EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000016536 (Gene tree)
Gene ID: 113139874
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 5739 bases
Position: chrOOHQ01000042.1:13826103-13831841
Accession: 113139874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000024595	RTC	PF01137.21	4.7e-87	1	1
ENSMAMP00000024595	RTC_insert	PF05189.13	3.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000025228	-	3082	-	ENSMAMP00000024595	364 (aa)	XP_026179269	UPI000E4561A3

Gene Model

Click here to download ENSMAMG00000016536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000016536's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000016536	rtca	100	73.224	ENSG00000137996	RTCA	100	73.224	Homo_sapiens
ENSMAMG00000016536	rtca	100	94.231	ENSAPOG00000001345	rtca	99	94.231	Acanthochromis_polyacanthus
ENSMAMG00000016536	rtca	73	75.093	ENSAMEG00000008855	RTCA	100	75.093	Ailuropoda_melanoleuca
ENSMAMG00000016536	rtca	100	93.407	ENSACIG00000019643	rtca	100	93.407	Amphilophus_citrinellus
ENSMAMG00000016536	rtca	100	95.055	ENSAOCG00000014979	rtca	99	95.055	Amphiprion_ocellaris
ENSMAMG00000016536	rtca	100	94.780	ENSAPEG00000006945	rtca	99	94.780	Amphiprion_percula
ENSMAMG00000016536	rtca	96	94.842	ENSATEG00000006315	rtca	96	94.842	Anabas_testudineus
ENSMAMG00000016536	rtca	96	68.839	ENSAPLG00000015430	RTCA	100	68.839	Anas_platyrhynchos
ENSMAMG00000016536	rtca	100	73.224	ENSANAG00000025446	RTCA	100	73.224	Aotus_nancymaae
ENSMAMG00000016536	rtca	100	93.132	ENSACLG00000020770	rtca	99	93.132	Astatotilapia_calliptera
ENSMAMG00000016536	rtca	100	81.319	ENSAMXG00000043271	rtca	100	81.319	Astyanax_mexicanus
ENSMAMG00000016536	rtca	100	73.224	ENSBTAG00000006321	RTCA	100	73.224	Bos_taurus
ENSMAMG00000016536	rtca	100	73.497	ENSCJAG00000003398	RTCA	100	73.497	Callithrix_jacchus
ENSMAMG00000016536	rtca	100	72.951	ENSCAFG00000020010	RTCA	68	72.951	Canis_familiaris
ENSMAMG00000016536	rtca	100	72.951	ENSCAFG00020011528	RTCA	57	72.951	Canis_lupus_dingo
ENSMAMG00000016536	rtca	100	72.951	ENSCHIG00000018937	RTCA	100	72.951	Capra_hircus
ENSMAMG00000016536	rtca	100	71.858	ENSTSYG00000011305	RTCA	100	71.858	Carlito_syrichta
ENSMAMG00000016536	rtca	100	72.951	ENSCCAG00000021844	RTCA	100	72.951	Cebus_capucinus
ENSMAMG00000016536	rtca	100	70.976	ENSCATG00000019364	RTCA	100	73.786	Cercocebus_atys
ENSMAMG00000016536	rtca	87	74.051	ENSCLAG00000006125	RTCA	100	74.051	Chinchilla_lanigera
ENSMAMG00000016536	rtca	100	73.224	ENSCSAG00000001509	RTCA	100	73.224	Chlorocebus_sabaeus
ENSMAMG00000016536	rtca	100	71.585	ENSCHOG00000005211	RTCA	100	71.585	Choloepus_hoffmanni
