EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000017900 (Gene tree)
Gene ID: 113123950
Gene Symbol: si:ch1073-55a19.2
Alias: -
Full Name: ranBP2-like and GRIP domain-containing protein 3
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 26210 bases
Position: chrOOHQ01000093.1:10227621-10253830
Accession: 113123950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000026666	zf-RanBP	PF00641.18	4.2e-28	1	4
ENSMAMP00000026666	zf-RanBP	PF00641.18	4.2e-28	2	4
ENSMAMP00000026666	zf-RanBP	PF00641.18	4.2e-28	3	4
ENSMAMP00000026666	zf-RanBP	PF00641.18	4.2e-28	4	4
ENSMAMP00000026646	zf-RanBP	PF00641.18	4.2e-28	1	4
ENSMAMP00000026646	zf-RanBP	PF00641.18	4.2e-28	2	4
ENSMAMP00000026646	zf-RanBP	PF00641.18	4.2e-28	3	4
ENSMAMP00000026646	zf-RanBP	PF00641.18	4.2e-28	4	4
ENSMAMP00000026631	zf-RanBP	PF00641.18	4.4e-28	1	4
ENSMAMP00000026631	zf-RanBP	PF00641.18	4.4e-28	2	4
ENSMAMP00000026631	zf-RanBP	PF00641.18	4.4e-28	3	4
ENSMAMP00000026631	zf-RanBP	PF00641.18	4.4e-28	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000027349	-	14271	-	ENSMAMP00000026666	2976 (aa)	-	-
ENSMAMT00000027313	-	14358	-	ENSMAMP00000026631	3005 (aa)	XP_026152137	UPI000E45BC06
ENSMAMT00000027328	-	14280	-	ENSMAMP00000026646	2979 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000017900's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000017900's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000017900	si:ch1073-55a19.2	100	54.135	ENSG00000153201	RANBP2	90	69.565	Homo_sapiens
ENSMAMG00000017900	si:ch1073-55a19.2	100	82.584	ENSAPOG00000017146	si:ch1073-55a19.2	100	82.432	Acanthochromis_polyacanthus
ENSMAMG00000017900	si:ch1073-55a19.2	99	54.135	ENSAMEG00000013078	RANBP2	100	53.571	Ailuropoda_melanoleuca
ENSMAMG00000017900	si:ch1073-55a19.2	100	74.566	ENSACIG00000001203	si:ch1073-55a19.2	100	74.933	Amphilophus_citrinellus
ENSMAMG00000017900	si:ch1073-55a19.2	100	83.274	ENSAPEG00000012495	si:ch1073-55a19.2	100	82.586	Amphiprion_percula
ENSMAMG00000017900	si:ch1073-55a19.2	100	82.961	ENSATEG00000001716	si:ch1073-55a19.2	100	82.436	Anabas_testudineus
ENSMAMG00000017900	si:ch1073-55a19.2	95	51.601	ENSACAG00000002091	RANBP2	100	51.534	Anolis_carolinensis
ENSMAMG00000017900	si:ch1073-55a19.2	100	49.907	ENSANAG00000023124	RANBP2	100	55.396	Aotus_nancymaae
ENSMAMG00000017900	si:ch1073-55a19.2	100	79.311	ENSACLG00000020500	si:ch1073-55a19.2	100	78.759	Astatotilapia_calliptera
ENSMAMG00000017900	si:ch1073-55a19.2	100	54.688	ENSBTAG00000000152	RANBP2	100	53.978	Bos_taurus
