EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000017109 (Gene tree)
Gene ID: 113123505
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 4053 bases
Position: chrOOHQ01000093.1:17926402-17930454
Accession: 113123505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000025477	RNase_H2-Ydr279	PF09468.10	3.9e-17	1	1
ENSMAMP00000025482	RNase_H2-Ydr279	PF09468.10	4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000026131	-	1294	-	ENSMAMP00000025477	296 (aa)	-	-
ENSMAMT00000026136	-	978	-	ENSMAMP00000025482	306 (aa)	XP_026151439	UPI000E45D419

Gene Model

Click here to download ENSMAMG00000017109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000017109's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000017109	rnaseh2b	87	54.104	ENSG00000136104	RNASEH2B	99	53.043	Homo_sapiens
ENSMAMG00000017109	rnaseh2b	100	90.850	ENSAPOG00000010496	rnaseh2b	100	90.850	Acanthochromis_polyacanthus
ENSMAMG00000017109	rnaseh2b	87	52.399	ENSAMEG00000012040	RNASEH2B	92	52.399	Ailuropoda_melanoleuca
ENSMAMG00000017109	rnaseh2b	100	75.163	ENSACIG00000021991	rnaseh2b	97	80.500	Amphilophus_citrinellus
ENSMAMG00000017109	rnaseh2b	100	89.869	ENSAOCG00000013398	rnaseh2b	100	89.869	Amphiprion_ocellaris
ENSMAMG00000017109	rnaseh2b	100	89.542	ENSAPEG00000006033	rnaseh2b	100	89.542	Amphiprion_percula
ENSMAMG00000017109	rnaseh2b	100	88.889	ENSATEG00000008370	rnaseh2b	100	88.889	Anabas_testudineus
ENSMAMG00000017109	rnaseh2b	83	65.370	ENSAPLG00000008955	RNASEH2B	99	65.441	Anas_platyrhynchos
ENSMAMG00000017109	rnaseh2b	93	57.241	ENSACAG00000011679	RNASEH2B	97	57.241	Anolis_carolinensis
ENSMAMG00000017109	rnaseh2b	89	53.309	ENSANAG00000020662	RNASEH2B	87	53.309	Aotus_nancymaae
ENSMAMG00000017109	rnaseh2b	100	83.007	ENSACLG00000000467	rnaseh2b	100	83.007	Astatotilapia_calliptera
ENSMAMG00000017109	rnaseh2b	99	68.301	ENSAMXG00000014351	rnaseh2b	99	68.301	Astyanax_mexicanus
ENSMAMG00000017109	rnaseh2b	90	51.064	ENSBTAG00000020149	RNASEH2B	90	51.064	Bos_taurus
ENSMAMG00000017109	rnaseh2b	87	53.184	ENSCJAG00000008585	-	88	53.184	Callithrix_jacchus
ENSMAMG00000017109	rnaseh2b	72	48.585	ENSCJAG00000003822	-	79	48.585	Callithrix_jacchus
ENSMAMG00000017109	rnaseh2b	98	48.039	ENSCAFG00000004295	RNASEH2B	93	48.039	Canis_familiaris
ENSMAMG00000017109	rnaseh2b	87	52.239	ENSCAFG00020000250	RNASEH2B	88	52.239	Canis_lupus_dingo
ENSMAMG00000017109	rnaseh2b	87	53.160	ENSCHIG00000018220	RNASEH2B	87	53.160	Capra_hircus
ENSMAMG00000017109	rnaseh2b	75	49.138	ENSCHIG00000012982	-	82	49.138	Capra_hircus
ENSMAMG00000017109	rnaseh2b	87	45.113	ENSTSYG00000031177	-	86	45.113	Carlito_syrichta
ENSMAMG00000017109	rnaseh2b	87	52.612	ENSTSYG00000009176	-	87	52.612	Carlito_syrichta
ENSMAMG00000017109	rnaseh2b	87	44.776	ENSCAPG00000009978	RNASEH2B	91	44.776	Cavia_aperea
