EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000017161 (Gene tree)
Gene ID: 113145318
Gene Symbol: srsf6a
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: serine/arginine-rich splicing factor 6a
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 3621 bases
Position: chrOOHQ01000094.1:25170403-25174023
Accession: ZDB-GENE-040426-2824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000025571	RRM_1	PF00076.22	5e-32	1	2
ENSMAMP00000025571	RRM_1	PF00076.22	5e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000026226	-	1050	-	ENSMAMP00000025571	349 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000017161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000017161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000017161	srsf6a	57	38.462	ENSMAMG00000011581	srsf9	78	39.234
ENSMAMG00000017161	srsf6a	52	63.889	ENSMAMG00000002673	srsf5b	61	63.889
ENSMAMG00000017161	srsf6a	76	59.848	ENSMAMG00000004888	srsf4	68	74.468
ENSMAMG00000017161	srsf6a	57	39.713	ENSMAMG00000019687	-	78	37.864
ENSMAMG00000017161	srsf6a	52	64.641	ENSMAMG00000000192	srsf5a	64	65.193

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000017161	srsf6a	53	87.634	ENSG00000124193	SRSF6	98	61.871	Homo_sapiens
ENSMAMG00000017161	srsf6a	53	70.588	ENSAMEG00000003710	SRSF6	53	71.505	Ailuropoda_melanoleuca
ENSMAMG00000017161	srsf6a	71	77.600	ENSACIG00000020091	-	95	83.721	Amphilophus_citrinellus
ENSMAMG00000017161	srsf6a	55	82.143	ENSAPEG00000020746	-	65	83.158	Amphiprion_percula
ENSMAMG00000017161	srsf6a	94	85.933	ENSAPEG00000013086	-	53	98.378	Amphiprion_percula
ENSMAMG00000017161	srsf6a	53	85.326	ENSATEG00000007255	-	71	82.065	Anabas_testudineus
ENSMAMG00000017161	srsf6a	53	88.108	ENSACAG00000002061	SRSF6	52	88.108	Anolis_carolinensis
ENSMAMG00000017161	srsf6a	53	87.634	ENSANAG00000024080	SRSF6	98	61.871	Aotus_nancymaae
ENSMAMG00000017161	srsf6a	53	86.022	ENSAMXG00000042692	-	96	88.889	Astyanax_mexicanus
ENSMAMG00000017161	srsf6a	53	87.634	ENSBTAG00000008527	SRSF6	98	62.590	Bos_taurus
ENSMAMG00000017161	srsf6a	68	75.000	ENSCJAG00000048403	SRSF6	98	61.871	Callithrix_jacchus
ENSMAMG00000017161	srsf6a	53	87.634	ENSCAFG00000009289	SRSF6	98	62.590	Canis_familiaris
ENSMAMG00000017161	srsf6a	53	87.634	ENSCAFG00020013559	SRSF6	98	62.590	Canis_lupus_dingo
ENSMAMG00000017161	srsf6a	53	87.634	ENSCHIG00000015890	-	98	62.590	Capra_hircus
ENSMAMG00000017161	srsf6a	53	86.559	ENSCHIG00000009148	-	53	87.027	Capra_hircus
ENSMAMG00000017161	srsf6a	64	75.336	ENSCPOG00000011761	SRSF6	98	61.871	Cavia_porcellus
ENSMAMG00000017161	srsf6a	53	87.634	ENSCCAG00000026018	-	98	61.871	Cebus_capucinus
ENSMAMG00000017161	srsf6a	53	87.634	ENSCATG00000030794	SRSF6	98	61.871	Cercocebus_atys
