EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAMG00000016207 (Gene tree)
Gene ID
113135712
Gene Symbol
-
Alias
RAB5CL|RABL
Full Name
ras-related protein Rab-5C-like
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Minus strand
Length
8109 bases
Position
chrOOHQ01000019.1:12475518-12483626
Accession
113135712
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000024099MMR_HSR1PF01926.230.0001311
ENSMAMP00000024117MMR_HSR1PF01926.230.0001311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000024714-1957-ENSMAMP00000024099220 (aa)XP_026171720UPI000E45B88A
ENSMAMT00000024732-5463-ENSMAMP00000024117220 (aa)XP_026171720UPI000E45B88A
Gene Model
Click here to download ENSMAMG00000016207's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000016207's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAMG00000016207-7636.628ENSMAMG00000006862rab128036.788
ENSMAMG00000016207-8943.590ENSMAMG00000018306-9643.590
ENSMAMG00000016207-8042.286ENSMAMG00000020859rab418442.286
ENSMAMG00000016207-7446.626ENSMAMG00000006378rab11bb7546.626
ENSMAMG00000016207-7530.303ENSMAMG00000001748rhebl18930.303
ENSMAMG00000016207-7642.262ENSMAMG00000011549rab2a7942.262
ENSMAMG00000016207-8943.500ENSMAMG00000012471rab25a9343.500
ENSMAMG00000016207-8837.500ENSMAMG00000020246-9637.500
ENSMAMG00000016207-7536.145ENSMAMG00000011131-7836.145
ENSMAMG00000016207-7147.771ENSMAMG00000010278rab11al7347.771
ENSMAMG00000016207-8934.826ENSMAMG00000019230si:dkey-16l2.169634.826
ENSMAMG00000016207-7537.427ENSMAMG00000017431zgc:1015597337.427
ENSMAMG00000016207-8235.644ENSMAMG00000001098rab33ba8435.644
ENSMAMG00000016207-7334.375ENSMAMG00000015456rab237436.842
ENSMAMG00000016207-7131.875ENSMAMG00000018672rab34a6131.875
ENSMAMG00000016207-7445.399ENSMAMG00000018533-7545.399
ENSMAMG00000016207-7235.220ENSMAMG00000008168rabl27035.220
ENSMAMG00000016207-8940.000ENSMAMG00000010297rab25b9240.000
ENSMAMG00000016207-8031.492ENSMAMG00000004359hrasb9431.844
ENSMAMG00000016207-7236.810ENSMAMG00000021095si:dkey-13a21.47936.810
ENSMAMG00000016207-8832.836ENSMAMG00000009927rab9b9732.836
ENSMAMG00000016207-7337.349ENSMAMG00000000565rab33a7137.349
ENSMAMG00000016207-5430.328ENSMAMG00000013640arl8a6430.328
ENSMAMG00000016207-8837.113ENSMAMG00000014602rab139537.113
ENSMAMG00000016207-5033.036ENSMAMG00000012997RAP2B9334.400
ENSMAMG00000016207-8139.106ENSMAMG00000020286-8639.106
ENSMAMG00000016207-7843.275ENSMAMG00000020135zgc:1719278043.275
ENSMAMG00000016207-7334.132ENSMAMG00000006963RAB298134.132
ENSMAMG00000016207-9990.868ENSMAMG00000022322rab5c9990.868
ENSMAMG00000016207-7831.214ENSMAMG00000006281rheb9231.214
ENSMAMG00000016207-8641.799ENSMAMG00000018450-8741.799
ENSMAMG00000016207-8641.270ENSMAMG00000012750rab148741.270
ENSMAMG00000016207-7445.399ENSMAMG00000018556rab11ba7545.399
ENSMAMG00000016207-9042.000ENSMAMG00000014320rab18a9642.000
ENSMAMG00000016207-7534.682ENSMAMG00000013538rab9a8434.682
