EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000017176 (Gene tree)
Gene ID: 113123454
Gene Symbol: cmss1
Alias: zgc:101814
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 25968 bases
Position: chrOOHQ01000093.1:18186379-18212346
Accession: 113123454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000025575	CMS1	PF14617.6	2e-29	1	1
ENSMAMP00000025575	DEAD	PF00270.29	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000026230	-	1574	-	ENSMAMP00000025575	290 (aa)	XP_026151329	UPI000E45EB7E

Gene Model

Click here to download ENSMAMG00000017176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000017176's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000017176	cmss1	100	52.759	ENSG00000184220	CMSS1	98	63.750	Homo_sapiens
ENSMAMG00000017176	cmss1	70	90.148	ENSAPOG00000010604	cmss1	99	76.667	Acanthochromis_polyacanthus
ENSMAMG00000017176	cmss1	88	56.471	ENSAMEG00000004092	CMSS1	78	63.054	Ailuropoda_melanoleuca
ENSMAMG00000017176	cmss1	91	73.384	ENSACIG00000021854	cmss1	99	73.384	Amphilophus_citrinellus
ENSMAMG00000017176	cmss1	100	78.276	ENSAOCG00000013361	cmss1	100	80.690	Amphiprion_ocellaris
ENSMAMG00000017176	cmss1	100	80.690	ENSAPEG00000005829	cmss1	100	80.690	Amphiprion_percula
ENSMAMG00000017176	cmss1	100	77.241	ENSATEG00000008209	cmss1	100	79.795	Anabas_testudineus
ENSMAMG00000017176	cmss1	70	63.366	ENSAPLG00000010542	CMSS1	88	63.366	Anas_platyrhynchos
ENSMAMG00000017176	cmss1	88	56.863	ENSACAG00000011065	CMSS1	74	62.871	Anolis_carolinensis
ENSMAMG00000017176	cmss1	100	52.041	ENSANAG00000023565	CMSS1	100	50.671	Aotus_nancymaae
ENSMAMG00000017176	cmss1	100	79.038	ENSACLG00000027294	cmss1	100	79.381	Astatotilapia_calliptera
ENSMAMG00000017176	cmss1	100	62.925	ENSAMXG00000002046	cmss1	100	62.925	Astyanax_mexicanus
ENSMAMG00000017176	cmss1	100	54.138	ENSBTAG00000013663	CMSS1	100	52.843	Bos_taurus
ENSMAMG00000017176	cmss1	100	53.242	ENSCJAG00000000610	CMSS1	100	52.203	Callithrix_jacchus
ENSMAMG00000017176	cmss1	83	58.506	ENSCAFG00000009230	CMSS1	73	64.356	Canis_familiaris
ENSMAMG00000017176	cmss1	83	58.506	ENSCAFG00020009464	-	74	64.356	Canis_lupus_dingo
ENSMAMG00000017176	cmss1	70	61.881	ENSCAFG00020024156	-	63	61.881	Canis_lupus_dingo
ENSMAMG00000017176	cmss1	81	59.322	ENSCHIG00000013003	CMSS1	82	60.435	Capra_hircus
ENSMAMG00000017176	cmss1	81	58.475	ENSTSYG00000009266	CMSS1	87	60.000	Carlito_syrichta
ENSMAMG00000017176	cmss1	72	52.381	ENSCAPG00000013584	CMSS1	88	55.556	Cavia_aperea
ENSMAMG00000017176	cmss1	100	54.138	ENSCPOG00000014680	CMSS1	100	53.401	Cavia_porcellus
ENSMAMG00000017176	cmss1	100	53.082	ENSCCAG00000034685	CMSS1	100	52.349	Cebus_capucinus
ENSMAMG00000017176	cmss1	100	52.560	ENSCATG00000031980	CMSS1	100	53.103	Cercocebus_atys
