EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000016597 (Gene tree)
Gene ID: 113139751
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 3320 bases
Position: chrOOHQ01000042.1:13843710-13847029
Accession: 113139751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000024688	TRM13	PF05206.14	2.7e-82	1	1
ENSMAMP00000024679	TRM13	PF05206.14	3.7e-82	1	1
ENSMAMP00000024688	zf-U11-48K	PF05253.12	2.1e-09	1	1
ENSMAMP00000024679	zf-U11-48K	PF05253.12	2.2e-09	1	1
ENSMAMP00000024688	zf-TRM13_CCCH	PF11722.8	7.1e-12	1	1
ENSMAMP00000024679	zf-TRM13_CCCH	PF11722.8	7.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000025314	-	1600	-	ENSMAMP00000024679	469 (aa)	XP_026179028	UPI000E461D12
ENSMAMT00000025324	-	1540	-	ENSMAMP00000024688	449 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000016597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000016597's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000016597	trmt13	98	51.477	ENSG00000122435	TRMT13	96	51.477	Homo_sapiens
ENSMAMG00000016597	trmt13	96	73.706	ENSAPOG00000015131	trmt13	99	74.689	Acanthochromis_polyacanthus
ENSMAMG00000016597	trmt13	98	51.688	ENSAMEG00000008917	TRMT13	96	51.688	Ailuropoda_melanoleuca
ENSMAMG00000016597	trmt13	98	74.781	ENSACIG00000005804	trmt13	97	74.781	Amphilophus_citrinellus
ENSMAMG00000016597	trmt13	96	73.499	ENSAOCG00000023585	trmt13	99	73.499	Amphiprion_ocellaris
ENSMAMG00000016597	trmt13	96	73.499	ENSAPEG00000004025	trmt13	99	73.499	Amphiprion_percula
ENSMAMG00000016597	trmt13	99	76.271	ENSATEG00000006597	trmt13	99	76.271	Anabas_testudineus
ENSMAMG00000016597	trmt13	88	52.436	ENSAPLG00000014924	TRMT13	99	52.436	Anas_platyrhynchos
ENSMAMG00000016597	trmt13	95	54.176	ENSACAG00000003498	TRMT13	97	54.176	Anolis_carolinensis
ENSMAMG00000016597	trmt13	98	51.899	ENSANAG00000019525	TRMT13	96	51.899	Aotus_nancymaae
ENSMAMG00000016597	trmt13	96	76.275	ENSACLG00000020018	trmt13	98	76.275	Astatotilapia_calliptera
ENSMAMG00000016597	trmt13	96	54.060	ENSAMXG00000017963	trmt13	97	54.701	Astyanax_mexicanus
ENSMAMG00000016597	trmt13	98	51.153	ENSBTAG00000015781	TRMT13	96	51.153	Bos_taurus
ENSMAMG00000016597	trmt13	98	51.899	ENSCJAG00000000200	TRMT13	89	61.314	Callithrix_jacchus
ENSMAMG00000016597	trmt13	69	49.533	ENSCAFG00000020021	TRMT13	99	49.533	Canis_familiaris
ENSMAMG00000016597	trmt13	55	56.489	ENSCAFG00020011572	TRMT13	89	56.489	Canis_lupus_dingo
ENSMAMG00000016597	trmt13	98	51.050	ENSCHIG00000015395	TRMT13	96	51.050	Capra_hircus
ENSMAMG00000016597	trmt13	99	50.520	ENSTSYG00000010811	TRMT13	88	64.835	Carlito_syrichta
ENSMAMG00000016597	trmt13	73	43.333	ENSCAPG00000009085	TRMT13	94	43.939	Cavia_aperea
