EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000016837 (Gene tree)
Gene ID: 113132524
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 19499 bases
Position: chrOOHQ01000074.1:17449460-17468958
Accession: 113132524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000025169	CPSF_A	PF03178.15	3.8e-99	1	1
ENSMAMP00000025130	CPSF_A	PF03178.15	3.9e-99	1	1
ENSMAMP00000025145	CPSF_A	PF03178.15	3.9e-99	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000025778	-	4488	-	ENSMAMP00000025130	1217 (aa)	XP_026166462	UPI000E46583A
ENSMAMT00000025793	-	3856	XM_026310678	ENSMAMP00000025145	1217 (aa)	XP_026166462	UPI000E46583A
ENSMAMT00000025818	-	3621	-	ENSMAMP00000025169	1206 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000016837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000016837's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000016837	sf3b3	100	93.509	ENSG00000189091	SF3B3	100	98.246	Homo_sapiens
ENSMAMG00000016837	sf3b3	96	99.231	ENSAPOG00000006172	sf3b3	98	99.231	Acanthochromis_polyacanthus
ENSMAMG00000016837	sf3b3	100	93.361	ENSAMEG00000002187	SF3B3	100	93.361	Ailuropoda_melanoleuca
ENSMAMG00000016837	sf3b3	92	95.804	ENSACIG00000016487	sf3b3	100	95.804	Amphilophus_citrinellus
ENSMAMG00000016837	sf3b3	100	99.178	ENSAOCG00000007158	sf3b3	100	99.178	Amphiprion_ocellaris
ENSMAMG00000016837	sf3b3	100	99.178	ENSAPEG00000022786	sf3b3	100	99.178	Amphiprion_percula
ENSMAMG00000016837	sf3b3	100	98.767	ENSATEG00000013708	sf3b3	100	98.767	Anabas_testudineus
ENSMAMG00000016837	sf3b3	81	93.496	ENSAPLG00000004996	SF3B3	99	93.496	Anas_platyrhynchos
ENSMAMG00000016837	sf3b3	100	93.591	ENSACAG00000001817	SF3B3	100	93.591	Anolis_carolinensis
ENSMAMG00000016837	sf3b3	100	93.509	ENSANAG00000028001	SF3B3	100	93.509	Aotus_nancymaae
ENSMAMG00000016837	sf3b3	96	98.634	ENSACLG00000022555	sf3b3	98	98.634	Astatotilapia_calliptera
ENSMAMG00000016837	sf3b3	100	97.699	ENSAMXG00000003410	sf3b3	100	97.699	Astyanax_mexicanus
ENSMAMG00000016837	sf3b3	100	93.509	ENSBTAG00000010627	SF3B3	100	93.509	Bos_taurus
ENSMAMG00000016837	sf3b3	100	59.935	WBGene00019323	teg-4	100	59.935	Caenorhabditis_elegans
ENSMAMG00000016837	sf3b3	100	93.509	ENSCJAG00000014773	SF3B3	99	93.509	Callithrix_jacchus
ENSMAMG00000016837	sf3b3	100	93.591	ENSCAFG00000020151	SF3B3	100	93.591	Canis_familiaris
ENSMAMG00000016837	sf3b3	100	93.591	ENSCAFG00020020912	SF3B3	100	93.591	Canis_lupus_dingo
ENSMAMG00000016837	sf3b3	100	93.591	ENSCHIG00000019822	SF3B3	100	93.591	Capra_hircus
ENSMAMG00000016837	sf3b3	100	93.509	ENSTSYG00000007910	SF3B3	100	93.509	Carlito_syrichta
ENSMAMG00000016837	sf3b3	84	80.092	ENSCAPG00000001484	SF3B3	92	80.092	Cavia_aperea
ENSMAMG00000016837	sf3b3	100	92.194	ENSCPOG00000000586	SF3B3	100	92.194	Cavia_porcellus