ENSMAMG00000017176	cmss1	69	62.000	ENSCLAG00000011241	CMSS1	87	62.376	Chinchilla_lanigera
ENSMAMG00000017176	cmss1	70	63.366	ENSCSAG00000006024	CMSS1	82	63.366	Chlorocebus_sabaeus
ENSMAMG00000017176	cmss1	100	41.497	ENSCHOG00000012098	CMSS1	100	40.816	Choloepus_hoffmanni
ENSMAMG00000017176	cmss1	67	44.388	ENSCING00000014848	-	99	44.385	Ciona_intestinalis
ENSMAMG00000017176	cmss1	100	52.560	ENSCANG00000031337	CMSS1	100	52.303	Colobus_angolensis_palliatus
ENSMAMG00000017176	cmss1	100	52.365	ENSCGRG00001014305	Cmss1	100	51.689	Cricetulus_griseus_chok1gshd
ENSMAMG00000017176	cmss1	79	58.079	ENSCGRG00000006722	Cmss1	88	58.079	Cricetulus_griseus_crigri
ENSMAMG00000017176	cmss1	100	72.635	ENSCSEG00000004958	cmss1	100	71.622	Cynoglossus_semilaevis
ENSMAMG00000017176	cmss1	100	74.570	ENSCVAG00000005039	cmss1	100	75.601	Cyprinodon_variegatus
ENSMAMG00000017176	cmss1	100	63.390	ENSDARG00000112579	cmss1	100	63.823	Danio_rerio
ENSMAMG00000017176	cmss1	70	63.861	ENSDNOG00000040418	CMSS1	73	63.861	Dasypus_novemcinctus
ENSMAMG00000017176	cmss1	100	53.425	ENSDORG00000010461	Cmss1	100	52.381	Dipodomys_ordii
ENSMAMG00000017176	cmss1	80	56.652	ENSEASG00005010966	CMSS1	92	61.881	Equus_asinus_asinus
ENSMAMG00000017176	cmss1	83	55.187	ENSECAG00000015662	CMSS1	89	61.386	Equus_caballus
ENSMAMG00000017176	cmss1	100	40.000	ENSEEUG00000007624	-	100	40.000	Erinaceus_europaeus
ENSMAMG00000017176	cmss1	100	60.927	ENSELUG00000019459	cmss1	100	61.056	Esox_lucius
ENSMAMG00000017176	cmss1	100	53.448	ENSFCAG00000044577	CMSS1	100	53.401	Felis_catus
ENSMAMG00000017176	cmss1	70	62.376	ENSFALG00000005816	CMSS1	85	62.376	Ficedula_albicollis
ENSMAMG00000017176	cmss1	70	64.356	ENSFDAG00000012577	CMSS1	89	64.356	Fukomys_damarensis
ENSMAMG00000017176	cmss1	80	81.034	ENSFHEG00000012008	cmss1	95	80.172	Fundulus_heteroclitus
ENSMAMG00000017176	cmss1	99	70.035	ENSGMOG00000016729	cmss1	100	69.338	Gadus_morhua
ENSMAMG00000017176	cmss1	95	53.091	ENSGALG00000015267	CMSS1	77	64.356	Gallus_gallus
ENSMAMG00000017176	cmss1	92	73.408	ENSGAFG00000021217	cmss1	100	73.408	Gambusia_affinis
ENSMAMG00000017176	cmss1	99	70.383	ENSGACG00000002798	cmss1	100	69.686	Gasterosteus_aculeatus
ENSMAMG00000017176	cmss1	70	63.861	ENSGAGG00000019861	CMSS1	79	63.861	Gopherus_agassizii
ENSMAMG00000017176	cmss1	83	57.676	ENSGGOG00000014125	CMSS1	77	62.871	Gorilla_gorilla
ENSMAMG00000017176	cmss1	100	78.351	ENSHBUG00000008431	cmss1	100	77.663	Haplochromis_burtoni
ENSMAMG00000017176	cmss1	79	60.870	ENSHGLG00000019481	CMSS1	93	60.870	Heterocephalus_glaber_female
ENSMAMG00000017176	cmss1	79	60.870	ENSHGLG00100010314	CMSS1	91	60.870	Heterocephalus_glaber_male
ENSMAMG00000017176	cmss1	100	69.932	ENSHCOG00000003222	cmss1	100	69.932	Hippocampus_comes