ENSMAMG00000016536	rtca	100	69.315	ENSCPBG00000026658	RTCA	100	69.315	Chrysemys_picta_bellii
ENSMAMG00000016536	rtca	98	56.546	ENSCING00000007875	-	98	56.546	Ciona_intestinalis
ENSMAMG00000016536	rtca	98	55.710	ENSCSAVG00000007269	-	98	55.710	Ciona_savignyi
ENSMAMG00000016536	rtca	100	72.951	ENSCANG00000040106	RTCA	100	72.951	Colobus_angolensis_palliatus
ENSMAMG00000016536	rtca	73	72.491	ENSCGRG00001013163	Rtca	85	72.491	Cricetulus_griseus_chok1gshd
ENSMAMG00000016536	rtca	98	86.592	ENSCSEG00000000530	rtca	96	86.592	Cynoglossus_semilaevis
ENSMAMG00000016536	rtca	100	74.863	ENSCVAG00000021809	rtca	100	74.863	Cyprinodon_variegatus
ENSMAMG00000016536	rtca	100	81.593	ENSDARG00000002215	rtca	100	81.593	Danio_rerio
ENSMAMG00000016536	rtca	100	73.224	ENSDNOG00000000456	RTCA	100	73.224	Dasypus_novemcinctus
ENSMAMG00000016536	rtca	100	72.404	ENSDORG00000005448	Rtca	100	72.404	Dipodomys_ordii
ENSMAMG00000016536	rtca	98	39.216	FBgn0025630	Rtca	98	39.216	Drosophila_melanogaster
ENSMAMG00000016536	rtca	94	53.488	ENSEBUG00000008556	rtca	95	53.488	Eptatretus_burgeri
ENSMAMG00000016536	rtca	100	72.951	ENSEASG00005015926	RTCA	100	72.951	Equus_asinus_asinus
ENSMAMG00000016536	rtca	100	72.951	ENSECAG00000019831	RTCA	100	72.951	Equus_caballus
ENSMAMG00000016536	rtca	91	65.607	ENSEEUG00000001165	RTCA	100	65.607	Erinaceus_europaeus
ENSMAMG00000016536	rtca	99	78.729	ENSELUG00000003741	rtca	99	78.729	Esox_lucius
ENSMAMG00000016536	rtca	100	73.497	ENSFCAG00000024460	RTCA	100	73.497	Felis_catus
ENSMAMG00000016536	rtca	93	70.118	ENSFALG00000002443	RTCA	91	70.118	Ficedula_albicollis
ENSMAMG00000016536	rtca	100	71.585	ENSFDAG00000012070	-	100	71.585	Fukomys_damarensis
ENSMAMG00000016536	rtca	98	58.011	ENSFDAG00000016084	-	100	58.011	Fukomys_damarensis
ENSMAMG00000016536	rtca	71	77.821	ENSFHEG00000002868	rtca	97	83.556	Fundulus_heteroclitus
ENSMAMG00000016536	rtca	100	79.670	ENSGMOG00000013264	rtca	100	79.670	Gadus_morhua
ENSMAMG00000016536	rtca	100	69.589	ENSGALG00000005277	RTCA	100	69.589	Gallus_gallus
ENSMAMG00000016536	rtca	100	91.484	ENSGAFG00000011853	rtca	99	91.484	Gambusia_affinis
ENSMAMG00000016536	rtca	100	89.286	ENSGACG00000013497	rtca	100	89.286	Gasterosteus_aculeatus
ENSMAMG00000016536	rtca	80	69.625	ENSGAGG00000023306	RTCA	100	69.625	Gopherus_agassizii
ENSMAMG00000016536	rtca	100	72.131	ENSGGOG00000044018	-	100	72.131	Gorilla_gorilla
ENSMAMG00000016536	rtca	100	72.678	ENSGGOG00000009546	-	100	72.816	Gorilla_gorilla
ENSMAMG00000016536	rtca	100	92.857	ENSHBUG00000002114	rtca	99	92.857	Haplochromis_burtoni
ENSMAMG00000016536	rtca	100	71.858	ENSHGLG00000002617	RTCA	100	71.858	Heterocephalus_glaber_female
