EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000017586 (Gene tree)
Gene ID: 113130780
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 7781 bases
Position: chrOOHQ01000082.1:12093457-12101237
Accession: 113130780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000026196	dsrm	PF00035.26	7.5e-46	1	4
ENSMAMP00000026196	dsrm	PF00035.26	7.5e-46	2	4
ENSMAMP00000026196	dsrm	PF00035.26	7.5e-46	3	4
ENSMAMP00000026196	dsrm	PF00035.26	7.5e-46	4	4
ENSMAMP00000026181	dsrm	PF00035.26	9.5e-46	1	4
ENSMAMP00000026181	dsrm	PF00035.26	9.5e-46	2	4
ENSMAMP00000026181	dsrm	PF00035.26	9.5e-46	3	4
ENSMAMP00000026181	dsrm	PF00035.26	9.5e-46	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000026869	-	2486	-	ENSMAMP00000026196	663 (aa)	-	-
ENSMAMT00000026855	-	3965	-	ENSMAMP00000026181	691 (aa)	XP_026163416	UPI000E4589C5

Gene Model

Click here to download ENSMAMG00000017586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000017586's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000017586	stau1	88	50.245	ENSMAMG00000023036	stau2	100	46.774

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000017586	stau1	99	73.120	ENSG00000124214	STAU1	99	75.654	Homo_sapiens
ENSMAMG00000017586	stau1	100	96.380	ENSAPOG00000017260	stau1	100	95.948	Acanthochromis_polyacanthus
ENSMAMG00000017586	stau1	99	71.322	ENSAMEG00000013681	STAU1	99	69.571	Ailuropoda_melanoleuca
ENSMAMG00000017586	stau1	100	93.213	ENSACIG00000015918	stau1	100	94.067	Amphilophus_citrinellus
ENSMAMG00000017586	stau1	100	96.833	ENSAOCG00000012224	stau1	100	96.671	Amphiprion_ocellaris
ENSMAMG00000017586	stau1	100	96.833	ENSAPEG00000012308	stau1	100	96.671	Amphiprion_percula
ENSMAMG00000017586	stau1	100	96.102	ENSATEG00000024600	stau1	100	96.102	Anabas_testudineus
ENSMAMG00000017586	stau1	99	74.041	ENSAPLG00000010527	STAU1	100	72.061	Anas_platyrhynchos
ENSMAMG00000017586	stau1	99	74.041	ENSACAG00000015909	STAU1	99	73.409	Anolis_carolinensis
ENSMAMG00000017586	stau1	99	72.119	ENSANAG00000032714	STAU1	99	72.119	Aotus_nancymaae
ENSMAMG00000017586	stau1	100	93.703	ENSACLG00000012270	stau1	100	93.525	Astatotilapia_calliptera
ENSMAMG00000017586	stau1	100	80.075	ENSAMXG00000016812	stau1	98	82.353	Astyanax_mexicanus
ENSMAMG00000017586	stau1	99	72.917	ENSBTAG00000000241	STAU1	99	72.917	Bos_taurus
ENSMAMG00000017586	stau1	99	72.932	ENSCJAG00000016233	STAU1	99	73.295	Callithrix_jacchus
ENSMAMG00000017586	stau1	99	72.727	ENSCAFG00000011347	STAU1	97	72.727	Canis_familiaris
ENSMAMG00000017586	stau1	99	70.425	ENSCAFG00020017123	STAU1	99	73.934	Canis_lupus_dingo
ENSMAMG00000017586	stau1	99	72.348	ENSCHIG00000001799	-	99	72.348	Capra_hircus
ENSMAMG00000017586	stau1	99	72.952	ENSTSYG00000036179	-	99	72.779	Carlito_syrichta