ENSMAMG00000016837	sf3b3	100	93.509	ENSCCAG00000017736	SF3B3	100	93.509	Cebus_capucinus
ENSMAMG00000016837	sf3b3	100	93.509	ENSCATG00000036562	SF3B3	100	93.509	Cercocebus_atys
ENSMAMG00000016837	sf3b3	100	93.509	ENSCLAG00000003921	SF3B3	100	93.509	Chinchilla_lanigera
ENSMAMG00000016837	sf3b3	100	93.509	ENSCSAG00000004371	SF3B3	100	93.509	Chlorocebus_sabaeus
ENSMAMG00000016837	sf3b3	90	90.031	ENSCHOG00000001878	SF3B3	90	90.031	Choloepus_hoffmanni
ENSMAMG00000016837	sf3b3	100	93.180	ENSCPBG00000015853	SF3B3	100	93.180	Chrysemys_picta_bellii
ENSMAMG00000016837	sf3b3	100	80.049	ENSCING00000001342	-	100	80.049	Ciona_intestinalis
ENSMAMG00000016837	sf3b3	99	78.489	ENSCSAVG00000011454	-	100	78.489	Ciona_savignyi
ENSMAMG00000016837	sf3b3	100	89.893	ENSCANG00000042920	SF3B3	100	90.386	Colobus_angolensis_palliatus
ENSMAMG00000016837	sf3b3	100	93.426	ENSCGRG00001015908	Sf3b3	100	93.426	Cricetulus_griseus_chok1gshd
ENSMAMG00000016837	sf3b3	100	93.426	ENSCGRG00000010180	Sf3b3	100	93.426	Cricetulus_griseus_crigri
ENSMAMG00000016837	sf3b3	82	96.707	ENSCSEG00000014192	sf3b3	99	96.707	Cynoglossus_semilaevis
ENSMAMG00000016837	sf3b3	100	98.028	ENSCVAG00000010459	sf3b3	100	98.028	Cyprinodon_variegatus
ENSMAMG00000016837	sf3b3	100	97.206	ENSDARG00000103553	sf3b3	100	97.206	Danio_rerio
ENSMAMG00000016837	sf3b3	85	93.153	ENSDNOG00000043626	SF3B3	100	93.153	Dasypus_novemcinctus
ENSMAMG00000016837	sf3b3	100	93.509	ENSDORG00000014176	Sf3b3	100	93.509	Dipodomys_ordii
ENSMAMG00000016837	sf3b3	100	74.735	FBgn0035162	Sf3b3	100	74.735	Drosophila_melanogaster
ENSMAMG00000016837	sf3b3	84	96.203	ENSETEG00000002729	SF3B3	84	96.203	Echinops_telfairi
ENSMAMG00000016837	sf3b3	100	86.771	ENSEBUG00000006117	sf3b3	100	86.771	Eptatretus_burgeri
ENSMAMG00000016837	sf3b3	100	93.591	ENSEASG00005013376	SF3B3	100	93.591	Equus_asinus_asinus
ENSMAMG00000016837	sf3b3	100	93.591	ENSECAG00000014053	SF3B3	100	93.591	Equus_caballus
ENSMAMG00000016837	sf3b3	93	93.158	ENSEEUG00000015611	SF3B3	93	93.158	Erinaceus_europaeus
ENSMAMG00000016837	sf3b3	100	96.066	ENSELUG00000015417	sf3b3	100	96.066	Esox_lucius
ENSMAMG00000016837	sf3b3	100	93.591	ENSFCAG00000009487	SF3B3	100	93.591	Felis_catus
ENSMAMG00000016837	sf3b3	100	93.262	ENSFALG00000007372	SF3B3	100	93.262	Ficedula_albicollis
ENSMAMG00000016837	sf3b3	100	93.509	ENSFDAG00000002608	SF3B3	100	93.509	Fukomys_damarensis
ENSMAMG00000016837	sf3b3	100	98.685	ENSFHEG00000017824	sf3b3	100	98.685	Fundulus_heteroclitus
ENSMAMG00000016837	sf3b3	100	93.514	ENSGMOG00000008139	sf3b3	100	93.514	Gadus_morhua
ENSMAMG00000016837	sf3b3	100	93.509	ENSGALG00000002531	SF3B3	100	93.509	Gallus_gallus
ENSMAMG00000016837	sf3b3	100	97.946	ENSGAFG00000015206	sf3b3	100	97.946	Gambusia_affinis
ENSMAMG00000016837	sf3b3	100	98.194	ENSGACG00000002646	sf3b3	100	98.194	Gasterosteus_aculeatus