ENSMAMG00000016597	trmt13	98	51.163	ENSCPOG00000000694	TRMT13	96	51.163	Cavia_porcellus
ENSMAMG00000016597	trmt13	98	52.110	ENSCCAG00000023772	TRMT13	96	52.110	Cebus_capucinus
ENSMAMG00000016597	trmt13	98	51.899	ENSCATG00000033556	TRMT13	84	64.130	Cercocebus_atys
ENSMAMG00000016597	trmt13	90	50.000	ENSCLAG00000008220	TRMT13	99	50.000	Chinchilla_lanigera
ENSMAMG00000016597	trmt13	98	51.899	ENSCSAG00000001506	TRMT13	96	51.899	Chlorocebus_sabaeus
ENSMAMG00000016597	trmt13	99	53.459	ENSCPBG00000026671	TRMT13	98	53.459	Chrysemys_picta_bellii
ENSMAMG00000016597	trmt13	98	51.688	ENSCANG00000034659	TRMT13	96	51.688	Colobus_angolensis_palliatus
ENSMAMG00000016597	trmt13	95	52.155	ENSCGRG00001021601	Trmt13	95	52.155	Cricetulus_griseus_chok1gshd
ENSMAMG00000016597	trmt13	53	50.199	ENSCGRG00000000093	-	96	50.199	Cricetulus_griseus_crigri
ENSMAMG00000016597	trmt13	96	69.163	ENSCSEG00000000591	trmt13	97	69.163	Cynoglossus_semilaevis
ENSMAMG00000016597	trmt13	96	71.861	ENSCVAG00000017342	trmt13	93	71.861	Cyprinodon_variegatus
ENSMAMG00000016597	trmt13	97	57.356	ENSDARG00000102846	trmt13	97	57.356	Danio_rerio
ENSMAMG00000016597	trmt13	56	54.478	ENSDNOG00000001710	TRMT13	80	54.478	Dasypus_novemcinctus
ENSMAMG00000016597	trmt13	98	51.586	ENSDORG00000015808	Trmt13	96	51.586	Dipodomys_ordii
ENSMAMG00000016597	trmt13	96	33.049	FBgn0037435	CG18048	94	33.475	Drosophila_melanogaster
ENSMAMG00000016597	trmt13	95	46.269	ENSETEG00000005819	TRMT13	95	46.269	Echinops_telfairi
ENSMAMG00000016597	trmt13	95	42.919	ENSEBUG00000014444	trmt13	96	42.919	Eptatretus_burgeri
ENSMAMG00000016597	trmt13	98	50.633	ENSEASG00005015918	TRMT13	96	50.633	Equus_asinus_asinus
ENSMAMG00000016597	trmt13	98	50.844	ENSECAG00000022626	TRMT13	96	50.844	Equus_caballus
ENSMAMG00000016597	trmt13	74	52.381	ENSEEUG00000000294	TRMT13	73	52.381	Erinaceus_europaeus
ENSMAMG00000016597	trmt13	98	55.957	ENSELUG00000003803	trmt13	99	56.383	Esox_lucius
ENSMAMG00000016597	trmt13	98	50.844	ENSFCAG00000030618	TRMT13	96	50.844	Felis_catus
ENSMAMG00000016597	trmt13	97	53.433	ENSFALG00000002424	TRMT13	96	53.433	Ficedula_albicollis
ENSMAMG00000016597	trmt13	97	50.000	ENSFDAG00000006342	TRMT13	96	50.000	Fukomys_damarensis
ENSMAMG00000016597	trmt13	81	71.722	ENSFHEG00000022954	trmt13	99	71.429	Fundulus_heteroclitus
ENSMAMG00000016597	trmt13	95	55.481	ENSGMOG00000013223	trmt13	100	56.600	Gadus_morhua
ENSMAMG00000016597	trmt13	95	53.057	ENSGALG00000005290	TRMT13	97	52.778	Gallus_gallus
ENSMAMG00000016597	trmt13	77	68.306	ENSGAFG00000001577	trmt13	80	68.306	Gambusia_affinis
ENSMAMG00000016597	trmt13	97	78.337	ENSGACG00000013428	trmt13	99	78.337	Gasterosteus_aculeatus
ENSMAMG00000016597	trmt13	99	53.347	ENSGAGG00000023303	TRMT13	97	60.073	Gopherus_agassizii
