EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000016519 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 3603 bases
Position: chrOOHQ01000107.1:43259661-43263263
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000024588	zf-C2H2	PF00096.26	4.9e-36	1	6
ENSMAMP00000024588	zf-C2H2	PF00096.26	4.9e-36	2	6
ENSMAMP00000024588	zf-C2H2	PF00096.26	4.9e-36	3	6
ENSMAMP00000024588	zf-C2H2	PF00096.26	4.9e-36	4	6
ENSMAMP00000024588	zf-C2H2	PF00096.26	4.9e-36	5	6
ENSMAMP00000024588	zf-C2H2	PF00096.26	4.9e-36	6	6
ENSMAMP00000024588	zf-met	PF12874.7	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000025221	-	1116	-	ENSMAMP00000024588	371 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000016519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000016519's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000016519	-	91	40.556	ENSMAMG00000014743	-	50	40.556
ENSMAMG00000016519	-	86	41.897	ENSMAMG00000014758	-	83	41.897
ENSMAMG00000016519	-	91	40.310	ENSMAMG00000019385	-	69	39.516
ENSMAMG00000016519	-	99	36.129	ENSMAMG00000017939	-	93	36.628
ENSMAMG00000016519	-	89	41.593	ENSMAMG00000000789	-	76	41.593
ENSMAMG00000016519	-	96	48.684	ENSMAMG00000002083	-	96	48.684
ENSMAMG00000016519	-	86	45.283	ENSMAMG00000001808	zbtb47b	68	45.283
ENSMAMG00000016519	-	88	33.516	ENSMAMG00000018743	-	80	33.516
ENSMAMG00000016519	-	97	40.952	ENSMAMG00000022145	-	80	40.952
ENSMAMG00000016519	-	87	39.367	ENSMAMG00000022147	-	68	37.698
ENSMAMG00000016519	-	88	32.667	ENSMAMG00000016634	si:ch211-216l23.1	74	31.298
ENSMAMG00000016519	-	96	40.714	ENSMAMG00000008125	gfi1ab	63	40.714
ENSMAMG00000016519	-	96	37.989	ENSMAMG00000004896	gfi1aa	61	37.989
ENSMAMG00000016519	-	97	51.220	ENSMAMG00000016119	-	84	51.220
ENSMAMG00000016519	-	95	41.176	ENSMAMG00000008000	znf341	54	32.667
ENSMAMG00000016519	-	88	39.053	ENSMAMG00000009817	-	63	43.548
ENSMAMG00000016519	-	97	36.152	ENSMAMG00000015087	znf319b	85	36.257
ENSMAMG00000016519	-	89	43.636	ENSMAMG00000004684	znf526	62	43.636
ENSMAMG00000016519	-	96	46.667	ENSMAMG00000001157	znf236	72	44.144
ENSMAMG00000016519	-	95	38.514	ENSMAMG00000009555	-	51	34.928
ENSMAMG00000016519	-	93	38.710	ENSMAMG00000011698	scrt1b	60	38.710
ENSMAMG00000016519	-	89	42.857	ENSMAMG00000022206	-	79	37.132
ENSMAMG00000016519	-	89	36.686	ENSMAMG00000003540	ZNF384	50	36.686
ENSMAMG00000016519	-	67	39.450	ENSMAMG00000021196	zgc:171929	56	39.450
ENSMAMG00000016519	-	94	37.879	ENSMAMG00000007352	-	97	42.188
ENSMAMG00000016519	-	96	44.397	ENSMAMG00000022502	-	98	45.490
ENSMAMG00000016519	-	96	37.318	ENSMAMG00000009051	-	88	42.276
ENSMAMG00000016519	-	88	45.033	ENSMAMG00000010902	-	60	41.390
ENSMAMG00000016519	-	94	42.784	ENSMAMG00000018114	-	78	44.944
ENSMAMG00000016519	-	86	43.590	ENSMAMG00000016087	-	84	43.590
ENSMAMG00000016519	-	91	40.476	ENSMAMG00000006312	-	92	44.048