ENSMAMG00000016207-5430.328ENSMAMG00000016958arl8ba6730.328
ENSMAMG00000016207-7640.698ENSMAMG00000023962RAB7A8340.698
ENSMAMG00000016207-7435.976ENSMAMG00000002296rab42a7535.976
ENSMAMG00000016207-9982.949ENSMAMG00000012573rab5aa9982.949
ENSMAMG00000016207-7537.349ENSMAMG00000021329RAB39B7837.349
ENSMAMG00000016207-8833.010ENSMAMG00000010136rab367633.010
ENSMAMG00000016207-7339.752ENSMAMG00000002795rab157639.752
ENSMAMG00000016207-8949.490ENSMAMG00000006024rab22a9849.490
ENSMAMG00000016207-6633.784ENSMAMG00000001320si:cabz01085950.16133.784
ENSMAMG00000016207-7744.118ENSMAMG00000012488rab6a8244.118
ENSMAMG00000016207-7038.562ENSMAMG00000006886RAB157238.562
ENSMAMG00000016207-7842.442ENSMAMG00000012233rab6bb8342.442
ENSMAMG00000016207-7843.605ENSMAMG00000009672rab6ba8343.605
ENSMAMG00000016207-8941.837ENSMAMG00000001408rab1ba9841.837
ENSMAMG00000016207-7446.626ENSMAMG00000017327rab11a7646.626
ENSMAMG00000016207-8833.000ENSMAMG00000020214rab34b8033.000
ENSMAMG00000016207-7943.407ENSMAMG00000011973rab309043.407
ENSMAMG00000016207-9042.500ENSMAMG00000018445rab18b9642.500
ENSMAMG00000016207-7531.928ENSMAMG00000005606kras8831.548
ENSMAMG00000016207-5530.645ENSMAMG00000023379arl8bb6330.645
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000016207-9988.018ENSG00000108774RAB5C10094.400Homo_sapiens
ENSMAMG00000016207-9991.324ENSAPOG00000016864rab5c9991.324Acanthochromis_polyacanthus
ENSMAMG00000016207-9988.479ENSAMEG00000006003RAB5C9988.479Ailuropoda_melanoleuca
ENSMAMG00000016207-10090.909ENSACIG00000010896rab5c9990.909Amphilophus_citrinellus
ENSMAMG00000016207-9991.324ENSAOCG00000016614rab5c9991.324Amphiprion_ocellaris
ENSMAMG00000016207-9890.741ENSAPEG00000017868-9990.741Amphiprion_percula
ENSMAMG00000016207-9992.202ENSATEG00000001937rab5c9992.202Anabas_testudineus
ENSMAMG00000016207-9489.806ENSANAG00000025390RAB5C10089.806Aotus_nancymaae
ENSMAMG00000016207-9691.981ENSACLG00000008615-10091.441Astatotilapia_calliptera
ENSMAMG00000016207-10090.455ENSACLG00000002706rab5c9990.455Astatotilapia_calliptera
ENSMAMG00000016207-9993.182ENSAMXG00000043717rab5c9993.182Astyanax_mexicanus
ENSMAMG00000016207-9588.942ENSAMXG00000037267-9988.942Astyanax_mexicanus
ENSMAMG00000016207-9988.018ENSBTAG00000006982RAB5C9988.018Bos_taurus
ENSMAMG00000016207-9975.115WBGene00004268rab-59975.115Caenorhabditis_elegans
ENSMAMG00000016207-9988.479ENSCAFG00000015629RAB5C9988.479Canis_familiaris
ENSMAMG00000016207-9988.479ENSCAFG00020013537RAB5C9988.479Canis_lupus_dingo
ENSMAMG00000016207-9988.018ENSCHIG00000012960RAB5C9988.018Capra_hircus
ENSMAMG00000016207-9988.479ENSTSYG00000030531RAB5C9988.479Carlito_syrichta
ENSMAMG00000016207-9988.018ENSCCAG00000025940RAB5C9988.018Cebus_capucinus
ENSMAMG00000016207-9988.018ENSCATG00000040873RAB5C9988.018Cercocebus_atys
ENSMAMG00000016207-9987.558ENSCLAG00000016650RAB5C9987.558Chinchilla_lanigera
ENSMAMG00000016207-8192.737ENSCHOG00000009886RAB5C10092.737Choloepus_hoffmanni