ENSMAMG00000017586	stau1	75	74.044	ENSCAPG00000017041	STAU1	99	73.843	Cavia_aperea
ENSMAMG00000017586	stau1	74	72.177	ENSCPOG00000005566	STAU1	99	72.177	Cavia_porcellus
ENSMAMG00000017586	stau1	99	72.119	ENSCCAG00000034339	STAU1	99	72.119	Cebus_capucinus
ENSMAMG00000017586	stau1	99	76.840	ENSCATG00000028474	STAU1	99	76.840	Cercocebus_atys
ENSMAMG00000017586	stau1	75	61.245	ENSCLAG00000002784	-	99	61.245	Chinchilla_lanigera
ENSMAMG00000017586	stau1	74	75.403	ENSCLAG00000006516	-	99	75.403	Chinchilla_lanigera
ENSMAMG00000017586	stau1	75	75.855	ENSCSAG00000014986	STAU1	99	75.855	Chlorocebus_sabaeus
ENSMAMG00000017586	stau1	99	73.358	ENSCHOG00000001511	STAU1	99	73.724	Choloepus_hoffmanni
ENSMAMG00000017586	stau1	100	73.229	ENSCPBG00000026741	STAU1	100	73.229	Chrysemys_picta_bellii
ENSMAMG00000017586	stau1	99	73.308	ENSCANG00000039220	STAU1	99	73.674	Colobus_angolensis_palliatus
ENSMAMG00000017586	stau1	74	71.026	ENSCGRG00001013453	Stau1	99	71.026	Cricetulus_griseus_chok1gshd
ENSMAMG00000017586	stau1	74	71.026	ENSCGRG00000007216	Stau1	99	71.026	Cricetulus_griseus_crigri
ENSMAMG00000017586	stau1	100	79.765	ENSCSEG00000000792	stau1	100	80.282	Cynoglossus_semilaevis
ENSMAMG00000017586	stau1	98	84.496	ENSCVAG00000005906	stau1	100	85.853	Cyprinodon_variegatus
ENSMAMG00000017586	stau1	100	81.955	ENSDARG00000044182	stau1	100	81.319	Danio_rerio
ENSMAMG00000017586	stau1	99	73.724	ENSDNOG00000014933	STAU1	97	73.535	Dasypus_novemcinctus
ENSMAMG00000017586	stau1	74	74.082	ENSDORG00000030220	Stau1	99	74.082	Dipodomys_ordii
ENSMAMG00000017586	stau1	69	77.181	ENSETEG00000018235	STAU1	88	76.821	Echinops_telfairi
ENSMAMG00000017586	stau1	99	72.305	ENSEASG00005023343	STAU1	99	72.659	Equus_asinus_asinus
ENSMAMG00000017586	stau1	99	73.120	ENSECAG00000012894	STAU1	99	73.485	Equus_caballus
ENSMAMG00000017586	stau1	67	78.462	ENSEEUG00000014344	STAU1	68	78.462	Erinaceus_europaeus
ENSMAMG00000017586	stau1	99	84.993	ENSELUG00000002529	stau1	99	85.781	Esox_lucius
ENSMAMG00000017586	stau1	99	73.864	ENSFCAG00000001447	STAU1	99	73.864	Felis_catus
ENSMAMG00000017586	stau1	99	74.107	ENSFALG00000012940	STAU1	100	73.181	Ficedula_albicollis
ENSMAMG00000017586	stau1	74	74.597	ENSFDAG00000014119	-	99	74.597	Fukomys_damarensis
ENSMAMG00000017586	stau1	75	57.143	ENSFDAG00000020837	-	99	55.734	Fukomys_damarensis
ENSMAMG00000017586	stau1	100	90.105	ENSFHEG00000013517	stau1	99	89.769	Fundulus_heteroclitus
ENSMAMG00000017586	stau1	100	75.474	ENSGMOG00000016850	stau1	100	74.334	Gadus_morhua
ENSMAMG00000017586	stau1	99	74.851	ENSGALG00000004736	STAU1	100	74.322	Gallus_gallus
ENSMAMG00000017586	stau1	100	90.405	ENSGAFG00000010437	stau1	100	90.072	Gambusia_affinis