ENSMAMG00000016519	-	88	46.667	ENSMAMG00000015434	-	73	46.667
ENSMAMG00000016519	-	87	53.571	ENSMAMG00000017946	-	77	42.020
ENSMAMG00000016519	-	88	38.141	ENSMAMG00000002731	znf1056	85	38.141
ENSMAMG00000016519	-	93	44.697	ENSMAMG00000019301	-	95	44.697
ENSMAMG00000016519	-	94	42.342	ENSMAMG00000022154	-	56	42.342
ENSMAMG00000016519	-	90	41.146	ENSMAMG00000022152	-	53	41.146
ENSMAMG00000016519	-	92	35.789	ENSMAMG00000013419	prdm5	81	35.789
ENSMAMG00000016519	-	89	42.553	ENSMAMG00000016542	-	66	42.553
ENSMAMG00000016519	-	86	37.987	ENSMAMG00000013025	-	51	37.987
ENSMAMG00000016519	-	87	34.328	ENSMAMG00000015632	snai2	53	34.328
ENSMAMG00000016519	-	90	42.119	ENSMAMG00000018137	-	61	40.827
ENSMAMG00000016519	-	96	40.397	ENSMAMG00000003040	gfi1b	55	40.397
ENSMAMG00000016519	-	87	48.780	ENSMAMG00000014734	-	53	47.561
ENSMAMG00000016519	-	96	38.182	ENSMAMG00000017911	ZNF319	92	38.182
ENSMAMG00000016519	-	88	31.293	ENSMAMG00000010384	-	56	31.293
ENSMAMG00000016519	-	89	30.242	ENSMAMG00000023652	patz1	50	32.121
ENSMAMG00000016519	-	89	50.660	ENSMAMG00000016484	-	96	45.480
ENSMAMG00000016519	-	92	37.651	ENSMAMG00000015670	-	67	37.651

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000016519	-	95	41.118	ENSATEG00000010859	-	96	37.826	Anabas_testudineus
ENSMAMG00000016519	-	93	43.974	ENSAMXG00000031794	-	96	48.235	Astyanax_mexicanus
ENSMAMG00000016519	-	94	41.530	ENSAMXG00000042633	-	95	41.530	Astyanax_mexicanus
ENSMAMG00000016519	-	87	44.667	ENSAMXG00000042593	-	91	42.202	Astyanax_mexicanus
ENSMAMG00000016519	-	88	42.194	ENSAMXG00000039700	-	89	46.602	Astyanax_mexicanus
ENSMAMG00000016519	-	89	42.560	ENSAMXG00000039977	-	92	43.382	Astyanax_mexicanus
ENSMAMG00000016519	-	87	42.925	ENSAMXG00000013274	-	100	42.925	Astyanax_mexicanus
ENSMAMG00000016519	-	88	48.235	ENSAMXG00000039432	-	96	43.844	Astyanax_mexicanus
ENSMAMG00000016519	-	94	41.441	ENSAMXG00000029960	-	97	41.441	Astyanax_mexicanus
ENSMAMG00000016519	-	84	46.667	ENSCPBG00000009849	-	83	42.286	Chrysemys_picta_bellii
ENSMAMG00000016519	-	93	44.364	ENSELUG00000009575	-	97	42.657	Esox_lucius
ENSMAMG00000016519	-	91	42.029	ENSIPUG00000015121	-	71	40.514	Ictalurus_punctatus
ENSMAMG00000016519	-	86	43.750	ENSKMAG00000000543	-	95	39.297	Kryptolebias_marmoratus
ENSMAMG00000016519	-	89	41.246	ENSMZEG00005020574	-	80	41.246	Maylandia_zebra
ENSMAMG00000016519	-	86	40.129	ENSONIG00000007088	-	100	40.129	Oreochromis_niloticus
ENSMAMG00000016519	-	84	43.182	ENSPSIG00000000075	-	74	38.944	Pelodiscus_sinensis
ENSMAMG00000016519	-	88	45.638	ENSPNAG00000008480	-	90	43.385	Pygocentrus_nattereri
ENSMAMG00000016519	-	92	44.444	ENSPNAG00000012215	-	88	44.444	Pygocentrus_nattereri
ENSMAMG00000016519	-	98	36.300	ENSSMAG00000007396	-	80	37.845	Scophthalmus_maximus
ENSMAMG00000016519	-	86	43.571	ENSTBEG00000012287	-	99	41.967	Tupaia_belangeri