ENSMAMG00000016536	rtca	100	71.858	ENSHGLG00100006056	RTCA	100	71.858	Heterocephalus_glaber_male
ENSMAMG00000016536	rtca	100	76.923	ENSHCOG00000020628	rtca	89	76.923	Hippocampus_comes
ENSMAMG00000016536	rtca	100	80.769	ENSIPUG00000024803	rtca	100	80.769	Ictalurus_punctatus
ENSMAMG00000016536	rtca	100	67.760	ENSSTOG00000013528	-	100	67.760	Ictidomys_tridecemlineatus
ENSMAMG00000016536	rtca	100	63.661	ENSSTOG00000033099	-	100	63.661	Ictidomys_tridecemlineatus
ENSMAMG00000016536	rtca	100	52.329	ENSJJAG00000016178	Rtca	100	52.329	Jaculus_jaculus
ENSMAMG00000016536	rtca	100	91.209	ENSKMAG00000006651	rtca	99	91.209	Kryptolebias_marmoratus
ENSMAMG00000016536	rtca	99	88.920	ENSLBEG00000028971	rtca	99	88.920	Labrus_bergylta
ENSMAMG00000016536	rtca	88	88.088	ENSLBEG00000002448	-	99	88.088	Labrus_bergylta
ENSMAMG00000016536	rtca	100	68.767	ENSLACG00000013666	RTCA	100	68.767	Latimeria_chalumnae
ENSMAMG00000016536	rtca	100	75.342	ENSLOCG00000000093	rtca	99	75.342	Lepisosteus_oculatus
ENSMAMG00000016536	rtca	100	71.858	ENSLAFG00000001473	RTCA	100	71.858	Loxodonta_africana
ENSMAMG00000016536	rtca	100	73.224	ENSMFAG00000034132	RTCA	100	73.224	Macaca_fascicularis
ENSMAMG00000016536	rtca	100	73.224	ENSMMUG00000019105	RTCA	100	73.224	Macaca_mulatta
ENSMAMG00000016536	rtca	84	73.463	ENSMNEG00000037163	RTCA	100	73.463	Macaca_nemestrina
ENSMAMG00000016536	rtca	100	60.383	ENSMLEG00000042151	RTCA	100	60.383	Mandrillus_leucophaeus
ENSMAMG00000016536	rtca	100	93.132	ENSMZEG00005017945	rtca	99	93.132	Maylandia_zebra
ENSMAMG00000016536	rtca	87	69.811	ENSMGAG00000006892	RTCA	99	69.811	Meleagris_gallopavo
ENSMAMG00000016536	rtca	100	72.131	ENSMAUG00000008488	Rtca	100	72.131	Mesocricetus_auratus
ENSMAMG00000016536	rtca	84	73.786	ENSMICG00000008643	RTCA	100	73.786	Microcebus_murinus
ENSMAMG00000016536	rtca	100	71.585	ENSMOCG00000016660	Rtca	100	71.585	Microtus_ochrogaster
ENSMAMG00000016536	rtca	84	90.879	ENSMMOG00000007750	rtca	100	90.879	Mola_mola
ENSMAMG00000016536	rtca	100	71.585	ENSMODG00000003557	RTCA	100	71.585	Monodelphis_domestica
ENSMAMG00000016536	rtca	100	96.154	ENSMALG00000020844	rtca	100	96.154	Monopterus_albus
ENSMAMG00000016536	rtca	100	70.765	MGP_CAROLIEiJ_G0025565	Rtca	100	71.127	Mus_caroli
ENSMAMG00000016536	rtca	100	70.492	ENSMUSG00000000339	Rtca	100	71.127	Mus_musculus
ENSMAMG00000016536	rtca	100	70.765	MGP_PahariEiJ_G0027011	Rtca	100	71.127	Mus_pahari
ENSMAMG00000016536	rtca	100	71.038	MGP_SPRETEiJ_G0026515	Rtca	100	71.831	Mus_spretus
ENSMAMG00000016536	rtca	100	73.497	ENSMPUG00000012119	RTCA	100	73.497	Mustela_putorius_furo