ENSMAMG00000017900	si:ch1073-55a19.2	100	53.383	ENSCJAG00000001189	RANBP2	100	52.857	Callithrix_jacchus
ENSMAMG00000017900	si:ch1073-55a19.2	99	73.203	ENSCAFG00000023061	RANBP2	100	73.203	Canis_familiaris
ENSMAMG00000017900	si:ch1073-55a19.2	100	54.135	ENSCAFG00020009314	RANBP2	100	53.571	Canis_lupus_dingo
ENSMAMG00000017900	si:ch1073-55a19.2	100	51.061	ENSCHIG00000012686	RANBP2	100	50.917	Capra_hircus
ENSMAMG00000017900	si:ch1073-55a19.2	99	50.610	ENSTSYG00000001656	RANBP2	100	50.110	Carlito_syrichta
ENSMAMG00000017900	si:ch1073-55a19.2	98	54.135	ENSCAPG00000010687	RANBP2	100	53.571	Cavia_aperea
ENSMAMG00000017900	si:ch1073-55a19.2	100	50.473	ENSCPOG00000000392	RANBP2	100	53.571	Cavia_porcellus
ENSMAMG00000017900	si:ch1073-55a19.2	100	53.383	ENSCCAG00000028166	RANBP2	100	52.857	Cebus_capucinus
ENSMAMG00000017900	si:ch1073-55a19.2	100	54.135	ENSCATG00000032597	RANBP2	100	53.571	Cercocebus_atys
ENSMAMG00000017900	si:ch1073-55a19.2	100	51.148	ENSCLAG00000010533	RANBP2	100	53.571	Chinchilla_lanigera
ENSMAMG00000017900	si:ch1073-55a19.2	100	54.135	ENSCSAG00000017019	RANBP2	100	53.571	Chlorocebus_sabaeus
ENSMAMG00000017900	si:ch1073-55a19.2	63	66.000	ENSCHOG00000012659	-	57	77.778	Choloepus_hoffmanni
ENSMAMG00000017900	si:ch1073-55a19.2	100	52.279	ENSCPBG00000006985	RANBP2	100	54.286	Chrysemys_picta_bellii
ENSMAMG00000017900	si:ch1073-55a19.2	95	56.593	ENSCANG00000041469	RANBP2	100	56.593	Colobus_angolensis_palliatus
ENSMAMG00000017900	si:ch1073-55a19.2	100	50.626	ENSCGRG00001000642	Ranbp2	100	54.286	Cricetulus_griseus_chok1gshd
ENSMAMG00000017900	si:ch1073-55a19.2	100	50.376	ENSCGRG00000008995	Ranbp2	100	54.286	Cricetulus_griseus_crigri
ENSMAMG00000017900	si:ch1073-55a19.2	100	72.255	ENSCSEG00000013280	si:ch1073-55a19.2	100	72.092	Cynoglossus_semilaevis
ENSMAMG00000017900	si:ch1073-55a19.2	100	75.253	ENSCVAG00000016050	si:ch1073-55a19.2	100	72.033	Cyprinodon_variegatus
ENSMAMG00000017900	si:ch1073-55a19.2	100	57.866	ENSDARG00000093125	RANBP2	100	55.965	Danio_rerio
ENSMAMG00000017900	si:ch1073-55a19.2	99	49.035	ENSDNOG00000040501	RANBP2	99	53.571	Dasypus_novemcinctus
ENSMAMG00000017900	si:ch1073-55a19.2	100	51.746	ENSDORG00000002206	Ranbp2	100	51.659	Dipodomys_ordii
ENSMAMG00000017900	si:ch1073-55a19.2	74	57.160	ENSETEG00000008891	-	66	56.557	Echinops_telfairi
ENSMAMG00000017900	si:ch1073-55a19.2	99	53.533	ENSEBUG00000010057	si:ch1073-55a19.2	85	52.899	Eptatretus_burgeri
ENSMAMG00000017900	si:ch1073-55a19.2	100	54.135	ENSEASG00005012918	RANBP2	100	53.571	Equus_asinus_asinus