ENSMAMG00000017109	rnaseh2b	87	49.814	ENSCPOG00000032527	RNASEH2B	86	49.814	Cavia_porcellus
ENSMAMG00000017109	rnaseh2b	87	53.731	ENSCCAG00000026979	RNASEH2B	88	53.558	Cebus_capucinus
ENSMAMG00000017109	rnaseh2b	85	54.023	ENSCATG00000031336	RNASEH2B	74	54.023	Cercocebus_atys
ENSMAMG00000017109	rnaseh2b	87	53.731	ENSCLAG00000003517	RNASEH2B	74	53.731	Chinchilla_lanigera
ENSMAMG00000017109	rnaseh2b	86	53.008	ENSCSAG00000017701	RNASEH2B	81	53.008	Chlorocebus_sabaeus
ENSMAMG00000017109	rnaseh2b	88	43.066	ENSCHOG00000013688	RNASEH2B	89	44.161	Choloepus_hoffmanni
ENSMAMG00000017109	rnaseh2b	99	59.740	ENSCPBG00000008684	RNASEH2B	95	59.740	Chrysemys_picta_bellii
ENSMAMG00000017109	rnaseh2b	90	35.689	ENSCING00000016454	-	92	35.689	Ciona_intestinalis
ENSMAMG00000017109	rnaseh2b	87	53.137	ENSCANG00000041511	-	87	53.137	Colobus_angolensis_palliatus
ENSMAMG00000017109	rnaseh2b	87	52.985	ENSCGRG00001000611	Rnaseh2b	88	52.941	Cricetulus_griseus_chok1gshd
ENSMAMG00000017109	rnaseh2b	87	52.985	ENSCGRG00000006077	Rnaseh2b	88	52.941	Cricetulus_griseus_crigri
ENSMAMG00000017109	rnaseh2b	100	83.333	ENSCSEG00000004910	rnaseh2b	100	83.333	Cynoglossus_semilaevis
ENSMAMG00000017109	rnaseh2b	100	80.392	ENSCVAG00000005212	rnaseh2b	100	80.392	Cyprinodon_variegatus
ENSMAMG00000017109	rnaseh2b	99	71.242	ENSDARG00000005128	rnaseh2b	99	71.242	Danio_rerio
ENSMAMG00000017109	rnaseh2b	87	49.814	ENSDNOG00000049666	-	87	49.814	Dasypus_novemcinctus
ENSMAMG00000017109	rnaseh2b	87	47.191	ENSDNOG00000034290	-	86	47.191	Dasypus_novemcinctus
ENSMAMG00000017109	rnaseh2b	87	52.985	ENSDORG00000010708	Rnaseh2b	86	52.985	Dipodomys_ordii
ENSMAMG00000017109	rnaseh2b	83	39.062	ENSEBUG00000005965	rnaseh2b	97	39.062	Eptatretus_burgeri
ENSMAMG00000017109	rnaseh2b	87	53.731	ENSEASG00005017323	RNASEH2B	86	53.731	Equus_asinus_asinus
ENSMAMG00000017109	rnaseh2b	87	53.731	ENSECAG00000014262	RNASEH2B	86	53.731	Equus_caballus
ENSMAMG00000017109	rnaseh2b	100	74.919	ENSELUG00000019560	rnaseh2b	100	74.919	Esox_lucius
ENSMAMG00000017109	rnaseh2b	85	51.341	ENSFCAG00000014257	RNASEH2B	82	51.341	Felis_catus
ENSMAMG00000017109	rnaseh2b	91	62.500	ENSFALG00000008435	RNASEH2B	95	62.500	Ficedula_albicollis
ENSMAMG00000017109	rnaseh2b	87	51.493	ENSFDAG00000009920	RNASEH2B	93	51.493	Fukomys_damarensis
ENSMAMG00000017109	rnaseh2b	100	84.314	ENSFHEG00000012160	rnaseh2b	100	84.314	Fundulus_heteroclitus
ENSMAMG00000017109	rnaseh2b	100	69.231	ENSGMOG00000016830	rnaseh2b	100	69.231	Gadus_morhua
ENSMAMG00000017109	rnaseh2b	95	58.503	ENSGALG00000017015	RNASEH2B	100	58.900	Gallus_gallus
ENSMAMG00000017109	rnaseh2b	100	83.333	ENSGAFG00000021222	rnaseh2b	100	83.333	Gambusia_affinis
ENSMAMG00000017109	rnaseh2b	100	80.769	ENSGACG00000002821	rnaseh2b	100	80.769	Gasterosteus_aculeatus
