_mexicana
ENSMAMG00000016189	-	99	52.601	ENSPREG00000003514	-	99	52.436	Poecilia_reticulata
ENSMAMG00000016189	-	60	40.215	ENSPPYG00000014910	AFF1	71	41.096	Pongo_abelii
ENSMAMG00000016189	-	53	45.865	ENSPCOG00000016986	AFF3	53	45.865	Propithecus_coquereli
ENSMAMG00000016189	-	51	39.592	ENSPCOG00000027339	AFF1	67	37.260	Propithecus_coquereli
ENSMAMG00000016189	-	53	44.304	ENSPVAG00000006595	AFF3	52	44.304	Pteropus_vampyrus
ENSMAMG00000016189	-	54	52.381	ENSRNOG00000018830	Aff3	53	52.381	Rattus_norvegicus
ENSMAMG00000016189	-	57	42.857	ENSRNOG00000002232	Aff1	70	36.830	Rattus_norvegicus
ENSMAMG00000016189	-	53	47.015	ENSRBIG00000029993	AFF3	53	47.015	Rhinopithecus_bieti
ENSMAMG00000016189	-	57	40.553	ENSRBIG00000032242	AFF1	72	40.625	Rhinopithecus_bieti
ENSMAMG00000016189	-	55	40.553	ENSRROG00000045716	AFF1	71	40.625	Rhinopithecus_roxellana
ENSMAMG00000016189	-	53	47.015	ENSRROG00000033773	AFF3	53	47.015	Rhinopithecus_roxellana
ENSMAMG00000016189	-	75	37.805	ENSSBOG00000035401	AFF1	73	41.247	Saimiri_boliviensis_boliviensis
ENSMAMG00000016189	-	50	44.295	ENSSHAG00000013198	AFF4	70	36.111	Sarcophilus_harrisii
ENSMAMG00000016189	-	76	33.262	ENSSHAG00000004203	AFF1	71	35.874	Sarcophilus_harrisii
ENSMAMG00000016189	-	56	43.836	ENSSFOG00015018646	aff4	68	41.718	Scleropages_formosus
ENSMAMG00000016189	-	98	36.785	ENSSFOG00015021743	-	99	37.449	Scleropages_formosus
ENSMAMG00000016189	-	98	66.086	ENSSMAG00000007062	-	98	65.837	Scophthalmus_maximus
ENSMAMG00000016189	-	59	69.209	ENSSDUG00000023775	-	97	68.516	Seriola_dumerili
ENSMAMG00000016189	-	100	71.893	ENSSLDG00000006836	-	100	71.487	Seriola_lalandi_dorsalis
ENSMAMG00000016189	-	60	31.731	ENSSPUG00000001574	AFF1	57	33.104	Sphenodon_punctatus
ENSMAMG00000016189	-	51	31.546	ENSSPAG00000010160	-	61	31.613	Stegastes_partitus
ENSMAMG00000016189	-	97	67.969	ENSSPAG00000003972	-	98	67.233	Stegastes_partitus
ENSMAMG00000016189	-	69	35.252	ENSTGUG00000002726	AFF1	99	32.520	Taeniopygia_guttata
ENSMAMG00000016189	-	70	35.897	ENSTGUG00000000187	AFF4	70	36.920	Taeniopygia_guttata
ENSMAMG00000016189	-	99	54.531	ENSTRUG00000014005	-	99	54.857	Takifugu_rubripes
ENSMAMG00000016189	-	98	47.068	ENSTNIG00000007537	-	99	47.306	Tetraodon_nigroviridis
ENSMAMG00000016189	-	61	41.727	ENSTBEG00000007536	AFF1	71	37.788	Tupaia_belangeri
ENSMAMG00000016189	-	53	46.212	ENSTTRG00000014061	AFF3	53	46.212	Tursiops_truncatus
ENSMAMG00000016189	-	77	35.405	ENSTTRG00000005595	AFF1	80	38.649	Tursiops_truncatus
ENSMAMG00000016189	-	58	38.603	ENSUMAG00000025433	AFF1	78	35.208	Ursus_maritimus
ENSMAMG00000016189	-	54	54.688	ENSVVUG00000028696	AFF3	53	54.688	Vulpes_vulpes
ENSMAMG00000016189	-	72	38.445	ENSVVUG00000009263	AFF1	99	33.543	Vulpes_vulpes
ENSMAMG00000016189	-	55	39.502	ENSXETG00000019630	aff2	51	39.427	Xenopus_tropicalis
ENSMAMG00000016189	-	99	52.570	ENSXMAG00000004657	-	99	52.775	Xiphophorus_maculatus