ENSMAMG00000016597	trmt13	98	51.266	ENSGGOG00000005616	TRMT13	85	62.366	Gorilla_gorilla
ENSMAMG00000016597	trmt13	96	76.718	ENSHBUG00000007754	trmt13	98	76.718	Haplochromis_burtoni
ENSMAMG00000016597	trmt13	97	50.211	ENSHGLG00000002164	TRMT13	96	50.211	Heterocephalus_glaber_female
ENSMAMG00000016597	trmt13	97	50.211	ENSHGLG00100001618	TRMT13	96	50.211	Heterocephalus_glaber_male
ENSMAMG00000016597	trmt13	95	56.140	ENSHCOG00000020553	trmt13	96	56.140	Hippocampus_comes
ENSMAMG00000016597	trmt13	97	55.460	ENSIPUG00000024787	trmt13	100	56.317	Ictalurus_punctatus
ENSMAMG00000016597	trmt13	95	50.759	ENSSTOG00000013483	TRMT13	95	50.759	Ictidomys_tridecemlineatus
ENSMAMG00000016597	trmt13	97	50.851	ENSJJAG00000018012	Trmt13	97	50.851	Jaculus_jaculus
ENSMAMG00000016597	trmt13	73	69.018	ENSKMAG00000007639	trmt13	100	69.018	Kryptolebias_marmoratus
ENSMAMG00000016597	trmt13	96	75.492	ENSLBEG00000020238	trmt13	99	75.764	Labrus_bergylta
ENSMAMG00000016597	trmt13	95	54.310	ENSLACG00000013153	TRMT13	99	52.357	Latimeria_chalumnae
ENSMAMG00000016597	trmt13	96	56.332	ENSLOCG00000000418	trmt13	96	56.332	Lepisosteus_oculatus
ENSMAMG00000016597	trmt13	80	50.402	ENSLAFG00000002383	TRMT13	98	50.402	Loxodonta_africana
ENSMAMG00000016597	trmt13	98	51.477	ENSMFAG00000034681	TRMT13	96	51.477	Macaca_fascicularis
ENSMAMG00000016597	trmt13	98	51.477	ENSMMUG00000004243	TRMT13	96	51.477	Macaca_mulatta
ENSMAMG00000016597	trmt13	98	51.477	ENSMNEG00000036102	TRMT13	96	51.477	Macaca_nemestrina
ENSMAMG00000016597	trmt13	98	51.477	ENSMLEG00000034258	TRMT13	96	51.477	Mandrillus_leucophaeus
ENSMAMG00000016597	trmt13	96	76.053	ENSMZEG00005020959	trmt13	98	76.053	Maylandia_zebra
ENSMAMG00000016597	trmt13	89	53.630	ENSMGAG00000006970	TRMT13	99	53.630	Meleagris_gallopavo
ENSMAMG00000016597	trmt13	95	51.293	ENSMAUG00000010448	Trmt13	95	51.293	Mesocricetus_auratus
ENSMAMG00000016597	trmt13	98	51.471	ENSMICG00000005283	TRMT13	96	51.471	Microcebus_murinus
ENSMAMG00000016597	trmt13	97	51.055	ENSMOCG00000019914	Trmt13	97	51.055	Microtus_ochrogaster
ENSMAMG00000016597	trmt13	54	71.951	ENSMMOG00000007762	trmt13	89	71.951	Mola_mola
ENSMAMG00000016597	trmt13	98	50.105	ENSMODG00000003646	TRMT13	96	50.105	Monodelphis_domestica
ENSMAMG00000016597	trmt13	97	77.243	ENSMALG00000020965	trmt13	97	77.243	Monopterus_albus
ENSMAMG00000016597	trmt13	95	52.061	MGP_CAROLIEiJ_G0025568	Trmt13	100	56.944	Mus_caroli
ENSMAMG00000016597	trmt13	96	52.371	ENSMUSG00000033439	Trmt13	78	72.000	Mus_musculus
ENSMAMG00000016597	trmt13	95	52.165	MGP_PahariEiJ_G0027014	Trmt13	81	70.588	Mus_pahari
ENSMAMG00000016597	trmt13	95	52.814	MGP_SPRETEiJ_G0026518	Trmt13	78	72.000	Mus_spretus
