EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000017583 (Gene tree)
Gene ID: 113144389
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 2117 bases
Position: chrOOHQ01000077.1:5704808-5706924
Accession: 113144389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000026176	Gar1	PF04410.14	1.1e-39	1	1
ENSMAMP00000026184	Gar1	PF04410.14	1.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000026849	-	682	-	ENSMAMP00000026176	221 (aa)	XP_026186204	UPI000E45EC1A
ENSMAMT00000026857	-	699	-	ENSMAMP00000026184	232 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000017583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000017583's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000017583	gar1	67	86.577	ENSTSYG00000013668	-	71	86.755	Carlito_syrichta
ENSMAMG00000017583	gar1	53	91.525	ENSDNOG00000037632	GAR1	55	91.743	Dasypus_novemcinctus
ENSMAMG00000017583	gar1	50	92.727	ENSDORG00000000482	Gar1	50	92.661	Dipodomys_ordii
ENSMAMG00000017583	gar1	93	52.555	ENSFCAG00000025841	-	51	59.633	Felis_catus
ENSMAMG00000017583	gar1	50	96.364	ENSFHEG00000008068	gar1	51	96.330	Fundulus_heteroclitus
ENSMAMG00000017583	gar1	70	93.631	ENSHBUG00000023860	gar1	79	93.631	Haplochromis_burtoni
ENSMAMG00000017583	gar1	50	95.455	ENSKMAG00000010402	gar1	52	96.330	Kryptolebias_marmoratus
ENSMAMG00000017583	gar1	71	79.845	ENSLACG00000003306	GAR1	63	89.423	Latimeria_chalumnae
ENSMAMG00000017583	gar1	62	88.406	ENSMAUG00000016788	Gar1	68	98.148	Mesocricetus_auratus
ENSMAMG00000017583	gar1	50	90.991	ENSMICG00000003326	GAR1	50	91.743	Microcebus_murinus
ENSMAMG00000017583	gar1	72	83.125	ENSMMOG00000004156	gar1	60	95.122	Mola_mola
ENSMAMG00000017583	gar1	51	87.611	ENSMODG00000005897	GAR1	57	90.991	Monodelphis_domestica
ENSMAMG00000017583	gar1	62	87.681	MGP_CAROLIEiJ_G0025627	Gar1	68	98.148	Mus_caroli
ENSMAMG00000017583	gar1	64	86.525	ENSMUSG00000028010	Gar1	68	98.148	Mus_musculus
ENSMAMG00000017583	gar1	64	86.525	MGP_PahariEiJ_G0027076	Gar1	68	98.148	Mus_pahari
ENSMAMG00000017583	gar1	64	86.525	MGP_SPRETEiJ_G0026580	Gar1	68	98.148	Mus_spretus
ENSMAMG00000017583	gar1	62	88.406	ENSPEMG00000015838	Gar1	68	98.148	Peromyscus_maniculatus_bairdii
ENSMAMG00000017583	gar1	51	75.893	ENSRBIG00000042411	-	53	76.147	Rhinopithecus_bieti
ENSMAMG00000017583	gar1	51	75.893	ENSRROG00000044348	-	52	76.147	Rhinopithecus_roxellana
ENSMAMG00000017583	gar1	63	80.822	ENSSPUG00000008707	GAR1	61	92.661	Sphenodon_punctatus