ENSMAMG00000016536	rtca	100	70.027	ENSMLUG00000009922	RTCA	100	70.027	Myotis_lucifugus
ENSMAMG00000016536	rtca	100	71.311	ENSNGAG00000011540	Rtca	99	71.311	Nannospalax_galili
ENSMAMG00000016536	rtca	100	92.857	ENSNBRG00000003062	rtca	99	92.857	Neolamprologus_brichardi
ENSMAMG00000016536	rtca	100	72.951	ENSNLEG00000031426	RTCA	100	72.951	Nomascus_leucogenys
ENSMAMG00000016536	rtca	73	69.888	ENSOPRG00000012092	RTCA	71	69.888	Ochotona_princeps
ENSMAMG00000016536	rtca	95	72.701	ENSODEG00000006990	RTCA	96	72.934	Octodon_degus
ENSMAMG00000016536	rtca	100	93.132	ENSONIG00000007753	rtca	99	93.132	Oreochromis_niloticus
ENSMAMG00000016536	rtca	87	73.817	ENSOANG00000012055	RTCA	98	73.817	Ornithorhynchus_anatinus
ENSMAMG00000016536	rtca	100	72.951	ENSOCUG00000014247	RTCA	100	72.951	Oryctolagus_cuniculus
ENSMAMG00000016536	rtca	100	89.835	ENSORLG00000013605	rtca	100	89.835	Oryzias_latipes
ENSMAMG00000016536	rtca	100	90.110	ENSORLG00020001904	rtca	100	90.110	Oryzias_latipes_hni
ENSMAMG00000016536	rtca	100	89.835	ENSORLG00015021064	rtca	100	89.835	Oryzias_latipes_hsok
ENSMAMG00000016536	rtca	100	89.835	ENSOMEG00000000756	rtca	100	89.835	Oryzias_melastigma
ENSMAMG00000016536	rtca	100	66.940	ENSOGAG00000005627	RTCA	100	66.940	Otolemur_garnettii
ENSMAMG00000016536	rtca	87	73.585	ENSOARG00000018122	RTCA	100	73.585	Ovis_aries
ENSMAMG00000016536	rtca	100	69.921	ENSPPAG00000035119	RTCA	100	72.492	Pan_paniscus
ENSMAMG00000016536	rtca	100	73.770	ENSPPRG00000000350	RTCA	100	73.770	Panthera_pardus
ENSMAMG00000016536	rtca	100	73.224	ENSPTIG00000012816	RTCA	100	73.224	Panthera_tigris_altaica
ENSMAMG00000016536	rtca	100	69.921	ENSPTRG00000001004	RTCA	100	72.492	Pan_troglodytes
ENSMAMG00000016536	rtca	100	72.951	ENSPANG00000000346	RTCA	100	72.951	Papio_anubis
ENSMAMG00000016536	rtca	100	82.143	ENSPKIG00000001653	rtca	100	82.143	Paramormyrops_kingsleyae
ENSMAMG00000016536	rtca	100	69.041	ENSPSIG00000011408	RTCA	100	69.041	Pelodiscus_sinensis
ENSMAMG00000016536	rtca	100	71.585	ENSPEMG00000018582	Rtca	100	71.585	Peromyscus_maniculatus_bairdii
ENSMAMG00000016536	rtca	99	56.787	ENSPMAG00000009110	rtca	98	56.787	Petromyzon_marinus
ENSMAMG00000016536	rtca	100	71.858	ENSPCIG00000007684	RTCA	100	71.858	Phascolarctos_cinereus
ENSMAMG00000016536	rtca	100	92.329	ENSPFOG00000004824	rtca	100	92.329	Poecilia_formosa
ENSMAMG00000016536	rtca	100	92.308	ENSPLAG00000011753	rtca	99	92.308	Poecilia_latipinna
ENSMAMG00000016536	rtca	100	92.308	ENSPMEG00000020469	rtca	99	92.308	Poecilia_mexicana
ENSMAMG00000016536	rtca	100	92.033	ENSPREG00000001365	rtca	99	92.033	Poecilia_reticulata