ENSMAMG00000016837	sf3b3	96	93.339	ENSGAGG00000006746	SF3B3	97	93.339	Gopherus_agassizii
ENSMAMG00000016837	sf3b3	100	93.509	ENSGGOG00000003246	SF3B3	100	93.509	Gorilla_gorilla
ENSMAMG00000016837	sf3b3	92	91.607	ENSHBUG00000005960	sf3b3	100	91.607	Haplochromis_burtoni
ENSMAMG00000016837	sf3b3	100	93.509	ENSHGLG00000010135	SF3B3	100	93.509	Heterocephalus_glaber_female
ENSMAMG00000016837	sf3b3	100	91.403	ENSHGLG00100011148	SF3B3	100	91.403	Heterocephalus_glaber_male
ENSMAMG00000016837	sf3b3	100	97.699	ENSHCOG00000011981	sf3b3	100	97.699	Hippocampus_comes
ENSMAMG00000016837	sf3b3	100	97.699	ENSIPUG00000020435	sf3b3	100	97.699	Ictalurus_punctatus
ENSMAMG00000016837	sf3b3	100	93.509	ENSSTOG00000007065	SF3B3	100	93.509	Ictidomys_tridecemlineatus
ENSMAMG00000016837	sf3b3	100	93.509	ENSJJAG00000003948	Sf3b3	100	93.509	Jaculus_jaculus
ENSMAMG00000016837	sf3b3	100	96.138	ENSKMAG00000004066	sf3b3	99	98.377	Kryptolebias_marmoratus
ENSMAMG00000016837	sf3b3	100	98.439	ENSLBEG00000018302	sf3b3	100	98.439	Labrus_bergylta
ENSMAMG00000016837	sf3b3	98	90.449	ENSLACG00000012501	SF3B3	99	90.449	Latimeria_chalumnae
ENSMAMG00000016837	sf3b3	100	96.962	ENSLOCG00000007566	sf3b3	100	96.962	Lepisosteus_oculatus
ENSMAMG00000016837	sf3b3	100	93.591	ENSLAFG00000012219	SF3B3	100	93.591	Loxodonta_africana
ENSMAMG00000016837	sf3b3	100	93.509	ENSMFAG00000045487	SF3B3	100	93.509	Macaca_fascicularis
ENSMAMG00000016837	sf3b3	100	93.509	ENSMMUG00000017812	SF3B3	100	93.509	Macaca_mulatta
ENSMAMG00000016837	sf3b3	100	93.509	ENSMNEG00000033385	SF3B3	100	93.509	Macaca_nemestrina
ENSMAMG00000016837	sf3b3	100	89.975	ENSMLEG00000043891	SF3B3	100	89.975	Mandrillus_leucophaeus
ENSMAMG00000016837	sf3b3	100	98.685	ENSMZEG00005010836	sf3b3	100	98.685	Maylandia_zebra
ENSMAMG00000016837	sf3b3	89	95.560	ENSMZEG00005026015	sf3b3	99	95.560	Maylandia_zebra
ENSMAMG00000016837	sf3b3	100	93.509	ENSMGAG00000001597	SF3B3	100	93.509	Meleagris_gallopavo
ENSMAMG00000016837	sf3b3	81	76.280	ENSMAUG00000013618	Sf3b3	95	77.029	Mesocricetus_auratus
ENSMAMG00000016837	sf3b3	100	92.535	ENSMICG00000001363	SF3B3	100	92.535	Microcebus_murinus
ENSMAMG00000016837	sf3b3	100	93.426	ENSMOCG00000006108	Sf3b3	100	93.426	Microtus_ochrogaster
ENSMAMG00000016837	sf3b3	89	95.652	ENSMMOG00000002598	sf3b3	97	95.652	Mola_mola
ENSMAMG00000016837	sf3b3	100	89.491	ENSMODG00000014363	SF3B3	100	89.491	Monodelphis_domestica
ENSMAMG00000016837	sf3b3	100	98.685	ENSMALG00000008014	sf3b3	100	98.685	Monopterus_albus
ENSMAMG00000016837	sf3b3	100	93.509	MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.509	Mus_caroli
ENSMAMG00000016837	sf3b3	100	93.426	ENSMUSG00000033732	Sf3b3	100	93.426	Mus_musculus
ENSMAMG00000016837	sf3b3	100	93.344	MGP_SPRETEiJ_G0032681	Sf3b3	100	93.344	Mus_spretus