ENSMAMG00000016597	trmt13	82	49.598	ENSMPUG00000002078	-	98	49.600	Mustela_putorius_furo
ENSMAMG00000016597	trmt13	95	52.061	ENSMLUG00000002124	TRMT13	95	52.061	Myotis_lucifugus
ENSMAMG00000016597	trmt13	96	71.397	ENSNBRG00000006783	trmt13	96	71.397	Neolamprologus_brichardi
ENSMAMG00000016597	trmt13	98	51.266	ENSNLEG00000035917	TRMT13	96	51.266	Nomascus_leucogenys
ENSMAMG00000016597	trmt13	51	46.122	ENSMEUG00000013346	-	96	46.122	Notamacropus_eugenii
ENSMAMG00000016597	trmt13	67	56.870	ENSOPRG00000012048	TRMT13	63	56.870	Ochotona_princeps
ENSMAMG00000016597	trmt13	96	77.162	ENSONIG00000004574	trmt13	98	77.162	Oreochromis_niloticus
ENSMAMG00000016597	trmt13	88	51.748	ENSOANG00000012057	TRMT13	97	51.748	Ornithorhynchus_anatinus
ENSMAMG00000016597	trmt13	95	51.844	ENSOCUG00000023095	TRMT13	95	51.844	Oryctolagus_cuniculus
ENSMAMG00000016597	trmt13	97	64.551	ENSORLG00000003320	trmt13	99	64.551	Oryzias_latipes
ENSMAMG00000016597	trmt13	97	66.157	ENSORLG00020005972	trmt13	99	66.157	Oryzias_latipes_hni
ENSMAMG00000016597	trmt13	97	71.335	ENSORLG00015002270	trmt13	99	71.335	Oryzias_latipes_hsok
ENSMAMG00000016597	trmt13	99	70.601	ENSOMEG00000006724	trmt13	96	70.601	Oryzias_melastigma
ENSMAMG00000016597	trmt13	95	51.078	ENSOGAG00000005618	TRMT13	94	50.526	Otolemur_garnettii
ENSMAMG00000016597	trmt13	98	51.050	ENSOARG00000017983	TRMT13	96	51.050	Ovis_aries
ENSMAMG00000016597	trmt13	98	51.471	ENSPPAG00000043736	TRMT13	96	51.471	Pan_paniscus
ENSMAMG00000016597	trmt13	98	50.844	ENSPPRG00000003424	TRMT13	96	50.844	Panthera_pardus
ENSMAMG00000016597	trmt13	98	50.844	ENSPTIG00000018598	TRMT13	96	50.844	Panthera_tigris_altaica
ENSMAMG00000016597	trmt13	98	51.471	ENSPTRG00000001001	TRMT13	96	51.471	Pan_troglodytes
ENSMAMG00000016597	trmt13	98	51.688	ENSPANG00000007598	TRMT13	96	51.688	Papio_anubis
ENSMAMG00000016597	trmt13	97	55.870	ENSPKIG00000001514	trmt13	98	55.870	Paramormyrops_kingsleyae
ENSMAMG00000016597	trmt13	87	52.619	ENSPSIG00000012703	TRMT13	99	52.619	Pelodiscus_sinensis
ENSMAMG00000016597	trmt13	98	61.670	ENSPMGG00000013298	trmt13	95	61.670	Periophthalmus_magnuspinnatus
ENSMAMG00000016597	trmt13	96	52.575	ENSPEMG00000000275	Trmt13	95	52.575	Peromyscus_maniculatus_bairdii
ENSMAMG00000016597	trmt13	95	48.000	ENSPMAG00000000823	trmt13	97	48.000	Petromyzon_marinus
ENSMAMG00000016597	trmt13	100	48.676	ENSPCIG00000007699	TRMT13	99	49.084	Phascolarctos_cinereus
ENSMAMG00000016597	trmt13	96	65.495	ENSPFOG00000008675	trmt13	96	65.495	Poecilia_formosa
ENSMAMG00000016597	trmt13	96	65.646	ENSPLAG00000009709	trmt13	99	65.646	Poecilia_latipinna
ENSMAMG00000016597	trmt13	96	65.502	ENSPMEG00000022954	trmt13	99	65.502	Poecilia_mexicana
