EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000017431 (Gene tree)
Gene ID: 113124061
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 3277 bases
Position: chrOOHQ01000093.1:18483679-18486955
Accession: 113124061
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000025967	MMR_HSR1	PF01926.23	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000026633	-	2410	-	ENSMAMP00000025967	234 (aa)	XP_026152310	UPI000E4580F7

Gene Model

Click here to download ENSMAMG00000017431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000017431's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000017431	zgc:101559	62	42.069	ENSMAMG00000006886	RAB15	67	42.069
ENSMAMG00000017431	zgc:101559	73	37.427	ENSMAMG00000016207	-	75	37.427
ENSMAMG00000017431	zgc:101559	65	32.680	ENSMAMG00000001748	rhebl1	82	32.680
ENSMAMG00000017431	zgc:101559	72	39.645	ENSMAMG00000012750	rab14	76	39.645
ENSMAMG00000017431	zgc:101559	63	42.857	ENSMAMG00000002795	rab15	68	42.857
ENSMAMG00000017431	zgc:101559	55	45.736	ENSMAMG00000020214	rab34b	51	45.736
ENSMAMG00000017431	zgc:101559	64	39.597	ENSMAMG00000009672	rab6ba	71	39.597
ENSMAMG00000017431	zgc:101559	77	46.961	ENSMAMG00000018306	-	81	48.214
ENSMAMG00000017431	zgc:101559	76	36.313	ENSMAMG00000012233	rab6bb	84	36.313
ENSMAMG00000017431	zgc:101559	66	44.516	ENSMAMG00000011131	-	72	44.516
ENSMAMG00000017431	zgc:101559	65	34.615	ENSMAMG00000013538	rab9a	77	34.615
ENSMAMG00000017431	zgc:101559	84	36.224	ENSMAMG00000018445	rab18b	93	36.224
ENSMAMG00000017431	zgc:101559	66	41.558	ENSMAMG00000011549	rab2a	72	41.558
ENSMAMG00000017431	zgc:101559	85	35.922	ENSMAMG00000020246	-	97	35.922
ENSMAMG00000017431	zgc:101559	100	54.274	ENSMAMG00000000565	rab33a	100	54.274
ENSMAMG00000017431	zgc:101559	65	39.744	ENSMAMG00000021095	si:dkey-13a21.4	75	39.744
ENSMAMG00000017431	zgc:101559	63	40.136	ENSMAMG00000014320	rab18a	71	40.136
ENSMAMG00000017431	zgc:101559	70	34.146	ENSMAMG00000005606	kras	90	34.659
ENSMAMG00000017431	zgc:101559	85	35.437	ENSMAMG00000023962	RAB7A	97	35.437
ENSMAMG00000017431	zgc:101559	62	31.788	ENSMAMG00000022707	dnajc27	55	31.788
ENSMAMG00000017431	zgc:101559	63	41.216	ENSMAMG00000002296	rab42a	67	41.216
ENSMAMG00000017431	zgc:101559	79	31.183	ENSMAMG00000008168	rabl2	75	31.183
ENSMAMG00000017431	zgc:101559	71	38.012	ENSMAMG00000012471	rab25a	79	38.012
ENSMAMG00000017431	zgc:101559	74	46.821	ENSMAMG00000020135	zgc:171927	78	46.821
ENSMAMG00000017431	zgc:101559	79	33.871	ENSMAMG00000004359	hrasb	97	34.343
ENSMAMG00000017431	zgc:101559	69	40.994	ENSMAMG00000012488	rab6a	76	40.994
ENSMAMG00000017431	zgc:101559	51	31.405	ENSMAMG00000011635	arl4aa	60	31.405
ENSMAMG00000017431	zgc:101559	76	45.506	ENSMAMG00000011973	rab30	83	45.506
ENSMAMG00000017431	zgc:101559	81	30.918	ENSMAMG00000010217	rasl11a	80	30.918
ENSMAMG00000017431	zgc:101559	63	40.816	ENSMAMG00000010297	rab25b	68	40.816
ENSMAMG00000017431	zgc:101559	68	30.178	ENSMAMG00000015214	rab20	61	30.178
ENSMAMG00000017431	zgc:101559	72	39.645	ENSMAMG00000018450	-	76	39.645
ENSMAMG00000017431	zgc:101559	62	33.108	ENSMAMG00000001320	si:cabz01085950.1	60	33.108
ENSMAMG00000017431	zgc:101559	69	33.533	ENSMAMG00000000238	rab32b	76	33.533
ENSMAMG00000017431	zgc:101559	63	33.784	ENSMAMG00000006281	rheb	79	33.784