ENSMAMG00000016837	sf3b3	100	93.591	ENSMPUG00000010277	SF3B3	100	93.591	Mustela_putorius_furo
ENSMAMG00000016837	sf3b3	100	93.426	ENSMLUG00000014607	SF3B3	100	93.426	Myotis_lucifugus
ENSMAMG00000016837	sf3b3	100	93.509	ENSNGAG00000021903	Sf3b3	100	93.509	Nannospalax_galili
ENSMAMG00000016837	sf3b3	83	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSMAMG00000016837	sf3b3	100	92.036	ENSNLEG00000016127	SF3B3	100	92.036	Nomascus_leucogenys
ENSMAMG00000016837	sf3b3	92	89.410	ENSMEUG00000004479	SF3B3	94	89.410	Notamacropus_eugenii
ENSMAMG00000016837	sf3b3	98	90.360	ENSOPRG00000009847	SF3B3	100	90.360	Ochotona_princeps
ENSMAMG00000016837	sf3b3	100	93.509	ENSODEG00000014154	SF3B3	100	93.509	Octodon_degus
ENSMAMG00000016837	sf3b3	100	98.767	ENSONIG00000011198	sf3b3	100	98.767	Oreochromis_niloticus
ENSMAMG00000016837	sf3b3	100	93.673	ENSOANG00000001161	-	100	93.673	Ornithorhynchus_anatinus
ENSMAMG00000016837	sf3b3	100	91.537	ENSOCUG00000004139	SF3B3	100	91.537	Oryctolagus_cuniculus
ENSMAMG00000016837	sf3b3	100	98.028	ENSORLG00000013472	sf3b3	100	98.028	Oryzias_latipes
ENSMAMG00000016837	sf3b3	100	98.028	ENSORLG00020017473	sf3b3	100	98.028	Oryzias_latipes_hni
ENSMAMG00000016837	sf3b3	100	97.864	ENSORLG00015007710	sf3b3	100	97.864	Oryzias_latipes_hsok
ENSMAMG00000016837	sf3b3	100	97.781	ENSOMEG00000014483	sf3b3	100	97.781	Oryzias_melastigma
ENSMAMG00000016837	sf3b3	100	93.197	ENSOGAG00000016051	SF3B3	100	93.197	Otolemur_garnettii
ENSMAMG00000016837	sf3b3	100	93.361	ENSOARG00000004816	SF3B3	100	93.361	Ovis_aries
ENSMAMG00000016837	sf3b3	100	93.509	ENSPPAG00000026807	SF3B3	100	93.509	Pan_paniscus
ENSMAMG00000016837	sf3b3	100	93.591	ENSPPRG00000001686	SF3B3	100	93.591	Panthera_pardus
ENSMAMG00000016837	sf3b3	89	90.616	ENSPTIG00000020382	SF3B3	100	90.616	Panthera_tigris_altaica
ENSMAMG00000016837	sf3b3	100	93.509	ENSPTRG00000008308	SF3B3	100	93.509	Pan_troglodytes
ENSMAMG00000016837	sf3b3	100	93.509	ENSPANG00000024075	SF3B3	100	93.509	Papio_anubis
ENSMAMG00000016837	sf3b3	100	97.206	ENSPKIG00000002712	sf3b3	100	97.206	Paramormyrops_kingsleyae
ENSMAMG00000016837	sf3b3	89	93.284	ENSPSIG00000002232	SF3B3	100	93.284	Pelodiscus_sinensis
ENSMAMG00000016837	sf3b3	100	93.426	ENSPEMG00000008603	Sf3b3	100	93.426	Peromyscus_maniculatus_bairdii
ENSMAMG00000016837	sf3b3	100	90.633	ENSPMAG00000001793	sf3b3	100	90.633	Petromyzon_marinus
ENSMAMG00000016837	sf3b3	100	93.673	ENSPCIG00000014927	SF3B3	100	93.673	Phascolarctos_cinereus
ENSMAMG00000016837	sf3b3	100	98.192	ENSPFOG00000015516	sf3b3	100	98.192	Poecilia_formosa
ENSMAMG00000016837	sf3b3	100	98.192	ENSPLAG00000014330	sf3b3	100	98.192	Poecilia_latipinna
ENSMAMG00000016837	sf3b3	100	98.274	ENSPMEG00000019856	sf3b3	100	98.274	Poecilia_mexicana
ENSMAMG00000016837	sf3b3	81	97.967	ENSPREG00000019669	sf3b3	97	97.967	Poecilia_reticulata