ENSMAMG00000017109	rnaseh2b	90	63.538	ENSGAGG00000014722	RNASEH2B	99	63.538	Gopherus_agassizii
ENSMAMG00000017109	rnaseh2b	87	53.506	ENSGGOG00000001044	RNASEH2B	87	53.506	Gorilla_gorilla
ENSMAMG00000017109	rnaseh2b	100	83.660	ENSHBUG00000006049	rnaseh2b	100	83.660	Haplochromis_burtoni
ENSMAMG00000017109	rnaseh2b	87	51.866	ENSHGLG00100015953	RNASEH2B	91	51.866	Heterocephalus_glaber_male
ENSMAMG00000017109	rnaseh2b	100	75.974	ENSHCOG00000003318	rnaseh2b	100	75.974	Hippocampus_comes
ENSMAMG00000017109	rnaseh2b	100	73.941	ENSIPUG00000023815	rnaseh2b	100	73.941	Ictalurus_punctatus
ENSMAMG00000017109	rnaseh2b	87	53.008	ENSSTOG00000015126	RNASEH2B	91	53.008	Ictidomys_tridecemlineatus
ENSMAMG00000017109	rnaseh2b	87	53.759	ENSJJAG00000013335	Rnaseh2b	90	53.759	Jaculus_jaculus
ENSMAMG00000017109	rnaseh2b	100	83.660	ENSKMAG00000002198	rnaseh2b	100	83.660	Kryptolebias_marmoratus
ENSMAMG00000017109	rnaseh2b	100	86.275	ENSLBEG00000019331	rnaseh2b	100	86.275	Labrus_bergylta
ENSMAMG00000017109	rnaseh2b	68	62.264	ENSLACG00000010782	RNASEH2B	92	62.281	Latimeria_chalumnae
ENSMAMG00000017109	rnaseh2b	100	69.381	ENSLOCG00000009296	rnaseh2b	100	69.381	Lepisosteus_oculatus
ENSMAMG00000017109	rnaseh2b	87	51.119	ENSLAFG00000030158	RNASEH2B	87	51.119	Loxodonta_africana
ENSMAMG00000017109	rnaseh2b	87	53.731	ENSMFAG00000038464	-	86	53.731	Macaca_fascicularis
ENSMAMG00000017109	rnaseh2b	87	49.254	ENSMMUG00000021746	RNASEH2B	85	49.254	Macaca_mulatta
ENSMAMG00000017109	rnaseh2b	87	53.731	ENSMNEG00000030580	RNASEH2B	86	53.731	Macaca_nemestrina
ENSMAMG00000017109	rnaseh2b	87	53.137	ENSMLEG00000043911	-	87	53.137	Mandrillus_leucophaeus
ENSMAMG00000017109	rnaseh2b	100	78.758	ENSMZEG00005021926	rnaseh2b	100	79.085	Maylandia_zebra
ENSMAMG00000017109	rnaseh2b	86	62.030	ENSMGAG00000015025	RNASEH2B	98	62.278	Meleagris_gallopavo
ENSMAMG00000017109	rnaseh2b	87	52.239	ENSMAUG00000016520	Rnaseh2b	88	52.206	Mesocricetus_auratus
ENSMAMG00000017109	rnaseh2b	89	52.206	ENSMICG00000000528	RNASEH2B	90	51.264	Microcebus_murinus
ENSMAMG00000017109	rnaseh2b	99	82.295	ENSMMOG00000019799	rnaseh2b	100	87.063	Mola_mola
ENSMAMG00000017109	rnaseh2b	98	56.766	ENSMODG00000010775	RNASEH2B	99	56.766	Monodelphis_domestica
ENSMAMG00000017109	rnaseh2b	99	88.852	ENSMALG00000004463	rnaseh2b	100	88.852	Monopterus_albus
ENSMAMG00000017109	rnaseh2b	72	54.955	MGP_CAROLIEiJ_G0019389	Rnaseh2b	81	56.306	Mus_caroli
ENSMAMG00000017109	rnaseh2b	87	53.731	ENSMUSG00000021932	Rnaseh2b	87	53.731	Mus_musculus
ENSMAMG00000017109	rnaseh2b	89	41.905	MGP_PahariEiJ_G0030407	-	90	41.905	Mus_pahari
ENSMAMG00000017109	rnaseh2b	71	48.804	ENSMPUG00000018010	RNASEH2B	87	48.804	Mustela_putorius_furo
ENSMAMG00000017109	rnaseh2b	87	55.556	ENSMLUG00000004065	-	86	55.556	Myotis_lucifugus
ENSMAMG00000017109	rnaseh2b	100	82.353	ENSNBRG00000003253	rnaseh2b	100	82.353	Neolamprologus_brichardi