ENSMAMG00000017161	srsf6a	53	87.634	ENSCLAG00000010247	SRSF6	98	61.871	Chinchilla_lanigera
ENSMAMG00000017161	srsf6a	53	87.634	ENSCSAG00000014022	SRSF6	53	88.108	Chlorocebus_sabaeus
ENSMAMG00000017161	srsf6a	53	87.166	ENSCPBG00000018200	SRSF6	54	89.247	Chrysemys_picta_bellii
ENSMAMG00000017161	srsf6a	53	86.559	ENSCANG00000037774	-	53	87.027	Colobus_angolensis_palliatus
ENSMAMG00000017161	srsf6a	53	87.634	ENSCGRG00001022339	Srsf6	98	61.871	Cricetulus_griseus_chok1gshd
ENSMAMG00000017161	srsf6a	53	89.305	ENSDARG00000016783	srsf6b	82	96.154	Danio_rerio
ENSMAMG00000017161	srsf6a	53	87.634	ENSDNOG00000008410	SRSF6	53	88.108	Dasypus_novemcinctus
ENSMAMG00000017161	srsf6a	53	87.634	ENSDORG00000028378	Srsf6	98	61.871	Dipodomys_ordii
ENSMAMG00000017161	srsf6a	53	83.871	ENSETEG00000006221	SRSF6	53	84.324	Echinops_telfairi
ENSMAMG00000017161	srsf6a	53	87.634	ENSEASG00005023429	SRSF6	53	88.108	Equus_asinus_asinus
ENSMAMG00000017161	srsf6a	64	77.578	ENSECAG00000023932	SRSF6	56	88.108	Equus_caballus
ENSMAMG00000017161	srsf6a	94	77.982	ENSELUG00000013506	SRSF6	84	89.674	Esox_lucius
ENSMAMG00000017161	srsf6a	53	87.634	ENSFCAG00000032814	SRSF6	53	88.108	Felis_catus
ENSMAMG00000017161	srsf6a	94	82.121	ENSFHEG00000023065	srsf6a	54	95.135	Fundulus_heteroclitus
ENSMAMG00000017161	srsf6a	52	85.792	ENSGMOG00000014458	srsf6a	93	69.540	Gadus_morhua
ENSMAMG00000017161	srsf6a	52	74.586	ENSGMOG00000006105	srsf6a	62	73.481	Gadus_morhua
ENSMAMG00000017161	srsf6a	53	87.701	ENSGALG00000000990	SRSF6	98	59.441	Gallus_gallus
ENSMAMG00000017161	srsf6a	93	77.874	ENSGACG00000006084	srsf6a	62	88.649	Gasterosteus_aculeatus
ENSMAMG00000017161	srsf6a	53	87.166	ENSGAGG00000003238	SRSF6	54	89.247	Gopherus_agassizii
ENSMAMG00000017161	srsf6a	53	87.634	ENSGGOG00000009808	SRSF6	98	61.871	Gorilla_gorilla
ENSMAMG00000017161	srsf6a	63	76.923	ENSHBUG00000006386	-	97	62.824	Haplochromis_burtoni
ENSMAMG00000017161	srsf6a	55	68.718	ENSHGLG00000007701	-	57	67.568	Heterocephalus_glaber_female
ENSMAMG00000017161	srsf6a	53	87.634	ENSHGLG00000007348	SRSF6	98	61.871	Heterocephalus_glaber_female
ENSMAMG00000017161	srsf6a	91	68.652	ENSHCOG00000002740	srsf6a	57	87.027	Hippocampus_comes
ENSMAMG00000017161	srsf6a	53	87.634	ENSSTOG00000010866	SRSF6	98	61.871	Ictidomys_tridecemlineatus
ENSMAMG00000017161	srsf6a	94	77.064	ENSKMAG00000011934	srsf6a	59	89.189	Kryptolebias_marmoratus
ENSMAMG00000017161	srsf6a	92	77.313	ENSLBEG00000007356	srsf6a	51	94.565	Labrus_bergylta
ENSMAMG00000017161	srsf6a	91	70.219	ENSLACG00000005466	SRSF6	54	88.108	Latimeria_chalumnae
ENSMAMG00000017161	srsf6a	53	87.634	ENSMFAG00000036925	SRSF6	98	61.871	Macaca_fascicularis
ENSMAMG00000017161	srsf6a	53	87.634	ENSMMUG00000006742	SRSF6	98	61.871	Macaca_mulatta