ENSMAMG00000016207-10074.208ENSCING00000003340-10074.208Ciona_intestinalis
ENSMAMG00000016207-9973.684ENSCSAVG00000000613-9980.368Ciona_savignyi
ENSMAMG00000016207-9988.018ENSCGRG00001014226Rab5c9988.018Cricetulus_griseus_chok1gshd
ENSMAMG00000016207-9988.018ENSCGRG00000007534Rab5c9988.018Cricetulus_griseus_crigri
ENSMAMG00000016207-9990.868ENSCSEG00000017024rab5c9990.868Cynoglossus_semilaevis
ENSMAMG00000016207-9991.781ENSCVAG00000009550rab5c9991.781Cyprinodon_variegatus
ENSMAMG00000016207-9988.018ENSDNOG00000038853RAB5C9988.018Dasypus_novemcinctus
ENSMAMG00000016207-9988.940ENSDORG00000006819Rab5c9988.940Dipodomys_ordii
ENSMAMG00000016207-9672.770FBgn0014010Rab59472.770Drosophila_melanogaster
ENSMAMG00000016207-8386.813ENSEBUG00000014794rab5c8686.813Eptatretus_burgeri
ENSMAMG00000016207-9988.479ENSEASG00005009281RAB5C9988.479Equus_asinus_asinus
ENSMAMG00000016207-9988.479ENSECAG00000025054RAB5C9988.479Equus_caballus
ENSMAMG00000016207-9988.018ENSEEUG00000002790RAB5C9988.018Erinaceus_europaeus
ENSMAMG00000016207-9990.783ENSELUG00000018516rab5c9990.783Esox_lucius
ENSMAMG00000016207-10088.182ENSELUG00000010439-9988.182Esox_lucius
ENSMAMG00000016207-9988.018ENSFCAG00000002148RAB5C9988.018Felis_catus
ENSMAMG00000016207-9986.175ENSFDAG00000021541RAB5C9986.175Fukomys_damarensis
ENSMAMG00000016207-10093.182ENSFHEG00000015268-10093.182Fundulus_heteroclitus
ENSMAMG00000016207-9991.781ENSFHEG00000012117rab5c9991.781Fundulus_heteroclitus
ENSMAMG00000016207-9990.411ENSGMOG00000015096rab5c9990.411Gadus_morhua
ENSMAMG00000016207-7986.127ENSGMOG00000001876-9986.127Gadus_morhua
ENSMAMG00000016207-9593.301ENSGAFG00000003642-10090.135Gambusia_affinis
ENSMAMG00000016207-9990.868ENSGAFG00000000884rab5c9990.868Gambusia_affinis
ENSMAMG00000016207-9987.156ENSGACG00000008659rab5c9987.156Gasterosteus_aculeatus
ENSMAMG00000016207-9988.018ENSGGOG00000005472RAB5C9988.018Gorilla_gorilla
ENSMAMG00000016207-9691.981ENSHBUG00000006823-10091.441Haplochromis_burtoni
ENSMAMG00000016207-10090.455ENSHBUG00000002014rab5c9990.455Haplochromis_burtoni
ENSMAMG00000016207-9987.097ENSHGLG00000012067RAB5C9987.097Heterocephalus_glaber_female
ENSMAMG00000016207-9585.238ENSHCOG00000020238-9984.932Hippocampus_comes
ENSMAMG00000016207-10092.760ENSHCOG00000004662rab5c9892.760Hippocampus_comes
ENSMAMG00000016207-9490.338ENSIPUG00000020082rab5c9990.498Ictalurus_punctatus
ENSMAMG00000016207-9988.018ENSSTOG00000006620RAB5C9988.018Ictidomys_tridecemlineatus
ENSMAMG00000016207-9988.479ENSJJAG00000021181Rab5c9988.479Jaculus_jaculus
ENSMAMG00000016207-9991.781ENSKMAG00000020038rab5c9991.781Kryptolebias_marmoratus
ENSMAMG00000016207-10094.091ENSKMAG00000017417-10094.091Kryptolebias_marmoratus
ENSMAMG00000016207-9992.237ENSLBEG00000004128rab5c9992.237Labrus_bergylta
ENSMAMG00000016207-10095.000ENSLBEG00000010408-10095.000Labrus_bergylta
ENSMAMG00000016207-9989.862ENSLOCG00000012566rab5c10089.862Lepisosteus_oculatus