ENSMAMG00000017109	rnaseh2b	99	49.186	ENSNLEG00000003804	RNASEH2B	98	49.186	Nomascus_leucogenys
ENSMAMG00000017109	rnaseh2b	93	56.747	ENSMEUG00000003665	RNASEH2B	99	56.747	Notamacropus_eugenii
ENSMAMG00000017109	rnaseh2b	53	51.235	ENSOPRG00000003695	-	51	53.086	Ochotona_princeps
ENSMAMG00000017109	rnaseh2b	87	52.612	ENSODEG00000006793	-	87	52.612	Octodon_degus
ENSMAMG00000017109	rnaseh2b	71	49.761	ENSODEG00000005412	-	86	49.524	Octodon_degus
ENSMAMG00000017109	rnaseh2b	100	83.660	ENSONIG00000006657	rnaseh2b	100	83.660	Oreochromis_niloticus
ENSMAMG00000017109	rnaseh2b	89	58.929	ENSOANG00000015537	RNASEH2B	96	58.929	Ornithorhynchus_anatinus
ENSMAMG00000017109	rnaseh2b	94	48.110	ENSOCUG00000008904	RNASEH2B	91	49.141	Oryctolagus_cuniculus
ENSMAMG00000017109	rnaseh2b	99	78.808	ENSORLG00000011850	rnaseh2b	100	78.808	Oryzias_latipes
ENSMAMG00000017109	rnaseh2b	99	79.139	ENSORLG00020012081	rnaseh2b	100	79.139	Oryzias_latipes_hni
ENSMAMG00000017109	rnaseh2b	99	78.477	ENSORLG00015015468	rnaseh2b	100	78.477	Oryzias_latipes_hsok
ENSMAMG00000017109	rnaseh2b	99	80.795	ENSOMEG00000012441	rnaseh2b	100	80.795	Oryzias_melastigma
ENSMAMG00000017109	rnaseh2b	87	52.030	ENSOGAG00000016486	RNASEH2B	91	52.030	Otolemur_garnettii
ENSMAMG00000017109	rnaseh2b	89	52.899	ENSOARG00000008701	RNASEH2B	90	53.160	Ovis_aries
ENSMAMG00000017109	rnaseh2b	87	53.506	ENSPPAG00000026374	RNASEH2B	93	50.472	Pan_paniscus
ENSMAMG00000017109	rnaseh2b	87	50.735	ENSPPRG00000012450	RNASEH2B	89	50.735	Panthera_pardus
ENSMAMG00000017109	rnaseh2b	87	51.103	ENSPTIG00000013918	RNASEH2B	97	51.103	Panthera_tigris_altaica
ENSMAMG00000017109	rnaseh2b	87	53.506	ENSPTRG00000005886	RNASEH2B	95	55.823	Pan_troglodytes
ENSMAMG00000017109	rnaseh2b	87	53.137	ENSPANG00000022424	-	87	53.137	Papio_anubis
ENSMAMG00000017109	rnaseh2b	100	70.684	ENSPKIG00000013386	rnaseh2b	100	70.684	Paramormyrops_kingsleyae
ENSMAMG00000017109	rnaseh2b	63	57.143	ENSPSIG00000002224	RNASEH2B	88	57.143	Pelodiscus_sinensis
ENSMAMG00000017109	rnaseh2b	65	79.293	ENSPMGG00000010299	rnaseh2b	96	79.293	Periophthalmus_magnuspinnatus
ENSMAMG00000017109	rnaseh2b	87	52.985	ENSPEMG00000019721	Rnaseh2b	87	53.333	Peromyscus_maniculatus_bairdii
ENSMAMG00000017109	rnaseh2b	94	55.714	ENSPCIG00000014535	-	94	55.714	Phascolarctos_cinereus
ENSMAMG00000017109	rnaseh2b	100	83.442	ENSPFOG00000016722	rnaseh2b	100	83.442	Poecilia_formosa
ENSMAMG00000017109	rnaseh2b	100	83.660	ENSPLAG00000011755	rnaseh2b	100	83.660	Poecilia_latipinna
ENSMAMG00000017109	rnaseh2b	100	83.987	ENSPMEG00000002721	rnaseh2b	100	83.987	Poecilia_mexicana
ENSMAMG00000017109	rnaseh2b	100	83.333	ENSPREG00000007737	rnaseh2b	100	83.333	Poecilia_reticulata
ENSMAMG00000017109	rnaseh2b	87	53.506	ENSPPYG00000005378	RNASEH2B	86	53.506	Pongo_abelii
