EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000017590 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 124336 bases
Position: chrOOHQ01000092.1:6185756-6310091
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000026189	MMR_HSR1	PF01926.23	2.5e-08	1	1
ENSMAMP00000026194	MMR_HSR1	PF01926.23	2.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000026862	-	1958	-	ENSMAMP00000026189	182 (aa)	-	-
ENSMAMT00000026867	-	1872	-	ENSMAMP00000026194	182 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000017590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000017590's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000017590	-	74	34.074	ENSMAMG00000013273	-	52	34.074
ENSMAMG00000017590	-	90	34.524	ENSMAMG00000017614	-	58	34.524
ENSMAMG00000017590	-	74	40.741	ENSMAMG00000018079	-	54	40.741
ENSMAMG00000017590	-	76	41.727	ENSMAMG00000017874	-	52	41.727
ENSMAMG00000017590	-	92	42.857	ENSMAMG00000012463	-	70	43.114
ENSMAMG00000017590	-	91	41.317	ENSMAMG00000012460	-	53	41.317
ENSMAMG00000017590	-	98	32.778	ENSMAMG00000020006	-	56	33.929
ENSMAMG00000017590	-	92	34.118	ENSMAMG00000012622	-	54	34.118
ENSMAMG00000017590	-	93	33.333	ENSMAMG00000005365	-	52	33.526
ENSMAMG00000017590	-	95	83.815	ENSMAMG00000017671	-	55	83.815
ENSMAMG00000017590	-	91	35.503	ENSMAMG00000016065	-	56	35.503
ENSMAMG00000017590	-	72	37.313	ENSMAMG00000012570	-	77	37.313
ENSMAMG00000017590	-	99	95.580	ENSMAMG00000017624	-	60	95.580
ENSMAMG00000017590	-	85	36.306	ENSMAMG00000017892	-	52	36.306
ENSMAMG00000017590	-	97	35.393	ENSMAMG00000012600	-	52	35.393
ENSMAMG00000017590	-	99	35.669	ENSMAMG00000018061	-	54	35.669
ENSMAMG00000017590	-	81	35.811	ENSMAMG00000017680	-	52	35.811
ENSMAMG00000017590	-	99	90.608	ENSMAMG00000017606	-	60	90.608
ENSMAMG00000017590	-	83	32.903	ENSMAMG00000017660	-	57	32.903
ENSMAMG00000017590	-	80	34.932	ENSMAMG00000017666	-	52	34.932
ENSMAMG00000017590	-	95	40.116	ENSMAMG00000012448	-	55	40.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000017590	-	91	34.731	ENSACIG00000012718	-	65	34.731	Amphilophus_citrinellus
ENSMAMG00000017590	-	99	37.634	ENSAOCG00000002389	-	53	37.634	Amphiprion_ocellaris
ENSMAMG00000017590	-	95	37.952	ENSAOCG00000013686	-	67	37.952	Amphiprion_ocellaris
ENSMAMG00000017590	-	91	38.922	ENSAPEG00000021634	-	51	38.922	Amphiprion_percula
ENSMAMG00000017590	-	95	36.207	ENSACLG00000005066	-	58	36.207	Astatotilapia_calliptera
ENSMAMG00000017590	-	91	38.372	ENSAMXG00000037741	-	58	36.970	Astyanax_mexicanus
ENSMAMG00000017590	-	76	40.288	ENSAMXG00000030826	-	65	40.288	Astyanax_mexicanus
ENSMAMG00000017590	-	76	38.129	ENSAMXG00000036745	-	50	38.129	Astyanax_mexicanus
ENSMAMG00000017590	-	84	34.868	ENSAMXG00000039685	-	62	34.868	Astyanax_mexicanus
ENSMAMG00000017590	-	85	36.538	ENSCVAG00000023293	-	67	36.538	Cyprinodon_variegatus
ENSMAMG00000017590	-	90	33.533	ENSFHEG00000021828	-	69	33.533	Fundulus_heteroclitus
ENSMAMG00000017590	-	71	32.061	ENSGMOG00000006359	-	55	33.077	Gadus_morhua
ENSMAMG00000017590	-	85	45.223	ENSGACG00000002627	-	59	45.223	Gasterosteus_aculeatus
ENSMAMG00000017590	-	91	40.000	ENSHBUG00000000157	-	57	40.000	Haplochromis_burtoni