ENSMAMG00000017586	stau1	100	92.630	ENSGACG00000001352	stau1	100	92.630	Gasterosteus_aculeatus
ENSMAMG00000017586	stau1	100	73.714	ENSGAGG00000009825	STAU1	100	73.714	Gopherus_agassizii
ENSMAMG00000017586	stau1	99	68.343	ENSGGOG00000025351	STAU1	99	78.333	Gorilla_gorilla
ENSMAMG00000017586	stau1	100	93.853	ENSHBUG00000023668	stau1	100	93.669	Haplochromis_burtoni
ENSMAMG00000017586	stau1	74	76.122	ENSHGLG00000008730	STAU1	99	76.122	Heterocephalus_glaber_female
ENSMAMG00000017586	stau1	74	76.122	ENSHGLG00100000098	STAU1	99	76.122	Heterocephalus_glaber_male
ENSMAMG00000017586	stau1	100	86.078	ENSHCOG00000018461	stau1	100	85.201	Hippocampus_comes
ENSMAMG00000017586	stau1	97	80.000	ENSIPUG00000023725	stau1	100	76.845	Ictalurus_punctatus
ENSMAMG00000017586	stau1	74	74.898	ENSSTOG00000003634	STAU1	99	74.898	Ictidomys_tridecemlineatus
ENSMAMG00000017586	stau1	74	74.082	ENSJJAG00000020032	Stau1	99	74.082	Jaculus_jaculus
ENSMAMG00000017586	stau1	99	88.722	ENSKMAG00000007135	stau1	99	89.291	Kryptolebias_marmoratus
ENSMAMG00000017586	stau1	100	93.488	ENSLBEG00000020172	stau1	100	93.488	Labrus_bergylta
ENSMAMG00000017586	stau1	99	74.340	ENSLACG00000016157	STAU1	97	73.782	Latimeria_chalumnae
ENSMAMG00000017586	stau1	99	78.529	ENSLOCG00000003134	stau1	100	78.993	Lepisosteus_oculatus
ENSMAMG00000017586	stau1	77	75.490	ENSLAFG00000003238	STAU1	99	75.490	Loxodonta_africana
ENSMAMG00000017586	stau1	99	76.840	ENSMFAG00000040931	STAU1	99	78.148	Macaca_fascicularis
ENSMAMG00000017586	stau1	99	68.156	ENSMMUG00000002302	STAU1	99	78.148	Macaca_mulatta
ENSMAMG00000017586	stau1	99	75.855	ENSMNEG00000033821	STAU1	99	75.855	Macaca_nemestrina
ENSMAMG00000017586	stau1	99	73.120	ENSMLEG00000031383	STAU1	99	73.485	Mandrillus_leucophaeus
ENSMAMG00000017586	stau1	100	93.694	ENSMZEG00005015605	stau1	100	93.516	Maylandia_zebra
ENSMAMG00000017586	stau1	99	74.041	ENSMGAG00000004719	STAU1	100	72.061	Meleagris_gallopavo
ENSMAMG00000017586	stau1	74	71.026	ENSMAUG00000013846	Stau1	99	71.026	Mesocricetus_auratus
ENSMAMG00000017586	stau1	99	71.348	ENSMICG00000001995	STAU1	99	71.348	Microcebus_murinus
ENSMAMG00000017586	stau1	74	71.429	ENSMOCG00000018743	Stau1	99	71.429	Microtus_ochrogaster
ENSMAMG00000017586	stau1	100	89.870	ENSMMOG00000015455	stau1	100	89.870	Mola_mola
ENSMAMG00000017586	stau1	99	73.621	ENSMODG00000016276	STAU1	99	73.621	Monodelphis_domestica
ENSMAMG00000017586	stau1	100	95.626	ENSMALG00000000045	stau1	100	95.369	Monopterus_albus
ENSMAMG00000017586	stau1	74	72.245	MGP_CAROLIEiJ_G0024699	Stau1	100	72.098	Mus_caroli
ENSMAMG00000017586	stau1	74	71.633	ENSMUSG00000039536	Stau1	100	71.487	Mus_musculus
ENSMAMG00000017586	stau1	74	71.633	MGP_PahariEiJ_G0026141	Stau1	99	71.487	Mus_pahari