ENSMAMG00000017109	rnaseh2b	89	52.747	ENSPCOG00000026623	RNASEH2B	90	51.799	Propithecus_coquereli
ENSMAMG00000017109	rnaseh2b	78	51.915	ENSPVAG00000000508	RNASEH2B	88	51.915	Pteropus_vampyrus
ENSMAMG00000017109	rnaseh2b	100	83.333	ENSPNYG00000013552	rnaseh2b	100	83.333	Pundamilia_nyererei
ENSMAMG00000017109	rnaseh2b	99	68.954	ENSPNAG00000024825	rnaseh2b	99	68.954	Pygocentrus_nattereri
ENSMAMG00000017109	rnaseh2b	87	51.866	ENSRNOG00000009192	Rnaseh2b	87	51.866	Rattus_norvegicus
ENSMAMG00000017109	rnaseh2b	86	47.348	ENSRBIG00000036017	-	86	47.348	Rhinopithecus_bieti
ENSMAMG00000017109	rnaseh2b	87	53.358	ENSRBIG00000028928	-	86	53.358	Rhinopithecus_bieti
ENSMAMG00000017109	rnaseh2b	87	53.358	ENSRROG00000018808	-	87	52.768	Rhinopithecus_roxellana
ENSMAMG00000017109	rnaseh2b	71	43.333	ENSRROG00000044915	-	79	43.333	Rhinopithecus_roxellana
ENSMAMG00000017109	rnaseh2b	87	53.731	ENSSBOG00000008081	RNASEH2B	96	53.731	Saimiri_boliviensis_boliviensis
ENSMAMG00000017109	rnaseh2b	100	56.774	ENSSHAG00000016190	RNASEH2B	100	57.468	Sarcophilus_harrisii
ENSMAMG00000017109	rnaseh2b	99	71.895	ENSSFOG00015010190	rnaseh2b	100	71.895	Scleropages_formosus
ENSMAMG00000017109	rnaseh2b	100	86.275	ENSSMAG00000001546	rnaseh2b	100	86.275	Scophthalmus_maximus
ENSMAMG00000017109	rnaseh2b	100	90.196	ENSSDUG00000007567	rnaseh2b	100	90.196	Seriola_dumerili
ENSMAMG00000017109	rnaseh2b	100	87.296	ENSSLDG00000012485	rnaseh2b	100	87.296	Seriola_lalandi_dorsalis
ENSMAMG00000017109	rnaseh2b	85	55.172	ENSSPUG00000006745	-	94	55.172	Sphenodon_punctatus
ENSMAMG00000017109	rnaseh2b	100	89.869	ENSSPAG00000020926	rnaseh2b	100	89.869	Stegastes_partitus
ENSMAMG00000017109	rnaseh2b	87	52.416	ENSSSCG00000024385	RNASEH2B	96	54.656	Sus_scrofa
ENSMAMG00000017109	rnaseh2b	88	64.338	ENSTGUG00000012104	RNASEH2B	99	64.338	Taeniopygia_guttata
ENSMAMG00000017109	rnaseh2b	100	83.987	ENSTRUG00000015098	rnaseh2b	100	83.987	Takifugu_rubripes
ENSMAMG00000017109	rnaseh2b	100	80.844	ENSTNIG00000013861	rnaseh2b	100	80.844	Tetraodon_nigroviridis
ENSMAMG00000017109	rnaseh2b	87	46.097	ENSTTRG00000010761	RNASEH2B	87	46.840	Tursiops_truncatus
ENSMAMG00000017109	rnaseh2b	87	53.358	ENSUAMG00000022849	RNASEH2B	96	53.358	Ursus_americanus
ENSMAMG00000017109	rnaseh2b	87	52.612	ENSUMAG00000018556	RNASEH2B	96	52.612	Ursus_maritimus
ENSMAMG00000017109	rnaseh2b	87	54.307	ENSVPAG00000005679	RNASEH2B	92	54.307	Vicugna_pacos
ENSMAMG00000017109	rnaseh2b	87	52.612	ENSVVUG00000024015	RNASEH2B	80	53.358	Vulpes_vulpes
ENSMAMG00000017109	rnaseh2b	99	56.494	ENSXETG00000020720	rnaseh2b	100	56.494	Xenopus_tropicalis
ENSMAMG00000017109	rnaseh2b	100	81.107	ENSXCOG00000018732	rnaseh2b	100	81.107	Xiphophorus_couchianus
ENSMAMG00000017109	rnaseh2b	100	82.680	ENSXMAG00000022554	rnaseh2b	100	82.680	Xiphophorus_maculatus