ENSMAMG00000017176	cmss1	100	66.323	ENSIPUG00000011591	cmss1	100	64.948	Ictalurus_punctatus
ENSMAMG00000017176	cmss1	100	53.103	ENSSTOG00000019366	CMSS1	100	52.365	Ictidomys_tridecemlineatus
ENSMAMG00000017176	cmss1	100	52.560	ENSJJAG00000014894	Cmss1	96	59.111	Jaculus_jaculus
ENSMAMG00000017176	cmss1	92	66.791	ENSKMAG00000002390	cmss1	100	64.925	Kryptolebias_marmoratus
ENSMAMG00000017176	cmss1	92	70.000	ENSLBEG00000006298	cmss1	83	82.843	Labrus_bergylta
ENSMAMG00000017176	cmss1	79	64.912	ENSLACG00000009293	CMSS1	88	68.317	Latimeria_chalumnae
ENSMAMG00000017176	cmss1	100	54.483	ENSLOCG00000009391	cmss1	100	53.846	Lepisosteus_oculatus
ENSMAMG00000017176	cmss1	69	63.000	ENSLAFG00000017509	CMSS1	99	59.565	Loxodonta_africana
ENSMAMG00000017176	cmss1	100	52.218	ENSMFAG00000045006	CMSS1	100	51.505	Macaca_fascicularis
ENSMAMG00000017176	cmss1	100	51.877	ENSMMUG00000002939	CMSS1	100	51.171	Macaca_mulatta
ENSMAMG00000017176	cmss1	100	52.218	ENSMNEG00000031315	CMSS1	100	51.505	Macaca_nemestrina
ENSMAMG00000017176	cmss1	100	52.218	ENSMLEG00000033660	CMSS1	100	51.505	Mandrillus_leucophaeus
ENSMAMG00000017176	cmss1	100	79.038	ENSMZEG00005021886	cmss1	100	79.381	Maylandia_zebra
ENSMAMG00000017176	cmss1	70	64.356	ENSMGAG00000014360	CMSS1	89	64.356	Meleagris_gallopavo
ENSMAMG00000017176	cmss1	100	40.203	ENSMAUG00000020609	Cmss1	100	39.865	Mesocricetus_auratus
ENSMAMG00000017176	cmss1	100	54.266	ENSMICG00000048977	CMSS1	100	53.041	Microcebus_murinus
ENSMAMG00000017176	cmss1	100	52.381	ENSMOCG00000021937	Cmss1	100	52.041	Microtus_ochrogaster
ENSMAMG00000017176	cmss1	88	71.373	ENSMMOG00000019794	cmss1	84	83.251	Mola_mola
ENSMAMG00000017176	cmss1	92	53.933	ENSMODG00000002275	CMSS1	76	63.861	Monodelphis_domestica
ENSMAMG00000017176	cmss1	100	82.877	ENSMALG00000004250	cmss1	100	82.192	Monopterus_albus
ENSMAMG00000017176	cmss1	100	52.414	MGP_CAROLIEiJ_G0020824	Cmss1	100	52.759	Mus_caroli
ENSMAMG00000017176	cmss1	100	51.724	ENSMUSG00000022748	Cmss1	100	52.069	Mus_musculus
ENSMAMG00000017176	cmss1	100	53.793	MGP_PahariEiJ_G0016524	Cmss1	100	52.218	Mus_pahari
ENSMAMG00000017176	cmss1	100	51.379	MGP_SPRETEiJ_G0021724	Cmss1	100	51.724	Mus_spretus
ENSMAMG00000017176	cmss1	81	58.298	ENSMPUG00000011324	CMSS1	87	59.389	Mustela_putorius_furo
ENSMAMG00000017176	cmss1	83	57.613	ENSMLUG00000001131	CMSS1	78	63.235	Myotis_lucifugus
ENSMAMG00000017176	cmss1	100	53.448	ENSNGAG00000020316	Cmss1	100	52.041	Nannospalax_galili
ENSMAMG00000017176	cmss1	100	79.038	ENSNBRG00000003095	cmss1	100	79.381	Neolamprologus_brichardi
ENSMAMG00000017176	cmss1	100	53.242	ENSNLEG00000034172	CMSS1	100	52.303	Nomascus_leucogenys
ENSMAMG00000017176	cmss1	79	51.316	ENSMEUG00000014505	CMSS1	89	53.960	Notamacropus_eugenii