ENSMAMG00000017586	stau1	74	71.487	MGP_SPRETEiJ_G0025619	Stau1	100	71.487	Mus_spretus
ENSMAMG00000017586	stau1	99	71.471	ENSMPUG00000017581	STAU1	99	71.471	Mustela_putorius_furo
ENSMAMG00000017586	stau1	99	71.970	ENSMLUG00000008407	STAU1	97	71.970	Myotis_lucifugus
ENSMAMG00000017586	stau1	74	72.581	ENSNGAG00000007108	Stau1	99	72.435	Nannospalax_galili
ENSMAMG00000017586	stau1	100	93.703	ENSNBRG00000017596	stau1	100	93.525	Neolamprologus_brichardi
ENSMAMG00000017586	stau1	99	72.932	ENSNLEG00000006955	STAU1	99	74.553	Nomascus_leucogenys
ENSMAMG00000017586	stau1	69	79.476	ENSMEUG00000003263	STAU1	80	79.221	Notamacropus_eugenii
ENSMAMG00000017586	stau1	96	71.161	ENSOPRG00000014569	STAU1	96	71.004	Ochotona_princeps
ENSMAMG00000017586	stau1	75	75.252	ENSODEG00000006523	STAU1	99	75.252	Octodon_degus
ENSMAMG00000017586	stau1	100	90.975	ENSONIG00000004152	stau1	99	90.909	Oreochromis_niloticus
ENSMAMG00000017586	stau1	99	72.206	ENSOANG00000006394	STAU1	100	71.650	Ornithorhynchus_anatinus
ENSMAMG00000017586	stau1	99	72.420	ENSOCUG00000006214	STAU1	99	72.420	Oryctolagus_cuniculus
ENSMAMG00000017586	stau1	100	89.759	ENSOMEG00000002388	stau1	99	88.406	Oryzias_melastigma
ENSMAMG00000017586	stau1	74	52.113	ENSOGAG00000028222	-	99	51.600	Otolemur_garnettii
ENSMAMG00000017586	stau1	99	73.714	ENSOGAG00000002127	STAU1	97	73.714	Otolemur_garnettii
ENSMAMG00000017586	stau1	99	72.348	ENSOARG00000012204	STAU1	99	70.877	Ovis_aries
ENSMAMG00000017586	stau1	99	68.156	ENSPPAG00000032023	STAU1	99	78.333	Pan_paniscus
ENSMAMG00000017586	stau1	99	74.053	ENSPPRG00000003436	STAU1	99	76.056	Panthera_pardus
ENSMAMG00000017586	stau1	99	74.053	ENSPTIG00000011768	STAU1	99	75.397	Panthera_tigris_altaica
ENSMAMG00000017586	stau1	99	68.156	ENSPTRG00000023130	STAU1	99	78.333	Pan_troglodytes
ENSMAMG00000017586	stau1	99	76.840	ENSPANG00000020560	STAU1	99	76.840	Papio_anubis
ENSMAMG00000017586	stau1	100	80.419	ENSPKIG00000024588	stau1	100	80.171	Paramormyrops_kingsleyae
ENSMAMG00000017586	stau1	99	74.814	ENSPSIG00000010731	STAU1	99	74.286	Pelodiscus_sinensis
ENSMAMG00000017586	stau1	100	86.083	ENSPMGG00000018553	stau1	100	86.083	Periophthalmus_magnuspinnatus
ENSMAMG00000017586	stau1	74	71.026	ENSPEMG00000022045	Stau1	99	71.026	Peromyscus_maniculatus_bairdii
ENSMAMG00000017586	stau1	99	73.094	ENSPCIG00000023269	STAU1	98	75.581	Phascolarctos_cinereus
ENSMAMG00000017586	stau1	100	89.371	ENSPFOG00000017253	stau1	100	88.937	Poecilia_formosa
ENSMAMG00000017586	stau1	60	86.284	ENSPLAG00000014829	stau1	97	83.290	Poecilia_latipinna
ENSMAMG00000017586	stau1	100	85.057	ENSPMEG00000007495	stau1	99	85.180	Poecilia_mexicana
ENSMAMG00000017586	stau1	100	89.371	ENSPREG00000003477	stau1	100	89.080	Poecilia_reticulata