ENSMAMG00000017900	si:ch1073-55a19.2	100	54.135	ENSECAG00000008458	RANBP2	96	54.454	Equus_caballus
ENSMAMG00000017900	si:ch1073-55a19.2	80	62.100	ENSEEUG00000007806	RANBP2	79	62.100	Erinaceus_europaeus
ENSMAMG00000017900	si:ch1073-55a19.2	99	70.272	ENSELUG00000007763	si:ch1073-55a19.2	96	69.936	Esox_lucius
ENSMAMG00000017900	si:ch1073-55a19.2	99	50.903	ENSFALG00000003519	RANBP2	99	50.321	Ficedula_albicollis
ENSMAMG00000017900	si:ch1073-55a19.2	100	49.451	ENSFDAG00000016912	RANBP2	100	53.571	Fukomys_damarensis
ENSMAMG00000017900	si:ch1073-55a19.2	100	73.190	ENSFHEG00000009774	si:ch1073-55a19.2	100	73.222	Fundulus_heteroclitus
ENSMAMG00000017900	si:ch1073-55a19.2	98	64.776	ENSGMOG00000007071	si:ch1073-55a19.2	96	65.949	Gadus_morhua
ENSMAMG00000017900	si:ch1073-55a19.2	100	73.590	ENSGAFG00000010966	si:ch1073-55a19.2	100	73.329	Gambusia_affinis
ENSMAMG00000017900	si:ch1073-55a19.2	100	74.445	ENSGACG00000006831	si:ch1073-55a19.2	100	75.227	Gasterosteus_aculeatus
ENSMAMG00000017900	si:ch1073-55a19.2	93	53.705	ENSGAGG00000025039	RANBP2	99	51.880	Gopherus_agassizii
ENSMAMG00000017900	si:ch1073-55a19.2	100	79.007	ENSHBUG00000000053	si:ch1073-55a19.2	100	78.780	Haplochromis_burtoni
ENSMAMG00000017900	si:ch1073-55a19.2	100	50.799	ENSHGLG00000018887	RANBP2	100	54.286	Heterocephalus_glaber_female
ENSMAMG00000017900	si:ch1073-55a19.2	100	50.565	ENSHGLG00100007365	RANBP2	100	54.286	Heterocephalus_glaber_male
ENSMAMG00000017900	si:ch1073-55a19.2	100	73.034	ENSHCOG00000019596	si:ch1073-55a19.2	100	73.781	Hippocampus_comes
ENSMAMG00000017900	si:ch1073-55a19.2	100	58.922	ENSIPUG00000019614	si:ch1073-55a19.2	100	59.723	Ictalurus_punctatus
ENSMAMG00000017900	si:ch1073-55a19.2	100	50.711	ENSSTOG00000019518	RANBP2	100	53.571	Ictidomys_tridecemlineatus
ENSMAMG00000017900	si:ch1073-55a19.2	100	51.524	ENSJJAG00000021292	Ranbp2	100	50.695	Jaculus_jaculus
ENSMAMG00000017900	si:ch1073-55a19.2	100	77.528	ENSKMAG00000001158	si:ch1073-55a19.2	100	77.147	Kryptolebias_marmoratus
ENSMAMG00000017900	si:ch1073-55a19.2	94	78.785	ENSLBEG00000027979	si:ch1073-55a19.2	99	78.395	Labrus_bergylta
ENSMAMG00000017900	si:ch1073-55a19.2	100	52.125	ENSLACG00000009728	RANBP2	100	52.030	Latimeria_chalumnae
ENSMAMG00000017900	si:ch1073-55a19.2	100	60.302	ENSLOCG00000010333	si:ch1073-55a19.2	100	60.154	Lepisosteus_oculatus
ENSMAMG00000017900	si:ch1073-55a19.2	100	51.505	ENSLAFG00000000740	RANBP2	100	51.961	Loxodonta_africana
ENSMAMG00000017900	si:ch1073-55a19.2	100	54.135	ENSMFAG00000029029	RANBP2	100	53.571	Macaca_fascicularis