ENSMAMG00000016837	sf3b3	95	94.030	ENSPPYG00000007539	SF3B3	100	94.030	Pongo_abelii
ENSMAMG00000016837	sf3b3	100	73.048	ENSPCAG00000002623	SF3B3	100	73.048	Procavia_capensis
ENSMAMG00000016837	sf3b3	84	97.196	ENSPCOG00000026582	SF3B3	100	97.196	Propithecus_coquereli
ENSMAMG00000016837	sf3b3	100	93.509	ENSPVAG00000000684	SF3B3	100	93.509	Pteropus_vampyrus
ENSMAMG00000016837	sf3b3	100	98.603	ENSPNYG00000003528	sf3b3	100	98.603	Pundamilia_nyererei
ENSMAMG00000016837	sf3b3	100	97.699	ENSPNAG00000015419	sf3b3	100	97.699	Pygocentrus_nattereri
ENSMAMG00000016837	sf3b3	100	93.426	ENSRNOG00000017724	Sf3b3	100	93.426	Rattus_norvegicus
ENSMAMG00000016837	sf3b3	100	93.509	ENSRBIG00000021904	SF3B3	100	93.509	Rhinopithecus_bieti
ENSMAMG00000016837	sf3b3	100	93.509	ENSRROG00000045703	SF3B3	100	93.509	Rhinopithecus_roxellana
ENSMAMG00000016837	sf3b3	100	93.509	ENSSBOG00000029156	SF3B3	100	93.509	Saimiri_boliviensis_boliviensis
ENSMAMG00000016837	sf3b3	100	93.673	ENSSHAG00000000372	SF3B3	100	93.673	Sarcophilus_harrisii
ENSMAMG00000016837	sf3b3	100	97.453	ENSSFOG00015012877	sf3b3	100	97.453	Scleropages_formosus
ENSMAMG00000016837	sf3b3	100	97.781	ENSSMAG00000014386	sf3b3	100	97.781	Scophthalmus_maximus
ENSMAMG00000016837	sf3b3	100	99.178	ENSSDUG00000021201	sf3b3	100	99.178	Seriola_dumerili
ENSMAMG00000016837	sf3b3	100	99.096	ENSSLDG00000017532	sf3b3	100	99.096	Seriola_lalandi_dorsalis
ENSMAMG00000016837	sf3b3	93	93.382	ENSSARG00000006917	SF3B3	93	93.382	Sorex_araneus
ENSMAMG00000016837	sf3b3	100	93.344	ENSSPUG00000006253	SF3B3	100	93.344	Sphenodon_punctatus
ENSMAMG00000016837	sf3b3	100	91.208	ENSSPAG00000003125	sf3b3	100	91.208	Stegastes_partitus
ENSMAMG00000016837	sf3b3	100	93.591	ENSSSCG00000025323	SF3B3	100	93.591	Sus_scrofa
ENSMAMG00000016837	sf3b3	100	93.432	ENSTGUG00000006082	SF3B3	100	93.432	Taeniopygia_guttata
ENSMAMG00000016837	sf3b3	89	97.886	ENSTNIG00000004857	sf3b3	100	97.886	Tetraodon_nigroviridis
ENSMAMG00000016837	sf3b3	93	79.489	ENSTBEG00000002946	SF3B3	100	79.489	Tupaia_belangeri
ENSMAMG00000016837	sf3b3	100	92.769	ENSTTRG00000005855	SF3B3	100	92.769	Tursiops_truncatus
ENSMAMG00000016837	sf3b3	100	93.591	ENSUAMG00000006780	SF3B3	100	93.591	Ursus_americanus
ENSMAMG00000016837	sf3b3	100	93.591	ENSUMAG00000017757	SF3B3	100	93.591	Ursus_maritimus
ENSMAMG00000016837	sf3b3	100	78.554	ENSVPAG00000003202	SF3B3	100	78.554	Vicugna_pacos
ENSMAMG00000016837	sf3b3	100	93.591	ENSVVUG00000017922	SF3B3	100	93.591	Vulpes_vulpes
ENSMAMG00000016837	sf3b3	100	94.002	ENSXETG00000032869	SF3B3	100	94.002	Xenopus_tropicalis
ENSMAMG00000016837	sf3b3	77	98.195	ENSXCOG00000013628	sf3b3	97	98.195	Xiphophorus_couchianus
ENSMAMG00000016837	sf3b3	100	98.192	ENSXMAG00000006334	sf3b3	100	98.192	Xiphophorus_maculatus