EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMAMG00000016840 (Gene tree)
Gene ID
113124008
Gene Symbol
aff3
Alias
id:ibd5053|si:dkey-19j7.2
Full Name
AF4/FMR2 family%2C member 3
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Minus strand
Length
12154 bases
Position
chrOOHQ01000093.1:17643656-17655809
Accession
ZDB-GENE-030219-193
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000025033AF-4PF05110.136e-12611
ENSMAMP00000025048AF-4PF05110.131.7e-11412
ENSMAMP00000025048AF-4PF05110.131.7e-11422
ENSMAMP00000025056AF-4PF05110.138.7e-10811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000025696-3659-ENSMAMP000000250481161 (aa)--
ENSMAMT00000025704-3135-ENSMAMP000000250561029 (aa)--
ENSMAMT00000025681-4649-ENSMAMP000000250331147 (aa)--
Gene Model
Click here to download ENSMAMG00000016840's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000016840's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000016840aff39871.227ENSAPOG00000006031aff39970.697Acanthochromis_polyacanthus
ENSMAMG00000016840aff39870.646ENSAPEG00000006641aff39771.580Amphiprion_percula
ENSMAMG00000016840aff39976.354ENSATEG00000008905aff39775.236Anabas_testudineus
ENSMAMG00000016840aff39862.554ENSCVAG00000019194aff310062.207Cyprinodon_variegatus
ENSMAMG00000016840aff39760.469ENSELUG00000020087aff39461.638Esox_lucius
ENSMAMG00000016840aff38859.052ENSGAFG00000021231aff39958.350Gambusia_affinis
ENSMAMG00000016840aff39944.036ENSIPUG00000004129aff39743.924Ictalurus_punctatus
ENSMAMG00000016840aff39964.519ENSKMAG00000001570aff39966.164Kryptolebias_marmoratus
ENSMAMG00000016840aff39959.149ENSORLG00000022089aff39858.262Oryzias_latipes
ENSMAMG00000016840aff39958.609ENSORLG00020011289aff39860.377Oryzias_latipes_hni
ENSMAMG00000016840aff39759.063ENSORLG00015014530aff39958.657Oryzias_latipes_hsok
ENSMAMG00000016840aff39957.398ENSOMEG00000011755aff39958.611Oryzias_melastigma
ENSMAMG00000016840aff39864.186ENSPFOG00000015830aff39764.098Poecilia_formosa
ENSMAMG00000016840aff39864.860ENSPREG00000008458aff39864.773Poecilia_reticulata
ENSMAMG00000016840aff39974.147ENSSMAG00000019954aff39874.060Scophthalmus_maximus
ENSMAMG00000016840aff39976.647ENSSLDG00000005399aff310076.174Seriola_lalandi_dorsalis
ENSMAMG00000016840aff39973.865ENSSPAG00000020071aff39875.307Stegastes_partitus
ENSMAMG00000016840aff39963.652ENSXMAG00000030063aff39863.424Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us