ENSMAMG00000017900	si:ch1073-55a19.2	100	54.135	ENSMMUG00000021019	RANBP2	100	53.571	Macaca_mulatta
ENSMAMG00000017900	si:ch1073-55a19.2	100	54.135	ENSMNEG00000043706	RANBP2	100	53.571	Macaca_nemestrina
ENSMAMG00000017900	si:ch1073-55a19.2	99	54.135	ENSMLEG00000037350	RANBP2	100	53.571	Mandrillus_leucophaeus
ENSMAMG00000017900	si:ch1073-55a19.2	100	79.344	ENSMZEG00005010956	si:ch1073-55a19.2	100	78.857	Maylandia_zebra
ENSMAMG00000017900	si:ch1073-55a19.2	99	48.825	ENSMGAG00000014831	-	99	48.428	Meleagris_gallopavo
ENSMAMG00000017900	si:ch1073-55a19.2	100	50.943	ENSMAUG00000013313	Ranbp2	100	54.286	Mesocricetus_auratus
ENSMAMG00000017900	si:ch1073-55a19.2	100	51.646	ENSMICG00000011864	RANBP2	99	53.237	Microcebus_murinus
ENSMAMG00000017900	si:ch1073-55a19.2	100	51.198	ENSMOCG00000012516	Ranbp2	100	54.286	Microtus_ochrogaster
ENSMAMG00000017900	si:ch1073-55a19.2	98	83.206	ENSMMOG00000005743	si:ch1073-55a19.2	99	83.206	Mola_mola
ENSMAMG00000017900	si:ch1073-55a19.2	97	53.831	ENSMODG00000002914	RANBP2	100	53.595	Monodelphis_domestica
ENSMAMG00000017900	si:ch1073-55a19.2	100	82.494	ENSMALG00000004359	si:ch1073-55a19.2	100	81.803	Monopterus_albus
ENSMAMG00000017900	si:ch1073-55a19.2	55	50.762	ENSMUSG00000003226	Ranbp2	100	50.944	Mus_musculus
ENSMAMG00000017900	si:ch1073-55a19.2	100	50.267	MGP_PahariEiJ_G0030751	Ranbp2	100	48.970	Mus_pahari
ENSMAMG00000017900	si:ch1073-55a19.2	55	50.762	MGP_SPRETEiJ_G0016147	Ranbp2	100	51.059	Mus_spretus
ENSMAMG00000017900	si:ch1073-55a19.2	100	61.702	ENSMPUG00000010754	RANBP2	100	49.742	Mustela_putorius_furo
ENSMAMG00000017900	si:ch1073-55a19.2	99	54.135	ENSMLUG00000005555	RANBP2	100	53.571	Myotis_lucifugus
ENSMAMG00000017900	si:ch1073-55a19.2	100	50.748	ENSNGAG00000016154	Ranbp2	100	53.571	Nannospalax_galili
ENSMAMG00000017900	si:ch1073-55a19.2	100	79.014	ENSNBRG00000004587	si:ch1073-55a19.2	100	78.754	Neolamprologus_brichardi
ENSMAMG00000017900	si:ch1073-55a19.2	99	54.887	ENSNLEG00000007501	RANBP2	99	54.286	Nomascus_leucogenys
ENSMAMG00000017900	si:ch1073-55a19.2	91	54.240	ENSOPRG00000009720	-	94	54.240	Ochotona_princeps
ENSMAMG00000017900	si:ch1073-55a19.2	100	50.980	ENSODEG00000013212	RANBP2	100	53.571	Octodon_degus
ENSMAMG00000017900	si:ch1073-55a19.2	100	76.571	ENSONIG00000004346	si:ch1073-55a19.2	100	76.370	Oreochromis_niloticus
ENSMAMG00000017900	si:ch1073-55a19.2	79	49.324	ENSOANG00000004894	RANBP2	82	52.143	Ornithorhynchus_anatinus
ENSMAMG00000017900	si:ch1073-55a19.2	100	50.109	ENSOCUG00000001165	RANBP2	100	49.720	Oryctolagus_cuniculus
