EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAMG00000016593 (Gene tree)
Gene ID
-
Gene Symbol
snrpf
Alias
snrpfl
Full Name
small nuclear ribonucleoprotein polypeptide F
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Minus strand
Length
1323 bases
Position
chrOOHQ01000056.1:13537706-13539028
Accession
ZDB-GENE-040930-9
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000024876LSMPF01423.221.8e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000025518-258-ENSMAMP0000002487685 (aa)--
Gene Model
Click here to download ENSMAMG00000016593's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000016593's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAMG00000016593snrpf7848.485ENSMAMG00000014029lsm68348.485
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000016593snrpf9996.429ENSG00000139343SNRPF9896.429Homo_sapiens
ENSMAMG00000016593snrpf9998.810ENSAPOG00000003377snrpf6698.810Acanthochromis_polyacanthus
ENSMAMG00000016593snrpf9996.429ENSAMEG00000002166-9996.429Ailuropoda_melanoleuca
ENSMAMG00000016593snrpf8782.432ENSAMEG00000018718-8583.562Ailuropoda_melanoleuca
ENSMAMG00000016593snrpf10098.824ENSACIG00000013216snrpf10098.824Amphilophus_citrinellus
ENSMAMG00000016593snrpf10098.824ENSAOCG00000015108snrpf10098.824Amphiprion_ocellaris
ENSMAMG00000016593snrpf10098.824ENSAPEG00000022022snrpf10098.824Amphiprion_percula
ENSMAMG00000016593snrpf9998.810ENSATEG00000022625snrpf9098.810Anabas_testudineus
ENSMAMG00000016593snrpf8694.521ENSACAG00000014073SNRPF8494.521Anolis_carolinensis
ENSMAMG00000016593snrpf8667.123ENSANAG00000025860-8267.123Aotus_nancymaae
ENSMAMG00000016593snrpf8487.324ENSANAG00000020297-6587.324Aotus_nancymaae
ENSMAMG00000016593snrpf9996.429ENSANAG00000032845SNRPF9896.429Aotus_nancymaae
ENSMAMG00000016593snrpf10098.824ENSACLG00000016066snrpf10098.824Astatotilapia_calliptera
ENSMAMG00000016593snrpf8695.890ENSAMXG00000007421snrpf8595.890Astyanax_mexicanus
ENSMAMG00000016593snrpf9996.429ENSBTAG00000016271SNRPF9896.429Bos_taurus
ENSMAMG00000016593snrpf8989.474ENSBTAG00000050012-9089.041Bos_taurus
ENSMAMG00000016593snrpf9368.354WBGene00004918snr-58770.270Caenorhabditis_elegans
ENSMAMG00000016593snrpf9996.429ENSCJAG00000002705-9896.429Callithrix_jacchus
ENSMAMG00000016593snrpf8588.889ENSCAFG00000031151-8689.189Canis_familiaris
ENSMAMG00000016593snrpf9996.429ENSCAFG00000006395-7696.429Canis_familiaris
ENSMAMG00000016593snrpf8588.889ENSCAFG00020010823-8689.189Canis_lupus_dingo
ENSMAMG00000016593snrpf9284.615ENSCAFG00020013161-7492.857Canis_lupus_dingo
ENSMAMG00000016593snrpf8682.192ENSTSYG00000030635-8482.192Carlito_syrichta
ENSMAMG00000016593snrpf9689.024ENSTSYG00000031636-6290.541Carlito_syrichta
ENSMAMG00000016593snrpf8691.892ENSTSYG00000036502-8591.892Carlito_syrichta
ENSMAMG00000016593snrpf9996.429ENSCAPG00000007242SNRPF9996.429Cavia_aperea
ENSMAMG00000016593snrpf9996.429ENSCPOG00000013898SNRPF9896.429Cavia_porcellus
ENSMAMG00000016593snrpf9986.905ENSCCAG00000033627-5787.671Cebus_capucinus