ENSMAMG00000017176	cmss1	100	54.138	ENSOPRG00000002986	CMSS1	100	53.041	Ochotona_princeps
ENSMAMG00000017176	cmss1	100	44.483	ENSODEG00000009446	-	100	45.172	Octodon_degus
ENSMAMG00000017176	cmss1	100	48.621	ENSODEG00000001853	-	100	47.260	Octodon_degus
ENSMAMG00000017176	cmss1	100	54.949	ENSODEG00000005226	-	100	54.082	Octodon_degus
ENSMAMG00000017176	cmss1	100	51.724	ENSODEG00000003558	-	100	51.379	Octodon_degus
ENSMAMG00000017176	cmss1	89	81.467	ENSONIG00000006678	cmss1	100	80.843	Oreochromis_niloticus
ENSMAMG00000017176	cmss1	76	59.729	ENSOANG00000007529	CMSS1	87	62.376	Ornithorhynchus_anatinus
ENSMAMG00000017176	cmss1	81	59.746	ENSOCUG00000025366	CMSS1	73	63.366	Oryctolagus_cuniculus
ENSMAMG00000017176	cmss1	100	72.759	ENSORLG00000020340	cmss1	100	71.525	Oryzias_latipes
ENSMAMG00000017176	cmss1	76	72.273	ENSORLG00020012235	cmss1	86	75.369	Oryzias_latipes_hni
ENSMAMG00000017176	cmss1	93	64.103	ENSORLG00015015551	cmss1	76	74.877	Oryzias_latipes_hsok
ENSMAMG00000017176	cmss1	100	74.227	ENSOMEG00000012555	cmss1	100	74.570	Oryzias_melastigma
ENSMAMG00000017176	cmss1	70	63.861	ENSOGAG00000002045	CMSS1	89	63.861	Otolemur_garnettii
ENSMAMG00000017176	cmss1	79	59.740	ENSOARG00000017899	CMSS1	78	60.173	Ovis_aries
ENSMAMG00000017176	cmss1	83	57.676	ENSPPAG00000038515	CMSS1	74	62.871	Pan_paniscus
ENSMAMG00000017176	cmss1	100	54.138	ENSPPRG00000016767	CMSS1	100	53.401	Panthera_pardus
ENSMAMG00000017176	cmss1	100	54.138	ENSPTIG00000018274	CMSS1	100	53.793	Panthera_tigris_altaica
ENSMAMG00000017176	cmss1	100	53.103	ENSPTRG00000015157	CMSS1	100	51.974	Pan_troglodytes
ENSMAMG00000017176	cmss1	70	63.366	ENSPANG00000019980	CMSS1	80	63.366	Papio_anubis
ENSMAMG00000017176	cmss1	96	61.290	ENSPKIG00000012609	cmss1	97	62.362	Paramormyrops_kingsleyae
ENSMAMG00000017176	cmss1	70	64.851	ENSPSIG00000003849	CMSS1	88	64.851	Pelodiscus_sinensis
ENSMAMG00000017176	cmss1	77	75.758	ENSPMGG00000010286	cmss1	88	81.863	Periophthalmus_magnuspinnatus
ENSMAMG00000017176	cmss1	100	53.448	ENSPEMG00000016384	Cmss1	100	52.013	Peromyscus_maniculatus_bairdii
ENSMAMG00000017176	cmss1	70	50.000	ENSPMAG00000001146	cmss1	99	50.246	Petromyzon_marinus
ENSMAMG00000017176	cmss1	96	54.152	ENSPCIG00000015656	CMSS1	77	63.861	Phascolarctos_cinereus
ENSMAMG00000017176	cmss1	100	76.632	ENSPFOG00000016849	cmss1	100	75.945	Poecilia_formosa
ENSMAMG00000017176	cmss1	100	76.289	ENSPLAG00000008323	cmss1	100	75.601	Poecilia_latipinna
ENSMAMG00000017176	cmss1	100	77.320	ENSPMEG00000021020	cmss1	100	76.632	Poecilia_mexicana
ENSMAMG00000017176	cmss1	89	79.231	ENSPREG00000007618	cmss1	94	75.636	Poecilia_reticulata
ENSMAMG00000017176	cmss1	100	52.560	ENSPPYG00000013606	CMSS1	100	51.645	Pongo_abelii