ENSMAMG00000016207-9988.018ENSMFAG00000039627RAB5C9988.018Macaca_fascicularis
ENSMAMG00000016207-9988.018ENSMNEG00000000355RAB5C9988.018Macaca_nemestrina
ENSMAMG00000016207-9691.981ENSMZEG00005021090-10091.441Maylandia_zebra
ENSMAMG00000016207-10090.455ENSMZEG00005022735rab5c9990.455Maylandia_zebra
ENSMAMG00000016207-9988.479ENSMAUG00000015005Rab5c9988.479Mesocricetus_auratus
ENSMAMG00000016207-9988.479ENSMICG00000041608RAB5C9988.479Microcebus_murinus
ENSMAMG00000016207-9988.479ENSMOCG00000018531-9988.479Microtus_ochrogaster
ENSMAMG00000016207-9990.826ENSMMOG00000020621rab5c9990.826Mola_mola
ENSMAMG00000016207-9983.636ENSMALG00000006052rab5c9984.375Monopterus_albus
ENSMAMG00000016207-10094.545ENSMALG00000022348-10094.545Monopterus_albus
ENSMAMG00000016207-9988.940MGP_CAROLIEiJ_G0017184Rab5c9988.940Mus_caroli
ENSMAMG00000016207-9988.940ENSMUSG00000019173Rab5c9988.940Mus_musculus
ENSMAMG00000016207-9988.940MGP_PahariEiJ_G0018314Rab5c9988.940Mus_pahari
ENSMAMG00000016207-9988.940MGP_SPRETEiJ_G0018027Rab5c9988.940Mus_spretus
ENSMAMG00000016207-9988.479ENSMPUG00000010554RAB5C9988.479Mustela_putorius_furo
ENSMAMG00000016207-9988.018ENSNGAG00000010286Rab5c9988.018Nannospalax_galili
ENSMAMG00000016207-10090.455ENSNBRG00000018165rab5c9990.455Neolamprologus_brichardi
ENSMAMG00000016207-9691.981ENSNBRG00000016922-10091.441Neolamprologus_brichardi
ENSMAMG00000016207-8186.592ENSOPRG00000008255RAB5C10086.592Ochotona_princeps
ENSMAMG00000016207-9987.097ENSODEG00000017920RAB5C9987.097Octodon_degus
ENSMAMG00000016207-9991.324ENSONIG00000001113rab5c9991.324Oreochromis_niloticus
ENSMAMG00000016207-9990.826ENSORLG00000003882rab5c9990.826Oryzias_latipes
ENSMAMG00000016207-9990.826ENSORLG00020008388rab5c9990.826Oryzias_latipes_hni
ENSMAMG00000016207-9990.826ENSORLG00015021900rab5c9990.826Oryzias_latipes_hsok
ENSMAMG00000016207-9990.826ENSOMEG00000023078rab5c9990.826Oryzias_melastigma
ENSMAMG00000016207-9988.479ENSOGAG00000009456RAB5C9988.479Otolemur_garnettii
ENSMAMG00000016207-9988.018ENSOARG00000018768RAB5C9988.018Ovis_aries
ENSMAMG00000016207-9988.018ENSPPAG00000037206RAB5C9988.018Pan_paniscus
ENSMAMG00000016207-9988.018ENSPPRG00000005745RAB5C9988.018Panthera_pardus
ENSMAMG00000016207-9988.018ENSPTIG00000008177RAB5C9988.018Panthera_tigris_altaica
ENSMAMG00000016207-9988.018ENSPTRG00000009194RAB5C9988.018Pan_troglodytes
ENSMAMG00000016207-9985.714ENSPKIG00000020112-9985.714Paramormyrops_kingsleyae
ENSMAMG00000016207-9986.636ENSPKIG00000001237-9986.636Paramormyrops_kingsleyae
ENSMAMG00000016207-9790.610ENSPMGG00000010792rab5c9890.610Periophthalmus_magnuspinnatus
ENSMAMG00000016207-9988.479ENSPEMG00000017971Rab5c9988.479Peromyscus_maniculatus_bairdii
ENSMAMG00000016207-9974.775ENSPMAG00000000008rab5c9974.775Petromyzon_marinus
ENSMAMG00000016207-9975.688ENSPMAG00000007867rab5c9975.688Petromyzon_marinus
ENSMAMG00000016207-9978.440ENSPMAG00000001399rab5c10078.440Petromyzon_marinus