ENSMAMG00000017431	zgc:101559	85	35.407	ENSMAMG00000018556	rab11ba	97	34.951
ENSMAMG00000017431	zgc:101559	74	32.022	ENSMAMG00000014747	rasl11b	71	32.022
ENSMAMG00000017431	zgc:101559	85	30.303	ENSMAMG00000004106	rras	95	30.303
ENSMAMG00000017431	zgc:101559	69	33.540	ENSMAMG00000013700	si:ch73-116o1.2	81	34.682
ENSMAMG00000017431	zgc:101559	85	36.946	ENSMAMG00000017327	rab11a	93	36.946
ENSMAMG00000017431	zgc:101559	67	44.025	ENSMAMG00000021329	RAB39B	74	44.025
ENSMAMG00000017431	zgc:101559	68	38.509	ENSMAMG00000020286	-	77	38.509
ENSMAMG00000017431	zgc:101559	77	37.363	ENSMAMG00000006862	rab12	88	35.455
ENSMAMG00000017431	zgc:101559	77	64.398	ENSMAMG00000001098	rab33ba	79	64.398
ENSMAMG00000017431	zgc:101559	77	38.889	ENSMAMG00000006378	rab11bb	82	38.889
ENSMAMG00000017431	zgc:101559	73	38.012	ENSMAMG00000022322	rab5c	75	38.012
ENSMAMG00000017431	zgc:101559	77	37.222	ENSMAMG00000010278	rab11al	82	37.222
ENSMAMG00000017431	zgc:101559	82	43.455	ENSMAMG00000019230	si:dkey-16l2.16	88	43.455
ENSMAMG00000017431	zgc:101559	74	53.403	ENSMAMG00000006640	-	79	53.403
ENSMAMG00000017431	zgc:101559	77	45.304	ENSMAMG00000001408	rab1ba	83	47.619
ENSMAMG00000017431	zgc:101559	62	36.875	ENSMAMG00000010136	rab36	59	36.875
ENSMAMG00000017431	zgc:101559	65	37.975	ENSMAMG00000009927	rab9b	77	37.975
ENSMAMG00000017431	zgc:101559	64	42.953	ENSMAMG00000020859	rab41	70	42.953
ENSMAMG00000017431	zgc:101559	72	38.596	ENSMAMG00000006024	rab22a	84	38.596
ENSMAMG00000017431	zgc:101559	77	37.778	ENSMAMG00000018533	-	82	37.778
ENSMAMG00000017431	zgc:101559	80	39.896	ENSMAMG00000014602	rab13	80	43.293
ENSMAMG00000017431	zgc:101559	84	33.168	ENSMAMG00000006963	RAB29	98	33.168
ENSMAMG00000017431	zgc:101559	71	34.940	ENSMAMG00000015456	rab23	71	36.486
ENSMAMG00000017431	zgc:101559	84	36.364	ENSMAMG00000012573	rab5aa	89	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000017431	zgc:101559	100	87.179	ENSAPOG00000007503	zgc:101559	100	87.179	Acanthochromis_polyacanthus
ENSMAMG00000017431	zgc:101559	90	91.469	ENSACIG00000021459	zgc:101559	93	91.469	Amphilophus_citrinellus
ENSMAMG00000017431	zgc:101559	100	87.607	ENSAOCG00000024675	zgc:101559	100	87.607	Amphiprion_ocellaris
ENSMAMG00000017431	zgc:101559	100	87.607	ENSAPEG00000005176	zgc:101559	100	87.607	Amphiprion_percula
ENSMAMG00000017431	zgc:101559	100	90.598	ENSATEG00000007761	zgc:101559	100	90.598	Anabas_testudineus
ENSMAMG00000017431	zgc:101559	98	89.520	ENSACLG00000027006	zgc:101559	97	89.520	Astatotilapia_calliptera
ENSMAMG00000017431	zgc:101559	100	72.650	ENSAMXG00000040460	zgc:101559	94	72.650	Astyanax_mexicanus
ENSMAMG00000017431	zgc:101559	100	81.624	ENSCSEG00000006243	zgc:101559	100	81.624	Cynoglossus_semilaevis
ENSMAMG00000017431	zgc:101559	100	83.333	ENSCVAG00000019227	zgc:101559	100	83.333	Cyprinodon_variegatus
ENSMAMG00000017431	zgc:101559	100	74.043	ENSDARG00000003257	zgc:101559	100	74.043	Danio_rerio
ENSMAMG00000017431	zgc:101559	100	82.051	ENSFHEG00000011483	zgc:101559	100	82.051	Fundulus_heteroclitus
ENSMAMG00000017431	zgc:101559	91	81.221	ENSGMOG00000011665	zgc:101559	100	81.221	Gadus_morhua
ENSMAMG00000017431	zgc:101559	100	81.624	ENSGAFG00000021202	zgc:101559	100	81.624	Gambusia_affinis
ENSMAMG00000017431	zgc:101559	91	83.099	ENSGACG00000001725	zgc:101559	91	83.099	Gasterosteus_aculeatus