ENSMAMG00000016593snrpf9996.429ENSCCAG00000037378-9896.429Cebus_capucinus
ENSMAMG00000016593snrpf9995.238ENSCCAG00000017356-8595.890Cebus_capucinus
ENSMAMG00000016593snrpf9996.429ENSCLAG00000007200SNRPF9896.429Chinchilla_lanigera
ENSMAMG00000016593snrpf9996.429ENSCSAG00000003602-6896.429Chlorocebus_sabaeus
ENSMAMG00000016593snrpf7395.161ENSCHOG00000009392SNRPF9795.161Choloepus_hoffmanni
ENSMAMG00000016593snrpf9990.476ENSCPBG00000024287-5991.781Chrysemys_picta_bellii
ENSMAMG00000016593snrpf9984.524ENSCPBG00000001985-8786.301Chrysemys_picta_bellii
ENSMAMG00000016593snrpf8687.671ENSCPBG00000006227-8587.671Chrysemys_picta_bellii
ENSMAMG00000016593snrpf9985.714ENSCPBG00000026463-8586.301Chrysemys_picta_bellii
ENSMAMG00000016593snrpf9989.286ENSCSAVG00000007498-8391.781Ciona_savignyi
ENSMAMG00000016593snrpf8789.189ENSCGRG00001008965-5789.189Cricetulus_griseus_chok1gshd
ENSMAMG00000016593snrpf9996.429ENSCGRG00001017100-9896.429Cricetulus_griseus_chok1gshd
ENSMAMG00000016593snrpf9996.429ENSCGRG00000000336-9896.429Cricetulus_griseus_crigri
ENSMAMG00000016593snrpf9389.873ENSCGRG00000018878-9289.189Cricetulus_griseus_crigri
ENSMAMG00000016593snrpf9997.619ENSCSEG00000004748snrpf9897.619Cynoglossus_semilaevis
ENSMAMG00000016593snrpf9998.810ENSCVAG00000000397snrpf6798.810Cyprinodon_variegatus
ENSMAMG00000016593snrpf9996.512ENSDARG00000105037snrpf9896.512Danio_rerio
ENSMAMG00000016593snrpf8694.521ENSDNOG00000048989-6594.521Dasypus_novemcinctus
ENSMAMG00000016593snrpf8580.556ENSDNOG00000049373-6380.556Dasypus_novemcinctus
ENSMAMG00000016593snrpf9996.429ENSDNOG00000043775-5496.429Dasypus_novemcinctus
ENSMAMG00000016593snrpf8285.714ENSDORG00000025351-9785.714Dipodomys_ordii
ENSMAMG00000016593snrpf6993.220ENSDORG00000029740-7293.220Dipodomys_ordii
ENSMAMG00000016593snrpf9977.381FBgn0000426SmF8380.822Drosophila_melanogaster
ENSMAMG00000016593snrpf9996.429ENSETEG00000001558-9896.429Echinops_telfairi
ENSMAMG00000016593snrpf9676.829ENSEBUG00000001793-7288.060Eptatretus_burgeri
ENSMAMG00000016593snrpf9996.429ENSECAG00000019817SNRPF6896.429Equus_caballus
ENSMAMG00000016593snrpf9996.429ENSEEUG00000013509SNRPF9996.429Erinaceus_europaeus
ENSMAMG00000016593snrpf9996.429ENSELUG00000003121RUXF9896.429Esox_lucius
ENSMAMG00000016593snrpf9992.857ENSELUG00000007737RUXF8494.521Esox_lucius
ENSMAMG00000016593snrpf8672.603ENSFCAG00000021942-8472.603Felis_catus
ENSMAMG00000016593snrpf9996.429ENSFCAG00000029966-9896.429Felis_catus
ENSMAMG00000016593snrpf9674.390ENSFCAG00000031148-7072.368Felis_catus
ENSMAMG00000016593snrpf9996.429ENSFALG00000010799SNRPF9896.429Ficedula_albicollis
ENSMAMG00000016593snrpf9996.429ENSFDAG00000002831-9896.429Fukomys_damarensis
ENSMAMG00000016593snrpf9998.810ENSFHEG00000003240snrpf7498.810Fundulus_heteroclitus
ENSMAMG00000016593snrpf9998.810ENSGMOG00000007741snrpf9998.810Gadus_morhua
ENSMAMG00000016593snrpf9996.429ENSGALG00000011409SNRPF9896.429Gallus_gallus