ENSMAMG00000016597	trmt13	84	65.337	ENSPREG00000005645	trmt13	92	65.909	Poecilia_reticulata
ENSMAMG00000016597	trmt13	98	51.266	ENSPPYG00000001120	TRMT13	97	51.266	Pongo_abelii
ENSMAMG00000016597	trmt13	98	50.951	ENSPCAG00000002340	TRMT13	96	50.951	Procavia_capensis
ENSMAMG00000016597	trmt13	98	50.422	ENSPCOG00000017984	TRMT13	96	50.422	Propithecus_coquereli
ENSMAMG00000016597	trmt13	98	51.266	ENSPVAG00000017430	TRMT13	96	51.266	Pteropus_vampyrus
ENSMAMG00000016597	trmt13	96	76.566	ENSPNYG00000013690	trmt13	98	76.566	Pundamilia_nyererei
ENSMAMG00000016597	trmt13	96	54.565	ENSPNAG00000022130	trmt13	97	54.565	Pygocentrus_nattereri
ENSMAMG00000016597	trmt13	95	53.118	ENSRNOG00000015140	Trmt13	92	53.118	Rattus_norvegicus
ENSMAMG00000016597	trmt13	98	51.688	ENSRBIG00000037686	TRMT13	96	51.688	Rhinopithecus_bieti
ENSMAMG00000016597	trmt13	98	52.539	ENSRROG00000044057	TRMT13	96	52.539	Rhinopithecus_roxellana
ENSMAMG00000016597	trmt13	98	51.891	ENSSBOG00000026541	TRMT13	96	51.891	Saimiri_boliviensis_boliviensis
ENSMAMG00000016597	trmt13	93	50.111	ENSSHAG00000005213	TRMT13	98	50.111	Sarcophilus_harrisii
ENSMAMG00000016597	trmt13	96	57.143	ENSSFOG00015017560	trmt13	97	57.576	Scleropages_formosus
ENSMAMG00000016597	trmt13	95	77.434	ENSSMAG00000014592	trmt13	95	77.434	Scophthalmus_maximus
ENSMAMG00000016597	trmt13	95	79.176	ENSSDUG00000015508	trmt13	96	78.678	Seriola_dumerili
ENSMAMG00000016597	trmt13	96	79.221	ENSSLDG00000019060	trmt13	95	79.221	Seriola_lalandi_dorsalis
ENSMAMG00000016597	trmt13	99	46.960	ENSSARG00000010344	TRMT13	99	46.960	Sorex_araneus
ENSMAMG00000016597	trmt13	95	52.183	ENSSPUG00000016339	TRMT13	98	52.183	Sphenodon_punctatus
ENSMAMG00000016597	trmt13	96	77.434	ENSSPAG00000011922	trmt13	99	76.906	Stegastes_partitus
ENSMAMG00000016597	trmt13	98	52.539	ENSSSCG00000006869	TRMT13	96	52.539	Sus_scrofa
ENSMAMG00000016597	trmt13	96	53.595	ENSTGUG00000005253	TRMT13	98	53.595	Taeniopygia_guttata
ENSMAMG00000016597	trmt13	94	67.699	ENSTRUG00000008400	trmt13	97	67.325	Takifugu_rubripes
ENSMAMG00000016597	trmt13	88	39.810	ENSTBEG00000008911	TRMT13	99	39.810	Tupaia_belangeri
ENSMAMG00000016597	trmt13	98	50.763	ENSUAMG00000017251	TRMT13	96	50.763	Ursus_americanus
ENSMAMG00000016597	trmt13	98	51.899	ENSUMAG00000007901	TRMT13	99	51.131	Ursus_maritimus
ENSMAMG00000016597	trmt13	79	76.316	ENSVPAG00000001034	TRMT13	82	76.316	Vicugna_pacos
ENSMAMG00000016597	trmt13	97	50.743	ENSVVUG00000021996	TRMT13	96	50.743	Vulpes_vulpes
ENSMAMG00000016597	trmt13	97	51.931	ENSXETG00000013204	trmt13	99	51.931	Xenopus_tropicalis
ENSMAMG00000016597	trmt13	96	64.989	ENSXMAG00000010765	trmt13	99	64.989	Xiphophorus_maculatus