ENSMAMG00000017590	-	93	35.882	ENSHBUG00000020672	-	75	35.882	Haplochromis_burtoni
ENSMAMG00000017590	-	91	38.922	ENSHBUG00000003010	-	50	38.922	Haplochromis_burtoni
ENSMAMG00000017590	-	91	37.725	ENSHBUG00000002999	-	55	37.725	Haplochromis_burtoni
ENSMAMG00000017590	-	96	41.606	ENSLBEG00000010625	-	54	41.606	Labrus_bergylta
ENSMAMG00000017590	-	76	42.446	ENSLBEG00000006614	-	53	42.446	Labrus_bergylta
ENSMAMG00000017590	-	96	41.176	ENSLBEG00000017021	-	61	41.176	Labrus_bergylta
ENSMAMG00000017590	-	92	40.458	ENSLBEG00000028623	-	55	40.458	Labrus_bergylta
ENSMAMG00000017590	-	89	31.481	ENSLBEG00000003708	-	54	31.481	Labrus_bergylta
ENSMAMG00000017590	-	99	37.433	ENSMZEG00005002051	-	62	37.433	Maylandia_zebra
ENSMAMG00000017590	-	91	35.928	ENSMZEG00005021721	-	55	35.928	Maylandia_zebra
ENSMAMG00000017590	-	97	36.364	ENSMZEG00005027848	-	78	36.364	Maylandia_zebra
ENSMAMG00000017590	-	76	42.446	ENSMMOG00000010425	-	52	42.446	Mola_mola
ENSMAMG00000017590	-	95	39.080	ENSNBRG00000003060	-	53	38.764	Neolamprologus_brichardi
ENSMAMG00000017590	-	94	35.542	ENSONIG00000013819	-	59	35.542	Oreochromis_niloticus
ENSMAMG00000017590	-	91	42.963	ENSONIG00000012315	-	52	42.963	Oreochromis_niloticus
ENSMAMG00000017590	-	98	41.436	ENSONIG00000000233	-	51	41.436	Oreochromis_niloticus
ENSMAMG00000017590	-	84	41.727	ENSONIG00000004482	-	50	41.727	Oreochromis_niloticus
ENSMAMG00000017590	-	99	39.884	ENSONIG00000000314	-	68	39.884	Oreochromis_niloticus
ENSMAMG00000017590	-	95	38.728	ENSONIG00000014210	-	67	38.953	Oreochromis_niloticus
ENSMAMG00000017590	-	84	39.610	ENSPMGG00000002488	-	50	39.610	Periophthalmus_magnuspinnatus
ENSMAMG00000017590	-	80	41.429	ENSPFOG00000000217	-	55	41.429	Poecilia_formosa
ENSMAMG00000017590	-	92	40.769	ENSPFOG00000000259	-	61	40.769	Poecilia_formosa
ENSMAMG00000017590	-	73	40.602	ENSPLAG00000000053	-	74	40.602	Poecilia_latipinna
ENSMAMG00000017590	-	91	36.686	ENSPLAG00000000052	-	71	36.686	Poecilia_latipinna
ENSMAMG00000017590	-	85	37.580	ENSPREG00000018694	-	51	38.065	Poecilia_reticulata
ENSMAMG00000017590	-	91	38.182	ENSPNYG00000023994	-	56	38.182	Pundamilia_nyererei
ENSMAMG00000017590	-	82	42.667	ENSPNYG00000019890	-	52	42.667	Pundamilia_nyererei
ENSMAMG00000017590	-	86	40.741	ENSSMAG00000016994	-	65	40.741	Scophthalmus_maximus
ENSMAMG00000017590	-	96	35.329	ENSSDUG00000021006	-	69	36.196	Seriola_dumerili
ENSMAMG00000017590	-	75	41.606	ENSSDUG00000016459	-	50	41.606	Seriola_dumerili
ENSMAMG00000017590	-	77	43.262	ENSSDUG00000016612	-	64	43.262	Seriola_dumerili
ENSMAMG00000017590	-	76	41.727	ENSSLDG00000004473	-	53	41.727	Seriola_lalandi_dorsalis
ENSMAMG00000017590	-	76	42.446	ENSSLDG00000002744	-	63	42.446	Seriola_lalandi_dorsalis
ENSMAMG00000017590	-	80	37.931	ENSSLDG00000002339	-	51	37.931	Seriola_lalandi_dorsalis
ENSMAMG00000017590	-	95	37.576	ENSSLDG00000011692	-	75	37.576	Seriola_lalandi_dorsalis
ENSMAMG00000017590	-	76	43.885	ENSSLDG00000004233	-	50	34.225	Seriola_lalandi_dorsalis
ENSMAMG00000017590	-	91	33.696	ENSSLDG00000001533	-	64	33.696	Seriola_lalandi_dorsalis
ENSMAMG00000017590	-	92	36.686	ENSSPAG00000001365	-	58	36.686	Stegastes_partitus
ENSMAMG00000017590	-	89	37.576	ENSXCOG00000018711	-	54	37.576	Xiphophorus_couchianus