ENSMAMG00000016593snrpf10097.647ENSGAFG00000016187snrpf9897.647Gambusia_affinis
ENSMAMG00000016593snrpf9997.619ENSGACG00000020055snrpf9997.619Gasterosteus_aculeatus
ENSMAMG00000016593snrpf8789.189ENSGAGG00000012945-6790.411Gopherus_agassizii
ENSMAMG00000016593snrpf7191.667ENSGAGG00000020974-5288.710Gopherus_agassizii
ENSMAMG00000016593snrpf7186.667ENSGAGG00000011163-8689.796Gopherus_agassizii
ENSMAMG00000016593snrpf7982.090ENSGAGG00000014132-8182.090Gopherus_agassizii
ENSMAMG00000016593snrpf9387.342ENSGAGG00000022991-8089.706Gopherus_agassizii
ENSMAMG00000016593snrpf9175.325ENSGGOG00000039564-8873.973Gorilla_gorilla
ENSMAMG00000016593snrpf9676.829ENSGGOG00000039936-8173.973Gorilla_gorilla
ENSMAMG00000016593snrpf10096.471ENSGGOG00000001127-10096.471Gorilla_gorilla
ENSMAMG00000016593snrpf9996.429ENSHGLG00000009108SNRPF9896.429Heterocephalus_glaber_female
ENSMAMG00000016593snrpf8694.521ENSHGLG00000021172-8594.521Heterocephalus_glaber_female
ENSMAMG00000016593snrpf8694.521ENSHGLG00100019596-8594.521Heterocephalus_glaber_male
ENSMAMG00000016593snrpf9996.429ENSHGLG00100008103-9996.429Heterocephalus_glaber_male
ENSMAMG00000016593snrpf7585.915ENSHCOG00000018663snrpf5585.915Hippocampus_comes
ENSMAMG00000016593snrpf10098.824ENSIPUG00000018994snrpf10098.824Ictalurus_punctatus
ENSMAMG00000016593snrpf9996.429ENSSTOG00000010434-9896.429Ictidomys_tridecemlineatus
ENSMAMG00000016593snrpf9996.429ENSJJAG00000011272-9896.429Jaculus_jaculus
ENSMAMG00000016593snrpf7991.045ENSJJAG00000004828-8692.857Jaculus_jaculus
ENSMAMG00000016593snrpf9977.381ENSJJAG00000004558-8778.082Jaculus_jaculus
ENSMAMG00000016593snrpf9980.952ENSJJAG00000010502-8782.192Jaculus_jaculus
ENSMAMG00000016593snrpf10098.824ENSKMAG00000013566snrpf9998.824Kryptolebias_marmoratus
ENSMAMG00000016593snrpf99100.000ENSLBEG00000008800snrpf98100.000Labrus_bergylta
ENSMAMG00000016593snrpf9996.429ENSLACG00000002456-7296.429Latimeria_chalumnae
ENSMAMG00000016593snrpf9996.429ENSLOCG00000015744snrpf9896.429Lepisosteus_oculatus
ENSMAMG00000016593snrpf9996.429ENSLAFG00000017426SNRPF9896.429Loxodonta_africana
ENSMAMG00000016593snrpf10098.824ENSMZEG00005014701snrpf10098.824Maylandia_zebra
ENSMAMG00000016593snrpf9996.429ENSMGAG00000011453-7696.429Meleagris_gallopavo
ENSMAMG00000016593snrpf7495.238ENSMAUG00000019737-8595.238Mesocricetus_auratus
ENSMAMG00000016593snrpf7288.525ENSMAUG00000010289-6692.000Mesocricetus_auratus
ENSMAMG00000016593snrpf7495.238ENSMAUG00000016909-8595.238Mesocricetus_auratus
ENSMAMG00000016593snrpf8691.781ENSMAUG00000008799-8591.781Mesocricetus_auratus
ENSMAMG00000016593snrpf9996.429ENSMICG00000012153-9896.429Microcebus_murinus
ENSMAMG00000016593snrpf8689.041ENSMICG00000030494-5889.041Microcebus_murinus
ENSMAMG00000016593snrpf9996.429ENSMOCG00000020437Snrpf9896.429Microtus_ochrogaster
ENSMAMG00000016593snrpf8683.562ENSMOCG00000022166-8083.562Microtus_ochrogaster
ENSMAMG00000016593snrpf8080.882ENSMOCG00000020220-8780.882Microtus_ochrogaster