ENSMAMG00000017586	stau1	99	72.983	ENSPPYG00000011111	STAU1	99	73.346	Pongo_abelii
ENSMAMG00000017586	stau1	75	66.800	ENSPCAG00000002459	STAU1	100	66.800	Procavia_capensis
ENSMAMG00000017586	stau1	99	72.538	ENSPCOG00000027746	STAU1	99	73.757	Propithecus_coquereli
ENSMAMG00000017586	stau1	68	79.195	ENSPVAG00000015019	STAU1	86	78.808	Pteropus_vampyrus
ENSMAMG00000017586	stau1	100	93.853	ENSPNYG00000014436	stau1	100	93.669	Pundamilia_nyererei
ENSMAMG00000017586	stau1	100	81.259	ENSPNAG00000011323	stau1	100	81.727	Pygocentrus_nattereri
ENSMAMG00000017586	stau1	74	71.026	ENSRNOG00000007781	Stau1	99	71.026	Rattus_norvegicus
ENSMAMG00000017586	stau1	75	75.000	ENSRBIG00000037345	STAU1	100	74.701	Rhinopithecus_bieti
ENSMAMG00000017586	stau1	99	75.855	ENSRROG00000039008	STAU1	99	75.855	Rhinopithecus_roxellana
ENSMAMG00000017586	stau1	99	72.119	ENSSBOG00000034448	STAU1	99	72.545	Saimiri_boliviensis_boliviensis
ENSMAMG00000017586	stau1	99	74.621	ENSSHAG00000009492	STAU1	99	73.472	Sarcophilus_harrisii
ENSMAMG00000017586	stau1	100	81.764	ENSSFOG00015021497	stau1	100	81.349	Scleropages_formosus
ENSMAMG00000017586	stau1	100	95.173	ENSSMAG00000017410	stau1	100	94.935	Scophthalmus_maximus
ENSMAMG00000017586	stau1	100	96.833	ENSSDUG00000019439	stau1	100	96.527	Seriola_dumerili
ENSMAMG00000017586	stau1	100	97.134	ENSSLDG00000025040	stau1	100	96.816	Seriola_lalandi_dorsalis
ENSMAMG00000017586	stau1	100	73.692	ENSSPUG00000017983	STAU1	99	74.336	Sphenodon_punctatus
ENSMAMG00000017586	stau1	100	96.983	ENSSPAG00000019275	stau1	100	96.671	Stegastes_partitus
ENSMAMG00000017586	stau1	99	72.932	ENSSSCG00000027444	STAU1	99	75.500	Sus_scrofa
ENSMAMG00000017586	stau1	99	73.785	ENSTGUG00000008784	STAU1	100	71.172	Taeniopygia_guttata
ENSMAMG00000017586	stau1	100	89.805	ENSTRUG00000005837	stau1	100	90.072	Takifugu_rubripes
ENSMAMG00000017586	stau1	97	88.682	ENSTNIG00000014732	stau1	99	87.852	Tetraodon_nigroviridis
ENSMAMG00000017586	stau1	99	62.101	ENSTBEG00000009404	STAU1	99	62.101	Tupaia_belangeri
ENSMAMG00000017586	stau1	69	74.672	ENSTTRG00000004285	STAU1	80	74.459	Tursiops_truncatus
ENSMAMG00000017586	stau1	75	74.008	ENSUAMG00000025449	STAU1	99	74.008	Ursus_americanus
ENSMAMG00000017586	stau1	57	70.833	ENSUMAG00000024475	STAU1	89	70.833	Ursus_maritimus
ENSMAMG00000017586	stau1	99	72.932	ENSVPAG00000001313	STAU1	99	73.295	Vicugna_pacos
ENSMAMG00000017586	stau1	99	70.571	ENSVVUG00000022325	STAU1	99	70.571	Vulpes_vulpes
ENSMAMG00000017586	stau1	96	72.755	ENSXETG00000001783	stau1	96	72.000	Xenopus_tropicalis
ENSMAMG00000017586	stau1	56	86.595	ENSXCOG00000008804	stau1	94	85.255	Xiphophorus_couchianus
ENSMAMG00000017586	stau1	100	89.655	ENSXMAG00000016175	stau1	99	89.481	Xiphophorus_maculatus