ENSMAMG00000017161	srsf6a	53	87.097	ENSMNEG00000038270	-	53	87.568	Macaca_nemestrina
ENSMAMG00000017161	srsf6a	53	87.097	ENSMNEG00000027392	-	98	61.151	Macaca_nemestrina
ENSMAMG00000017161	srsf6a	62	74.312	ENSMZEG00005020658	-	60	86.885	Maylandia_zebra
ENSMAMG00000017161	srsf6a	53	87.097	ENSMICG00000008537	SRSF6	98	61.871	Microcebus_murinus
ENSMAMG00000017161	srsf6a	53	86.559	ENSMODG00000003107	SRSF6	54	88.108	Monodelphis_domestica
ENSMAMG00000017161	srsf6a	100	76.010	ENSMALG00000003702	srsf6a	100	76.010	Monopterus_albus
ENSMAMG00000017161	srsf6a	53	87.634	MGP_CAROLIEiJ_G0024606	Srsf6	98	61.871	Mus_caroli
ENSMAMG00000017161	srsf6a	53	87.634	ENSMUSG00000016921	Srsf6	98	61.871	Mus_musculus
ENSMAMG00000017161	srsf6a	53	87.634	MGP_PahariEiJ_G0026050	Srsf6	98	61.871	Mus_pahari
ENSMAMG00000017161	srsf6a	53	87.634	MGP_SPRETEiJ_G0025528	Srsf6	98	61.871	Mus_spretus
ENSMAMG00000017161	srsf6a	53	87.634	ENSMPUG00000017692	SRSF6	64	88.108	Mustela_putorius_furo
ENSMAMG00000017161	srsf6a	53	59.155	ENSMLUG00000016618	SRSF6	53	57.820	Myotis_lucifugus
ENSMAMG00000017161	srsf6a	53	87.634	ENSNGAG00000017560	Srsf6	98	61.871	Nannospalax_galili
ENSMAMG00000017161	srsf6a	53	85.946	ENSNBRG00000014709	-	97	63.112	Neolamprologus_brichardi
ENSMAMG00000017161	srsf6a	52	98.907	ENSNBRG00000001846	-	52	98.919	Neolamprologus_brichardi
ENSMAMG00000017161	srsf6a	53	87.634	ENSNLEG00000006524	SRSF6	98	61.871	Nomascus_leucogenys
ENSMAMG00000017161	srsf6a	67	74.043	ENSMEUG00000014615	SRSF6	61	88.108	Notamacropus_eugenii
ENSMAMG00000017161	srsf6a	53	69.231	ENSOCUG00000009785	-	63	68.750	Oryctolagus_cuniculus
ENSMAMG00000017161	srsf6a	52	52.198	ENSOCUG00000023999	-	70	52.486	Oryctolagus_cuniculus
ENSMAMG00000017161	srsf6a	75	80.000	ENSORLG00000003530	srsf6a	92	57.674	Oryzias_latipes
ENSMAMG00000017161	srsf6a	75	80.000	ENSORLG00015009410	srsf6a	92	57.674	Oryzias_latipes_hsok
ENSMAMG00000017161	srsf6a	53	87.097	ENSOGAG00000014468	SRSF6	53	87.568	Otolemur_garnettii
ENSMAMG00000017161	srsf6a	53	80.729	ENSOARG00000003117	SRSF6	53	84.324	Ovis_aries
ENSMAMG00000017161	srsf6a	53	87.097	ENSPPAG00000034327	-	53	87.568	Pan_paniscus
ENSMAMG00000017161	srsf6a	64	65.022	ENSPPAG00000043131	-	57	72.487	Pan_paniscus
ENSMAMG00000017161	srsf6a	53	87.634	ENSPPRG00000008917	SRSF6	53	88.108	Panthera_pardus
ENSMAMG00000017161	srsf6a	53	87.634	ENSPTRG00000044686	-	98	61.871	Pan_troglodytes
ENSMAMG00000017161	srsf6a	64	65.022	ENSPTRG00000046274	-	57	72.487	Pan_troglodytes
ENSMAMG00000017161	srsf6a	53	87.634	ENSPANG00000035224	SRSF6	98	61.871	Papio_anubis
ENSMAMG00000017161	srsf6a	52	73.370	ENSPKIG00000015703	-	95	60.927	Paramormyrops_kingsleyae