ENSMAMG00000016593snrpf9997.619ENSMMOG00000007127snrpf9997.619Mola_mola
ENSMAMG00000016593snrpf9996.429ENSMODG00000008091SNRPF7496.429Monodelphis_domestica
ENSMAMG00000016593snrpf10098.824ENSMALG00000012328snrpf10098.824Monopterus_albus
ENSMAMG00000016593snrpf9996.429MGP_CAROLIEiJ_G0015735-9896.429Mus_caroli
ENSMAMG00000016593snrpf9996.429ENSMUSG00000020018Snrpf9896.429Mus_musculus
ENSMAMG00000016593snrpf9996.429MGP_PahariEiJ_G0031350Snrpf9896.429Mus_pahari
ENSMAMG00000016593snrpf9996.429MGP_SPRETEiJ_G0016553Snrpf9896.429Mus_spretus
ENSMAMG00000016593snrpf9996.429ENSMPUG00000007176-7596.429Mustela_putorius_furo
ENSMAMG00000016593snrpf9996.429ENSMLUG00000013577-9996.429Myotis_lucifugus
ENSMAMG00000016593snrpf9996.429ENSMLUG00000026149-7996.429Myotis_lucifugus
ENSMAMG00000016593snrpf9977.381ENSMLUG00000026269-6975.342Myotis_lucifugus
ENSMAMG00000016593snrpf9996.429ENSMLUG00000029201-7996.429Myotis_lucifugus
ENSMAMG00000016593snrpf9996.429ENSMLUG00000027932-7996.429Myotis_lucifugus
ENSMAMG00000016593snrpf9996.429ENSNGAG00000024292-9896.429Nannospalax_galili
ENSMAMG00000016593snrpf7488.889ENSNGAG00000005851-7188.333Nannospalax_galili
ENSMAMG00000016593snrpf9998.810ENSNBRG00000011682snrpf8698.810Neolamprologus_brichardi
ENSMAMG00000016593snrpf8669.863ENSMEUG00000000671SNRPF8669.863Notamacropus_eugenii
ENSMAMG00000016593snrpf10096.471ENSODEG00000010328-10096.471Octodon_degus
ENSMAMG00000016593snrpf9996.429ENSOCUG00000010925SNRPF7496.429Oryctolagus_cuniculus
ENSMAMG00000016593snrpf8695.890ENSORLG00020008216snrpf8695.890Oryzias_latipes_hni
ENSMAMG00000016593snrpf8695.890ENSORLG00015007418snrpf8695.890Oryzias_latipes_hsok
ENSMAMG00000016593snrpf10097.647ENSOMEG00000003018snrpf10097.647Oryzias_melastigma
ENSMAMG00000016593snrpf8694.521ENSOGAG00000030323-8594.521Otolemur_garnettii
ENSMAMG00000016593snrpf9996.429ENSOARG00000011853-7396.429Ovis_aries
ENSMAMG00000016593snrpf9676.829ENSPPAG00000037544-8173.973Pan_paniscus
ENSMAMG00000016593snrpf9175.325ENSPPAG00000037479-8873.973Pan_paniscus
ENSMAMG00000016593snrpf9673.171ENSPPRG00000007449-7472.603Panthera_pardus
ENSMAMG00000016593snrpf9996.429ENSPPRG00000005875-9896.429Panthera_pardus
ENSMAMG00000016593snrpf9996.429ENSPTIG00000007520SNRPF9896.429Panthera_tigris_altaica
ENSMAMG00000016593snrpf9675.610ENSPTIG00000005117-8772.603Panthera_tigris_altaica
ENSMAMG00000016593snrpf9676.829ENSPTRG00000043814-8173.973Pan_troglodytes
ENSMAMG00000016593snrpf9175.325ENSPTRG00000047717-8873.973Pan_troglodytes
ENSMAMG00000016593snrpf9998.810ENSPKIG00000014784snrpf9298.810Paramormyrops_kingsleyae
ENSMAMG00000016593snrpf9996.429ENSPSIG00000016462SNRPF9896.429Pelodiscus_sinensis
ENSMAMG00000016593snrpf9997.619ENSPMGG00000023548snrpf9997.619Periophthalmus_magnuspinnatus
ENSMAMG00000016593snrpf9996.429ENSPEMG00000023326Snrpf9896.429Peromyscus_maniculatus_bairdii
ENSMAMG00000016593snrpf10098.824ENSPLAG00000023932snrpf10098.824Poecilia_latipinna