ENSMAMG00000016536	rtca	100	72.678	ENSPPYG00000001115	RTCA	100	72.678	Pongo_abelii
ENSMAMG00000016536	rtca	100	69.945	ENSPCAG00000005076	RTCA	100	69.945	Procavia_capensis
ENSMAMG00000016536	rtca	100	73.497	ENSPCOG00000005603	RTCA	100	73.497	Propithecus_coquereli
ENSMAMG00000016536	rtca	100	68.338	ENSPVAG00000009478	RTCA	100	68.338	Pteropus_vampyrus
ENSMAMG00000016536	rtca	100	93.132	ENSPNYG00000004722	rtca	99	93.132	Pundamilia_nyererei
ENSMAMG00000016536	rtca	100	81.868	ENSPNAG00000022270	rtca	100	81.868	Pygocentrus_nattereri
ENSMAMG00000016536	rtca	100	70.492	ENSRNOG00000014575	Rtca	100	70.492	Rattus_norvegicus
ENSMAMG00000016536	rtca	100	70.185	ENSRBIG00000041180	RTCA	100	72.816	Rhinopithecus_bieti
ENSMAMG00000016536	rtca	100	72.678	ENSRROG00000024929	RTCA	100	72.678	Rhinopithecus_roxellana
ENSMAMG00000016536	rtca	100	72.678	ENSSBOG00000028626	RTCA	100	72.678	Saimiri_boliviensis_boliviensis
ENSMAMG00000016536	rtca	100	71.858	ENSSHAG00000001758	RTCA	100	71.858	Sarcophilus_harrisii
ENSMAMG00000016536	rtca	99	86.704	ENSSMAG00000014680	rtca	98	86.704	Scophthalmus_maximus
ENSMAMG00000016536	rtca	98	94.972	ENSSDUG00000015585	rtca	98	94.475	Seriola_dumerili
ENSMAMG00000016536	rtca	96	95.129	ENSSLDG00000018985	rtca	95	95.129	Seriola_lalandi_dorsalis
ENSMAMG00000016536	rtca	87	68.454	ENSSARG00000013993	RTCA	100	68.454	Sorex_araneus
ENSMAMG00000016536	rtca	100	95.055	ENSSPAG00000011938	rtca	99	95.055	Stegastes_partitus
ENSMAMG00000016536	rtca	100	73.224	ENSSSCG00000006865	RTCA	100	73.224	Sus_scrofa
ENSMAMG00000016536	rtca	100	70.685	ENSTGUG00000005154	RTCA	100	70.685	Taeniopygia_guttata
ENSMAMG00000016536	rtca	100	91.484	ENSTRUG00000008799	rtca	100	91.484	Takifugu_rubripes
ENSMAMG00000016536	rtca	100	87.912	ENSTNIG00000004725	rtca	100	87.912	Tetraodon_nigroviridis
ENSMAMG00000016536	rtca	58	59.048	ENSTBEG00000000943	RTCA	59	59.048	Tupaia_belangeri
ENSMAMG00000016536	rtca	100	70.449	ENSTTRG00000015327	RTCA	100	70.449	Tursiops_truncatus
ENSMAMG00000016536	rtca	96	71.060	ENSUAMG00000017265	RTCA	98	71.060	Ursus_americanus
ENSMAMG00000016536	rtca	100	72.951	ENSUMAG00000007881	RTCA	100	72.951	Ursus_maritimus
ENSMAMG00000016536	rtca	87	65.615	ENSVPAG00000001039	RTCA	84	65.615	Vicugna_pacos
ENSMAMG00000016536	rtca	100	72.951	ENSVVUG00000022041	RTCA	68	72.951	Vulpes_vulpes
ENSMAMG00000016536	rtca	99	58.038	ENSXETG00000031661	RTCA	99	58.038	Xenopus_tropicalis
ENSMAMG00000016536	rtca	100	79.945	ENSXCOG00000008002	rtca	100	79.945	Xiphophorus_couchianus
ENSMAMG00000016536	rtca	100	91.758	ENSXMAG00000005482	rtca	99	91.758	Xiphophorus_maculatus