ENSMAMG00000017161	srsf6a	94	76.923	ENSPKIG00000018463	-	85	88.108	Paramormyrops_kingsleyae
ENSMAMG00000017161	srsf6a	94	78.899	ENSPMGG00000014963	srsf6a	55	97.838	Periophthalmus_magnuspinnatus
ENSMAMG00000017161	srsf6a	53	86.559	ENSPCIG00000003820	SRSF6	98	61.871	Phascolarctos_cinereus
ENSMAMG00000017161	srsf6a	73	94.828	ENSPFOG00000006437	srsf6a	93	85.882	Poecilia_formosa
ENSMAMG00000017161	srsf6a	94	81.361	ENSPLAG00000009243	srsf6a	79	96.032	Poecilia_latipinna
ENSMAMG00000017161	srsf6a	94	83.784	ENSPMEG00000006042	SRSF6	53	96.757	Poecilia_mexicana
ENSMAMG00000017161	srsf6a	53	87.634	ENSPPYG00000011019	SRSF6	53	88.108	Pongo_abelii
ENSMAMG00000017161	srsf6a	53	86.022	ENSPCAG00000010954	SRSF6	55	86.486	Procavia_capensis
ENSMAMG00000017161	srsf6a	53	87.097	ENSPCOG00000026364	SRSF6	98	61.871	Propithecus_coquereli
ENSMAMG00000017161	srsf6a	53	87.097	ENSPVAG00000015232	SRSF6	53	88.043	Pteropus_vampyrus
ENSMAMG00000017161	srsf6a	53	85.946	ENSPNYG00000004944	-	97	63.112	Pundamilia_nyererei
ENSMAMG00000017161	srsf6a	93	91.411	ENSPNYG00000011272	-	89	91.411	Pundamilia_nyererei
ENSMAMG00000017161	srsf6a	53	87.634	ENSRNOG00000006380	Srsf6	54	88.108	Rattus_norvegicus
ENSMAMG00000017161	srsf6a	53	86.559	ENSRBIG00000041414	SRSF6	98	60.432	Rhinopithecus_bieti
ENSMAMG00000017161	srsf6a	53	87.634	ENSRROG00000029989	SRSF6	98	61.871	Rhinopithecus_roxellana
ENSMAMG00000017161	srsf6a	53	87.634	ENSSBOG00000033708	-	98	61.871	Saimiri_boliviensis_boliviensis
ENSMAMG00000017161	srsf6a	52	71.739	ENSSBOG00000034078	-	54	69.945	Saimiri_boliviensis_boliviensis
ENSMAMG00000017161	srsf6a	53	86.559	ENSSHAG00000012805	SRSF6	54	88.108	Sarcophilus_harrisii
ENSMAMG00000017161	srsf6a	68	78.243	ENSSFOG00015015169	SRSF6	59	92.973	Scleropages_formosus
ENSMAMG00000017161	srsf6a	94	72.254	ENSSFOG00015019681	-	53	86.528	Scleropages_formosus
ENSMAMG00000017161	srsf6a	53	82.065	ENSSMAG00000017447	-	55	82.609	Scophthalmus_maximus
ENSMAMG00000017161	srsf6a	100	96.562	ENSSDUG00000016097	srsf6a	100	96.562	Seriola_dumerili
ENSMAMG00000017161	srsf6a	94	97.248	ENSSLDG00000022841	srsf6a	94	97.239	Seriola_lalandi_dorsalis
ENSMAMG00000017161	srsf6a	53	89.189	ENSSPUG00000004967	SRSF6	98	59.441	Sphenodon_punctatus
ENSMAMG00000017161	srsf6a	86	94.444	ENSSPAG00000002362	srsf6a	86	97.872	Stegastes_partitus
ENSMAMG00000017161	srsf6a	53	87.634	ENSSSCG00000007362	SRSF6	61	88.108	Sus_scrofa
ENSMAMG00000017161	srsf6a	53	88.108	ENSTGUG00000003455	SRSF6	53	88.649	Taeniopygia_guttata
ENSMAMG00000017161	srsf6a	100	77.937	ENSTNIG00000001692	srsf6a	88	94.595	Tetraodon_nigroviridis
ENSMAMG00000017161	srsf6a	53	87.634	ENSUAMG00000003559	SRSF6	98	62.590	Ursus_americanus
ENSMAMG00000017161	srsf6a	94	81.381	ENSXMAG00000021849	srsf6a	55	94.595	Xiphophorus_maculatus