ENSMAMG00000016593snrpf10098.824ENSPMEG00000003377snrpf10098.824Poecilia_mexicana
ENSMAMG00000016593snrpf10097.647ENSPREG00000022635snrpf9897.647Poecilia_reticulata
ENSMAMG00000016593snrpf9996.429ENSPPYG00000004847-9896.429Pongo_abelii
ENSMAMG00000016593snrpf9996.429ENSPCOG00000023833-9896.429Propithecus_coquereli
ENSMAMG00000016593snrpf9996.429ENSPVAG00000009036SNRPF9896.429Pteropus_vampyrus
ENSMAMG00000016593snrpf10098.824ENSPNYG00000021712snrpf10098.824Pundamilia_nyererei
ENSMAMG00000016593snrpf10097.647ENSPNAG00000019117snrpf10097.647Pygocentrus_nattereri
ENSMAMG00000016593snrpf9996.429ENSRNOG00000005556Snrpf9896.429Rattus_norvegicus
ENSMAMG00000016593snrpf8693.151ENSRBIG00000030414-8593.151Rhinopithecus_bieti
ENSMAMG00000016593snrpf8693.151ENSRROG00000021975-8593.151Rhinopithecus_roxellana
ENSMAMG00000016593snrpf8261.972YPR182WSMX38361.972Saccharomyces_cerevisiae
ENSMAMG00000016593snrpf9996.429ENSSBOG00000036179-9896.429Saimiri_boliviensis_boliviensis
ENSMAMG00000016593snrpf8680.822ENSSBOG00000032297-8380.822Saimiri_boliviensis_boliviensis
ENSMAMG00000016593snrpf8975.949ENSSBOG00000027638-8975.949Saimiri_boliviensis_boliviensis
ENSMAMG00000016593snrpf8695.890ENSSBOG00000012868-8595.890Saimiri_boliviensis_boliviensis
ENSMAMG00000016593snrpf9996.429ENSSHAG00000012294SNRPF7696.429Sarcophilus_harrisii
ENSMAMG00000016593snrpf7498.413ENSSFOG00015021523snrpf9498.413Scleropages_formosus
ENSMAMG00000016593snrpf9997.619ENSSMAG00000005533snrpf9797.619Scophthalmus_maximus
ENSMAMG00000016593snrpf7498.413ENSSDUG00000016283snrpf7598.413Seriola_dumerili
ENSMAMG00000016593snrpf9372.152ENSSLDG00000003885-8975.342Seriola_lalandi_dorsalis
ENSMAMG00000016593snrpf9998.810ENSSLDG00000005119snrpf9898.810Seriola_lalandi_dorsalis
ENSMAMG00000016593snrpf10096.471ENSSPUG00000014590-10096.471Sphenodon_punctatus
ENSMAMG00000016593snrpf9998.810ENSSPAG00000003283snrpf9598.810Stegastes_partitus
ENSMAMG00000016593snrpf9996.429ENSSSCG00000000895SNRPF9896.429Sus_scrofa
ENSMAMG00000016593snrpf81100.000ENSTRUG00000014956snrpf100100.000Takifugu_rubripes
ENSMAMG00000016593snrpf99100.000ENSTNIG00000012672snrpf98100.000Tetraodon_nigroviridis
ENSMAMG00000016593snrpf8669.863ENSTTRG00000006070SNRPF8569.863Tursiops_truncatus
ENSMAMG00000016593snrpf9996.429ENSUAMG00000008176-9896.429Ursus_americanus
ENSMAMG00000016593snrpf9984.524ENSUAMG00000001101-8686.301Ursus_americanus
ENSMAMG00000016593snrpf8686.301ENSUMAG00000006177-8686.301Ursus_maritimus
ENSMAMG00000016593snrpf9996.429ENSUMAG00000003528-9896.429Ursus_maritimus
ENSMAMG00000016593snrpf9996.429ENSVPAG00000008712-9896.429Vicugna_pacos
ENSMAMG00000016593snrpf8988.158ENSVVUG00000023821-9487.671Vulpes_vulpes
ENSMAMG00000016593snrpf8672.000ENSXETG00000021630snrpf8672.000Xenopus_tropicalis
ENSMAMG00000016593snrpf10097.647ENSXCOG00000013860snrpf9897.647Xiphophorus_couchianus
ENSMAMG00000016593snrpf10098.824ENSXMAG00000015448snrpf10098.824Xiphophorus_maculatus

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