ENSMAMG00000017431	zgc:101559	100	89.744	ENSHBUG00000007827	zgc:101559	100	89.744	Haplochromis_burtoni
ENSMAMG00000017431	zgc:101559	100	76.695	ENSHCOG00000009133	zgc:101559	100	78.151	Hippocampus_comes
ENSMAMG00000017431	zgc:101559	92	75.926	ENSIPUG00000022394	zgc:101559	92	75.926	Ictalurus_punctatus
ENSMAMG00000017431	zgc:101559	100	80.426	ENSKMAG00000002862	zgc:101559	100	80.426	Kryptolebias_marmoratus
ENSMAMG00000017431	zgc:101559	100	88.462	ENSLBEG00000025798	zgc:101559	100	88.462	Labrus_bergylta
ENSMAMG00000017431	zgc:101559	86	67.164	ENSLACG00000011557	zgc:101559	87	67.164	Latimeria_chalumnae
ENSMAMG00000017431	zgc:101559	89	76.077	ENSLOCG00000005904	zgc:101559	89	76.077	Lepisosteus_oculatus
ENSMAMG00000017431	zgc:101559	100	89.744	ENSMZEG00005021778	zgc:101559	100	89.744	Maylandia_zebra
ENSMAMG00000017431	zgc:101559	100	83.761	ENSMMOG00000019779	zgc:101559	100	83.761	Mola_mola
ENSMAMG00000017431	zgc:101559	100	88.034	ENSMALG00000003712	zgc:101559	100	88.034	Monopterus_albus
ENSMAMG00000017431	zgc:101559	100	88.889	ENSNBRG00000002684	zgc:101559	100	88.889	Neolamprologus_brichardi
ENSMAMG00000017431	zgc:101559	100	89.744	ENSONIG00000006715	-	100	89.744	Oreochromis_niloticus
ENSMAMG00000017431	zgc:101559	100	81.197	ENSORLG00000030642	zgc:101559	100	81.197	Oryzias_latipes
ENSMAMG00000017431	zgc:101559	100	80.769	ENSORLG00020012685	zgc:101559	100	80.769	Oryzias_latipes_hni
ENSMAMG00000017431	zgc:101559	100	80.769	ENSORLG00015016047	zgc:101559	100	80.769	Oryzias_latipes_hsok
ENSMAMG00000017431	zgc:101559	100	83.761	ENSOMEG00000013128	zgc:101559	100	83.761	Oryzias_melastigma
ENSMAMG00000017431	zgc:101559	88	76.585	ENSPKIG00000013397	zgc:101559	86	76.585	Paramormyrops_kingsleyae
ENSMAMG00000017431	zgc:101559	100	83.761	ENSPFOG00000009101	-	100	83.761	Poecilia_formosa
ENSMAMG00000017431	zgc:101559	100	83.761	ENSPLAG00000020627	zgc:101559	100	83.761	Poecilia_latipinna
ENSMAMG00000017431	zgc:101559	100	83.761	ENSPMEG00000010152	zgc:101559	100	83.761	Poecilia_mexicana
ENSMAMG00000017431	zgc:101559	100	83.333	ENSPREG00000007017	zgc:101559	100	83.333	Poecilia_reticulata
ENSMAMG00000017431	zgc:101559	100	89.744	ENSPNYG00000012922	zgc:101559	100	89.744	Pundamilia_nyererei
ENSMAMG00000017431	zgc:101559	100	74.786	ENSPNAG00000017856	zgc:101559	100	74.786	Pygocentrus_nattereri
ENSMAMG00000017431	zgc:101559	99	69.099	ENSSFOG00015006175	zgc:101559	100	69.099	Scleropages_formosus
ENSMAMG00000017431	zgc:101559	99	82.833	ENSSMAG00000002229	zgc:101559	99	82.833	Scophthalmus_maximus
ENSMAMG00000017431	zgc:101559	100	91.453	ENSSDUG00000008151	zgc:101559	100	91.453	Seriola_dumerili
ENSMAMG00000017431	zgc:101559	100	90.598	ENSSLDG00000019214	zgc:101559	100	90.598	Seriola_lalandi_dorsalis
ENSMAMG00000017431	zgc:101559	100	89.316	ENSSPAG00000006404	zgc:101559	100	89.316	Stegastes_partitus
ENSMAMG00000017431	zgc:101559	100	81.197	ENSTRUG00000009903	zgc:101559	100	81.197	Takifugu_rubripes
ENSMAMG00000017431	zgc:101559	93	81.651	ENSTNIG00000015000	zgc:101559	98	77.489	Tetraodon_nigroviridis
ENSMAMG00000017431	zgc:101559	100	82.906	ENSXCOG00000018683	zgc:101559	100	82.906	Xiphophorus_couchianus
ENSMAMG00000017431	zgc:101559	100	82.906	ENSXMAG00000011171	zgc:101559	100	82.906	Xiphophorus_maculatus