ENSMAMG00000017176	cmss1	100	53.793	ENSPCOG00000020035	CMSS1	100	53.378	Propithecus_coquereli
ENSMAMG00000017176	cmss1	100	45.172	ENSPVAG00000017031	CMSS1	100	45.578	Pteropus_vampyrus
ENSMAMG00000017176	cmss1	91	79.623	ENSPNYG00000013428	cmss1	97	80.000	Pundamilia_nyererei
ENSMAMG00000017176	cmss1	100	62.963	ENSPNAG00000007912	cmss1	100	62.963	Pygocentrus_nattereri
ENSMAMG00000017176	cmss1	89	55.000	ENSRNOG00000027888	Cmss1	79	61.386	Rattus_norvegicus
ENSMAMG00000017176	cmss1	100	52.218	ENSRBIG00000037931	CMSS1	100	51.974	Rhinopithecus_bieti
ENSMAMG00000017176	cmss1	100	52.218	ENSRROG00000042910	CMSS1	100	51.974	Rhinopithecus_roxellana
ENSMAMG00000017176	cmss1	83	57.676	ENSSBOG00000030980	CMSS1	77	63.366	Saimiri_boliviensis_boliviensis
ENSMAMG00000017176	cmss1	70	63.861	ENSSHAG00000009321	CMSS1	80	63.861	Sarcophilus_harrisii
ENSMAMG00000017176	cmss1	100	64.286	ENSSFOG00015001509	cmss1	100	63.946	Scleropages_formosus
ENSMAMG00000017176	cmss1	100	76.712	ENSSMAG00000001653	cmss1	100	77.133	Scophthalmus_maximus
ENSMAMG00000017176	cmss1	100	85.274	ENSSDUG00000007719	cmss1	100	85.274	Seriola_dumerili
ENSMAMG00000017176	cmss1	90	78.676	ENSSLDG00000012300	cmss1	90	85.845	Seriola_lalandi_dorsalis
ENSMAMG00000017176	cmss1	100	43.960	ENSSARG00000003584	CMSS1	100	43.624	Sorex_araneus
ENSMAMG00000017176	cmss1	76	63.014	ENSSPUG00000003865	CMSS1	89	63.366	Sphenodon_punctatus
ENSMAMG00000017176	cmss1	94	75.357	ENSSPAG00000019182	cmss1	82	75.000	Stegastes_partitus
ENSMAMG00000017176	cmss1	100	53.103	ENSSSCG00000011970	CMSS1	100	52.189	Sus_scrofa
ENSMAMG00000017176	cmss1	70	62.376	ENSTGUG00000013635	CMSS1	88	62.376	Taeniopygia_guttata
ENSMAMG00000017176	cmss1	100	73.448	ENSTRUG00000015265	cmss1	100	71.724	Takifugu_rubripes
ENSMAMG00000017176	cmss1	70	73.892	ENSTNIG00000002880	cmss1	97	65.056	Tetraodon_nigroviridis
ENSMAMG00000017176	cmss1	100	37.586	ENSTBEG00000016722	CMSS1	100	37.241	Tupaia_belangeri
ENSMAMG00000017176	cmss1	100	51.724	ENSTTRG00000001562	CMSS1	100	52.069	Tursiops_truncatus
ENSMAMG00000017176	cmss1	97	52.962	ENSUAMG00000024209	CMSS1	91	63.861	Ursus_americanus
ENSMAMG00000017176	cmss1	81	59.322	ENSUMAG00000001983	CMSS1	78	63.366	Ursus_maritimus
ENSMAMG00000017176	cmss1	55	61.875	ENSVPAG00000000263	CMSS1	57	61.875	Vicugna_pacos
ENSMAMG00000017176	cmss1	83	58.921	ENSVVUG00000021647	-	82	64.356	Vulpes_vulpes
ENSMAMG00000017176	cmss1	70	63.366	ENSVVUG00000007776	-	80	63.366	Vulpes_vulpes
ENSMAMG00000017176	cmss1	100	53.448	ENSXETG00000011858	cmss1	100	53.793	Xenopus_tropicalis
ENSMAMG00000017176	cmss1	94	72.000	ENSXCOG00000018724	cmss1	94	72.000	Xiphophorus_couchianus
ENSMAMG00000017176	cmss1	91	73.308	ENSXMAG00000011243	cmss1	99	73.308	Xiphophorus_maculatus