EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000016542 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 10591 bases
Position: chrOOHQ01000107.1:43265801-43276391
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000024602	zf-C2H2	PF00096.26	7.6e-56	1	10
ENSMAMP00000024602	zf-C2H2	PF00096.26	7.6e-56	2	10
ENSMAMP00000024602	zf-C2H2	PF00096.26	7.6e-56	3	10
ENSMAMP00000024602	zf-C2H2	PF00096.26	7.6e-56	4	10
ENSMAMP00000024602	zf-C2H2	PF00096.26	7.6e-56	5	10
ENSMAMP00000024602	zf-C2H2	PF00096.26	7.6e-56	6	10
ENSMAMP00000024602	zf-C2H2	PF00096.26	7.6e-56	7	10
ENSMAMP00000024602	zf-C2H2	PF00096.26	7.6e-56	8	10
ENSMAMP00000024602	zf-C2H2	PF00096.26	7.6e-56	9	10
ENSMAMP00000024602	zf-C2H2	PF00096.26	7.6e-56	10	10
ENSMAMP00000024602	zf-met	PF12874.7	4e-16	1	2
ENSMAMP00000024602	zf-met	PF12874.7	4e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000025235	-	6875	-	ENSMAMP00000024602	650 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000016542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000016542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000016542	-	61	33.600	ENSMAMG00000013419	prdm5	74	33.600
ENSMAMG00000016542	-	63	35.338	ENSMAMG00000000789	-	75	35.338
ENSMAMG00000016542	-	69	46.595	ENSMAMG00000016119	-	85	46.595
ENSMAMG00000016542	-	60	35.493	ENSMAMG00000022206	-	75	36.896
ENSMAMG00000016542	-	61	46.286	ENSMAMG00000019301	-	94	46.286
ENSMAMG00000016542	-	63	37.952	ENSMAMG00000009555	-	54	37.952
ENSMAMG00000016542	-	65	43.359	ENSMAMG00000013025	-	52	41.176
ENSMAMG00000016542	-	60	40.293	ENSMAMG00000007352	-	99	40.293
ENSMAMG00000016542	-	72	42.759	ENSMAMG00000019385	-	66	42.759
ENSMAMG00000016542	-	71	37.109	ENSMAMG00000009051	-	95	40.240
ENSMAMG00000016542	-	60	36.512	ENSMAMG00000017911	ZNF319	90	36.512
ENSMAMG00000016542	-	60	39.216	ENSMAMG00000022145	-	81	48.810
ENSMAMG00000016542	-	60	44.311	ENSMAMG00000017946	-	78	43.421
ENSMAMG00000016542	-	99	50.000	ENSMAMG00000010902	-	97	42.033
ENSMAMG00000016542	-	67	36.607	ENSMAMG00000009313	znf646	79	36.607
ENSMAMG00000016542	-	71	46.392	ENSMAMG00000016087	-	84	46.392
ENSMAMG00000016542	-	72	39.850	ENSMAMG00000015632	snai2	55	39.850
ENSMAMG00000016542	-	60	40.741	ENSMAMG00000014743	-	53	40.741
ENSMAMG00000016542	-	61	39.462	ENSMAMG00000001808	zbtb47b	71	39.462
ENSMAMG00000016542	-	64	47.561	ENSMAMG00000015434	-	79	47.561
ENSMAMG00000016542	-	66	42.553	ENSMAMG00000016519	-	89	42.553
ENSMAMG00000016542	-	62	35.270	ENSMAMG00000004457	PRDM15	52	36.161
ENSMAMG00000016542	-	67	37.402	ENSMAMG00000015670	-	71	37.402
ENSMAMG00000016542	-	98	45.662	ENSMAMG00000022154	-	98	43.320
ENSMAMG00000016542	-	60	49.541	ENSMAMG00000014734	-	58	49.541
ENSMAMG00000016542	-	65	40.597	ENSMAMG00000002731	znf1056	86	40.597
ENSMAMG00000016542	-	72	45.361	ENSMAMG00000014758	-	83	42.708
ENSMAMG00000016542	-	70	36.283	ENSMAMG00000009817	-	72	46.032
ENSMAMG00000016542	-	65	37.107	ENSMAMG00000011698	scrt1b	62	37.107
ENSMAMG00000016542	-	63	46.617	ENSMAMG00000017939	-	78	46.617
ENSMAMG00000016542	-	59	35.833	ENSMAMG00000021196	zgc:171929	59	35.833
ENSMAMG00000016542	-	60	46.606	ENSMAMG00000022502	-	97	46.606