ENSMAMG00000016207-9988.018ENSPCIG00000020225-9988.018Phascolarctos_cinereus
ENSMAMG00000016207-9991.781ENSPLAG00000016333-10091.781Poecilia_latipinna
ENSMAMG00000016207-9990.868ENSPLAG00000004790rab5c9990.868Poecilia_latipinna
ENSMAMG00000016207-9792.958ENSPMEG00000012614-9991.403Poecilia_mexicana
ENSMAMG00000016207-9990.868ENSPMEG00000011336rab5c9990.868Poecilia_mexicana
ENSMAMG00000016207-9990.868ENSPREG00000010146rab5c9990.868Poecilia_reticulata
ENSMAMG00000016207-8692.593ENSPREG00000022167-8993.989Poecilia_reticulata
ENSMAMG00000016207-9988.018ENSPPYG00000008398RAB5C9988.018Pongo_abelii
ENSMAMG00000016207-9987.097ENSPCAG00000016412RAB5C9987.097Procavia_capensis
ENSMAMG00000016207-9988.018ENSPCOG00000026327RAB5C9988.018Propithecus_coquereli
ENSMAMG00000016207-9988.479ENSPVAG00000003867RAB5C9988.479Pteropus_vampyrus
ENSMAMG00000016207-10090.455ENSPNYG00000010615rab5c9990.455Pundamilia_nyererei
ENSMAMG00000016207-9691.981ENSPNYG00000015851-10091.441Pundamilia_nyererei
ENSMAMG00000016207-9588.038ENSPNAG00000002218-9888.038Pygocentrus_nattereri
ENSMAMG00000016207-9992.273ENSPNAG00000028138rab5c9992.273Pygocentrus_nattereri
ENSMAMG00000016207-9988.479ENSRNOG00000018568Rab5c9988.479Rattus_norvegicus
ENSMAMG00000016207-9988.018ENSRBIG00000031376RAB5C9988.018Rhinopithecus_bieti
ENSMAMG00000016207-9988.018ENSRROG00000032895RAB5C9988.018Rhinopithecus_roxellana
ENSMAMG00000016207-9988.018ENSSBOG00000032552-9988.018Saimiri_boliviensis_boliviensis
ENSMAMG00000016207-9988.479ENSSHAG00000005267-9988.479Sarcophilus_harrisii
ENSMAMG00000016207-9984.793ENSSFOG00015009988-9884.793Scleropages_formosus
ENSMAMG00000016207-9590.952ENSSMAG00000007323rab5c9989.954Scophthalmus_maximus
ENSMAMG00000016207-9990.868ENSSDUG00000023008rab5c9990.868Seriola_dumerili
ENSMAMG00000016207-9989.954ENSSLDG00000017771rab5c9989.954Seriola_lalandi_dorsalis
ENSMAMG00000016207-9988.479ENSSPUG00000012950-9988.479Sphenodon_punctatus
ENSMAMG00000016207-9991.781ENSSPAG00000006436rab5c9991.781Stegastes_partitus
ENSMAMG00000016207-9988.018ENSSSCG00000032467RAB5C9988.018Sus_scrofa
ENSMAMG00000016207-9990.411ENSTRUG00000015590rab5c9990.411Takifugu_rubripes
ENSMAMG00000016207-9989.862ENSTNIG00000011711rab5c9889.862Tetraodon_nigroviridis
ENSMAMG00000016207-9988.018ENSTBEG00000007092RAB5C9988.018Tupaia_belangeri
ENSMAMG00000016207-9987.558ENSTTRG00000006673RAB5C9987.558Tursiops_truncatus
ENSMAMG00000016207-9988.479ENSUAMG00000024343RAB5C9988.479Ursus_americanus
ENSMAMG00000016207-9988.479ENSUMAG00000023270RAB5C9988.479Ursus_maritimus
ENSMAMG00000016207-9594.258ENSXCOG00000006300-10091.031Xiphophorus_couchianus
ENSMAMG00000016207-9991.324ENSXCOG00000016788rab5c9991.324Xiphophorus_couchianus
ENSMAMG00000016207-9990.868ENSXMAG00000003266rab5c9990.868Xiphophorus_maculatus
ENSMAMG00000016207-9992.237ENSXMAG00000022179-10092.237Xiphophorus_maculatus

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