EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000017728 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 4205 bases
Position: chrOOHQ01000077.1:6291617-6295821
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000026427	RRM_1	PF00076.22	8.1e-32	1	2
ENSMAMP00000026427	RRM_1	PF00076.22	8.1e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000027103	-	798	-	ENSMAMP00000026427	265 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000017728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000017728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000017728	-	64	37.059	ENSMAMG00000020142	-	61	37.059
ENSMAMG00000017728	-	75	38.916	ENSMAMG00000018426	-	55	38.286
ENSMAMG00000017728	-	71	39.891	ENSMAMG00000002488	-	90	37.121
ENSMAMG00000017728	-	77	37.915	ENSMAMG00000004971	hnrnpd	54	44.000
ENSMAMG00000017728	-	71	38.251	ENSMAMG00000010503	msi2a	79	33.333
ENSMAMG00000017728	-	69	31.356	ENSMAMG00000009233	tardbpl	60	31.356
ENSMAMG00000017728	-	77	67.647	ENSMAMG00000017754	HNRNPA0	71	72.778
ENSMAMG00000017728	-	72	52.083	ENSMAMG00000006307	HNRNPA3	54	53.672
ENSMAMG00000017728	-	75	39.901	ENSMAMG00000002279	MSI1	50	40.230
ENSMAMG00000017728	-	77	52.885	ENSMAMG00000007606	-	52	54.802

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000017728	-	67	73.913	ENSAOCG00000015951	-	96	73.913	Amphiprion_ocellaris
ENSMAMG00000017728	-	74	95.385	ENSAOCG00000015914	-	70	95.361	Amphiprion_ocellaris
ENSMAMG00000017728	-	67	73.913	ENSAPEG00000002274	-	96	73.913	Amphiprion_percula
ENSMAMG00000017728	-	74	95.385	ENSAPEG00000002224	-	81	95.361	Amphiprion_percula
ENSMAMG00000017728	-	73	93.782	ENSACLG00000008978	-	89	93.299	Astatotilapia_calliptera
ENSMAMG00000017728	-	74	90.256	ENSCVAG00000008324	-	84	90.722	Cyprinodon_variegatus
ENSMAMG00000017728	-	67	46.023	FBgn0004237	Hrb87F	59	42.731	Drosophila_melanogaster
ENSMAMG00000017728	-	66	36.508	ENSEBUG00000010003	-	81	38.202	Eptatretus_burgeri
ENSMAMG00000017728	-	67	74.545	ENSELUG00000014407	-	98	74.545	Esox_lucius
ENSMAMG00000017728	-	73	93.782	ENSHBUG00000023867	-	89	93.299	Haplochromis_burtoni
ENSMAMG00000017728	-	68	78.771	ENSHCOG00000007180	-	76	78.771	Hippocampus_comes
ENSMAMG00000017728	-	67	88.554	ENSLBEG00000006362	-	79	88.554	Labrus_bergylta
ENSMAMG00000017728	-	61	74.107	ENSLOCG00000012121	-	65	74.107	Lepisosteus_oculatus
ENSMAMG00000017728	-	68	93.370	ENSMZEG00005001063	-	81	93.889	Maylandia_zebra
ENSMAMG00000017728	-	67	72.840	ENSMMOG00000004242	-	98	72.840	Mola_mola
ENSMAMG00000017728	-	78	38.565	ENSMEUG00000003051	-	56	42.458	Notamacropus_eugenii
ENSMAMG00000017728	-	68	58.659	ENSORLG00000023542	-	61	59.770	Oryzias_latipes
ENSMAMG00000017728	-	99	46.442	ENSORLG00000030284	-	63	55.303	Oryzias_latipes
ENSMAMG00000017728	-	69	58.242	ENSORLG00000023176	-	59	59.322	Oryzias_latipes
ENSMAMG00000017728	-	67	56.647	ENSORLG00020006029	-	60	56.647	Oryzias_latipes_hni
ENSMAMG00000017728	-	67	90.805	ENSORLG00020007171	-	97	90.805	Oryzias_latipes_hni
ENSMAMG00000017728	-	67	56.970	ENSORLG00020007084	-	77	56.970	Oryzias_latipes_hni
ENSMAMG00000017728	-	67	61.111	ENSOMEG00000002000	-	65	61.111	Oryzias_melastigma
ENSMAMG00000017728	-	79	54.595	ENSOMEG00000002509	-	76	56.322	Oryzias_melastigma
ENSMAMG00000017728	-	79	54.545	ENSOMEG00000023475	-	67	55.357	Oryzias_melastigma
ENSMAMG00000017728	-	70	53.723	ENSOMEG00000021030	-	68	54.444	Oryzias_melastigma
ENSMAMG00000017728	-	96	48.872	ENSOMEG00000006903	-	69	55.000	Oryzias_melastigma
ENSMAMG00000017728	-	67	51.205	ENSOMEG00000009566	-	87	51.205	Oryzias_melastigma
ENSMAMG00000017728	-	94	43.023	ENSOMEG00000002084	-	70	63.415	Oryzias_melastigma
ENSMAMG00000017728	-	70	54.545	ENSOMEG00000012368	-	67	55.000	Oryzias_melastigma
ENSMAMG00000017728	-	65	49.425	ENSOMEG00000006327	-	60	49.425	Oryzias_melastigma
ENSMAMG00000017728	-	74	90.256	ENSPREG00000010603	-	64	90.722	Poecilia_reticulata
ENSMAMG00000017728	-	73	93.782	ENSPNYG00000020763	-	89	93.299	Pundamilia_nyererei
ENSMAMG00000017728	-	66	72.050	ENSPNAG00000018051	-	81	72.050	Pygocentrus_nattereri
ENSMAMG00000017728	-	67	60.674	ENSSHAG00000015609	-	81	60.674	Sarcophilus_harrisii
ENSMAMG00000017728	-	67	96.386	ENSSDUG00000002394	-	87	96.386	Seriola_dumerili
ENSMAMG00000017728	-	68	73.077	ENSSLDG00000024685	-	88	73.077	Seriola_lalandi_dorsalis