ENSMAMG00000016542	-	62	42.342	ENSMAMG00000016484	-	99	40.365
ENSMAMG00000016542	-	60	39.634	ENSMAMG00000003040	gfi1b	61	39.412
ENSMAMG00000016542	-	60	38.931	ENSMAMG00000018743	-	76	38.931
ENSMAMG00000016542	-	59	47.879	ENSMAMG00000018071	-	52	47.879
ENSMAMG00000016542	-	61	42.455	ENSMAMG00000018137	-	59	42.455
ENSMAMG00000016542	-	62	35.443	ENSMAMG00000010384	-	61	35.443
ENSMAMG00000016542	-	81	36.170	ENSMAMG00000011931	-	55	36.054
ENSMAMG00000016542	-	63	31.949	ENSMAMG00000023652	patz1	57	31.949
ENSMAMG00000016542	-	72	42.574	ENSMAMG00000001157	znf236	58	47.619
ENSMAMG00000016542	-	59	37.088	ENSMAMG00000015087	znf319b	80	37.088
ENSMAMG00000016542	-	65	41.284	ENSMAMG00000020994	snai1a	74	41.284
ENSMAMG00000016542	-	75	30.481	ENSMAMG00000022147	-	67	33.000
ENSMAMG00000016542	-	59	40.909	ENSMAMG00000015863	-	53	40.909
ENSMAMG00000016542	-	62	45.946	ENSMAMG00000002083	-	96	43.017
ENSMAMG00000016542	-	67	38.636	ENSMAMG00000018536	-	72	33.149
ENSMAMG00000016542	-	60	34.123	ENSMAMG00000002166	zbtb41	61	34.123
ENSMAMG00000016542	-	60	46.512	ENSMAMG00000018114	-	87	46.512
ENSMAMG00000016542	-	69	40.426	ENSMAMG00000022152	-	85	40.426
ENSMAMG00000016542	-	57	36.036	ENSMAMG00000004684	znf526	66	37.168
ENSMAMG00000016542	-	74	43.443	ENSMAMG00000006312	-	90	45.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000016542	-	67	37.656	ENSAPOG00000004328	-	87	39.496	Acanthochromis_polyacanthus
ENSMAMG00000016542	-	99	80.492	ENSAPOG00000013511	-	92	80.492	Acanthochromis_polyacanthus
ENSMAMG00000016542	-	67	35.632	ENSACIG00000010739	-	82	38.554	Amphilophus_citrinellus
ENSMAMG00000016542	-	70	37.659	ENSAOCG00000007045	-	92	37.659	Amphiprion_ocellaris
ENSMAMG00000016542	-	67	40.989	ENSAPEG00000001596	-	83	42.349	Amphiprion_percula
ENSMAMG00000016542	-	100	83.105	ENSAPEG00000016483	-	96	83.105	Amphiprion_percula
ENSMAMG00000016542	-	62	38.462	ENSATEG00000006085	-	87	38.931	Anabas_testudineus
ENSMAMG00000016542	-	64	46.410	ENSACAG00000000082	-	99	46.410	Anolis_carolinensis
ENSMAMG00000016542	-	60	45.091	ENSACAG00000025537	-	96	45.091	Anolis_carolinensis
ENSMAMG00000016542	-	65	45.333	ENSAMXG00000032237	-	96	45.333	Astyanax_mexicanus
ENSMAMG00000016542	-	62	51.095	ENSAMXG00000036257	-	92	46.903	Astyanax_mexicanus
ENSMAMG00000016542	-	62	45.185	ENSAMXG00000026143	-	98	45.185	Astyanax_mexicanus
ENSMAMG00000016542	-	64	39.303	ENSAMXG00000017199	-	51	39.303	Astyanax_mexicanus
ENSMAMG00000016542	-	63	49.537	ENSAMXG00000035145	-	66	48.416	Astyanax_mexicanus
ENSMAMG00000016542	-	66	43.726	ENSAMXG00000012873	-	96	43.478	Astyanax_mexicanus
ENSMAMG00000016542	-	60	50.777	ENSAMXG00000035949	-	77	49.774	Astyanax_mexicanus
ENSMAMG00000016542	-	60	51.493	ENSAMXG00000033013	-	94	45.833	Astyanax_mexicanus
ENSMAMG00000016542	-	63	38.743	ENSCVAG00000011235	-	87	38.743	Cyprinodon_variegatus
ENSMAMG00000016542	-	66	40.822	ENSELUG00000021287	-	85	40.822	Esox_lucius
ENSMAMG00000016542	-	70	54.000	ENSELUG00000013844	-	76	54.000	Esox_lucius
ENSMAMG00000016542	-	56	42.973	ENSELUG00000013357	-	82	42.973	Esox_lucius
ENSMAMG00000016542	-	76	73.896	ENSFHEG00000019915	-	100	70.290	Fundulus_heteroclitus
ENSMAMG00000016542	-	61	43.284	ENSGMOG00000003238	-	99	46.835	Gadus_morhua
ENSMAMG00000016542	-	60	39.403	ENSGAFG00000012977	-	88	39.403	Gambusia_affinis
ENSMAMG00000016542	-	100	66.616	ENSGAFG00000003150	-	100	66.464	Gambusia_affinis
ENSMAMG00000016542	-	62	46.447	ENSIPUG00000006916	-	85	46.447	Ictalurus_punctatus
ENSMAMG00000016542	-	66	49.265	ENSIPUG00000021556	-	96	49.265	Ictalurus_punctatus
ENSMAMG00000016542	-	64	46.114	ENSIPUG00000004428	-	74	46.114	Ictalurus_punctatus
ENSMAMG00000016542	-	66	39.216	ENSKMAG00000004988	-	98	39.216	Kryptolebias_marmoratus
ENSMAMG00000016542	-	61	41.103	ENSLOCG00000014144	-	100	42.895	Lepisosteus_oculatus
ENSMAMG00000016542	-	62	41.554	ENSLOCG00000014366	-	98	41.018	Lepisosteus_oculatus
ENSMAMG00000016542	-	60	46.617	ENSMMOG00000009852	-	86	46.617	Mola_mola
ENSMAMG00000016542	-	62	91.071	ENSMALG00000005554	-	89	91.071	Monopterus_albus
ENSMAMG00000016542	-	60	40.849	ENSOCUG00000005876	-	100	40.849	Oryctolagus_cuniculus
ENSMAMG00000016542	-	99	46.552	ENSPKIG00000006616	-	100	46.275	Paramormyrops_kingsleyae
ENSMAMG00000016542	-	64	37.088	ENSPMGG00000017633	-	91	37.088	Periophthalmus_magnuspinnatus
ENSMAMG00000016542	-	66	37.297	ENSPFOG00000010682	-	94	36.304	Poecilia_formosa
ENSMAMG00000016542	-	70	40.647	ENSPLAG00000002892	-	75	41.441	Poecilia_latipinna
ENSMAMG00000016542	-	60	38.806	ENSPMEG00000001399	-	91	38.806	Poecilia_mexicana
ENSMAMG00000016542	-	60	41.525	ENSPREG00000002582	-	70	41.525	Poecilia_reticulata
ENSMAMG00000016542	-	60	38.806	ENSPREG00000001386	-	91	38.806	Poecilia_reticulata
ENSMAMG00000016542	-	60	48.548	ENSPNAG00000015116	-	71	46.468	Pygocentrus_nattereri
ENSMAMG00000016542	-	81	43.023	ENSPNAG00000025570	-	81	43.023	Pygocentrus_nattereri
ENSMAMG00000016542	-	62	44.144	ENSPNAG00000000219	-	86	44.615	Pygocentrus_nattereri
ENSMAMG00000016542	-	99	44.921	ENSSFOG00015006108	-	99	44.921	Scleropages_formosus
ENSMAMG00000016542	-	67	44.348	ENSSMAG00000009115	-	88	52.830	Scophthalmus_maximus
ENSMAMG00000016542	-	67	38.931	ENSSDUG00000006463	-	86	38.931	Seriola_dumerili
ENSMAMG00000016542	-	100	86.503	ENSSDUG00000002195	-	97	92.262	Seriola_dumerili
ENSMAMG00000016542	-	60	44.444	ENSSLDG00000006724	-	97	44.444	Seriola_lalandi_dorsalis
ENSMAMG00000016542	-	63	65.217	ENSSLDG00000020727	-	96	43.357	Seriola_lalandi_dorsalis
ENSMAMG00000016542	-	63	43.363	ENSSPAG00000012960	-	82	43.363	Stegastes_partitus
ENSMAMG00000016542	-	62	59.756	ENSSPAG00000021008	-	95	59.756	Stegastes_partitus
ENSMAMG00000016542	-	99	87.903	ENSTRUG00000005321	-	96	72.034	Takifugu_rubripes
ENSMAMG00000016542	-	59	34.901	ENSTRUG00000021675	-	77	34.901	Takifugu_rubripes
ENSMAMG00000016542	-	63	38.066	ENSTNIG00000008200	-	100	38.066	Tetraodon_nigroviridis
ENSMAMG00000016542	-	62	46.222	ENSTNIG00000000320	-	100	43.478	Tetraodon_nigroviridis
ENSMAMG00000016542	-	76	46.544	ENSXETG00000006575	znf420	97	45.667	Xenopus_tropicalis
ENSMAMG00000016542	-	61	59.341	ENSXCOG00000009665	-	87	59.341	Xiphophorus_couchianus
ENSMAMG00000016542	-	66	37.297	ENSXMAG00000028625	-	88	39.104	Xiphophorus_maculatus