ENSMAMG00000017900	si:ch1073-55a19.2	100	71.135	ENSORLG00000015523	si:ch1073-55a19.2	100	71.316	Oryzias_latipes
ENSMAMG00000017900	si:ch1073-55a19.2	100	73.097	ENSORLG00020003797	si:ch1073-55a19.2	100	72.757	Oryzias_latipes_hni
ENSMAMG00000017900	si:ch1073-55a19.2	100	73.114	ENSORLG00015004994	si:ch1073-55a19.2	100	72.822	Oryzias_latipes_hsok
ENSMAMG00000017900	si:ch1073-55a19.2	100	72.498	ENSOMEG00000022969	si:ch1073-55a19.2	100	72.447	Oryzias_melastigma
ENSMAMG00000017900	si:ch1073-55a19.2	100	50.988	ENSOGAG00000028976	RANBP2	100	50.113	Otolemur_garnettii
ENSMAMG00000017900	si:ch1073-55a19.2	99	50.969	ENSOARG00000000558	RANBP2	99	50.779	Ovis_aries
ENSMAMG00000017900	si:ch1073-55a19.2	98	65.686	ENSPANG00000000990	RANBP2	99	65.686	Papio_anubis
ENSMAMG00000017900	si:ch1073-55a19.2	100	61.916	ENSPKIG00000010971	RANBP2	100	62.448	Paramormyrops_kingsleyae
ENSMAMG00000017900	si:ch1073-55a19.2	94	49.253	ENSPKIG00000021054	-	99	54.225	Paramormyrops_kingsleyae
ENSMAMG00000017900	si:ch1073-55a19.2	99	51.657	ENSPSIG00000007182	RANBP2	61	50.085	Pelodiscus_sinensis
ENSMAMG00000017900	si:ch1073-55a19.2	93	50.233	ENSPEMG00000021565	Ranbp2	97	54.286	Peromyscus_maniculatus_bairdii
ENSMAMG00000017900	si:ch1073-55a19.2	85	61.719	ENSPMAG00000007195	si:ch1073-55a19.2	100	59.124	Petromyzon_marinus
ENSMAMG00000017900	si:ch1073-55a19.2	100	55.357	ENSPCIG00000013912	RANBP2	100	55.357	Phascolarctos_cinereus
ENSMAMG00000017900	si:ch1073-55a19.2	100	72.719	ENSPFOG00000007377	si:ch1073-55a19.2	100	72.053	Poecilia_formosa
ENSMAMG00000017900	si:ch1073-55a19.2	100	73.128	ENSPLAG00000012373	si:ch1073-55a19.2	100	72.618	Poecilia_latipinna
ENSMAMG00000017900	si:ch1073-55a19.2	100	73.018	ENSPMEG00000005561	si:ch1073-55a19.2	100	72.574	Poecilia_mexicana
ENSMAMG00000017900	si:ch1073-55a19.2	99	82.199	ENSPREG00000013331	si:ch1073-55a19.2	100	72.615	Poecilia_reticulata
ENSMAMG00000017900	si:ch1073-55a19.2	70	54.135	ENSPPYG00000012139	-	100	53.571	Pongo_abelii
ENSMAMG00000017900	si:ch1073-55a19.2	52	59.685	ENSPPYG00000029793	-	99	60.000	Pongo_abelii
ENSMAMG00000017900	si:ch1073-55a19.2	95	66.044	ENSPCAG00000000957	RANBP2	98	65.421	Procavia_capensis
ENSMAMG00000017900	si:ch1073-55a19.2	100	54.135	ENSPCOG00000008879	RANBP2	99	53.571	Propithecus_coquereli
ENSMAMG00000017900	si:ch1073-55a19.2	97	56.364	ENSPVAG00000003883	RANBP2	93	56.364	Pteropus_vampyrus
ENSMAMG00000017900	si:ch1073-55a19.2	100	79.007	ENSPNYG00000015971	si:ch1073-55a19.2	100	78.780	Pundamilia_nyererei
ENSMAMG00000017900	si:ch1073-55a19.2	100	63.077	ENSPNAG00000026129	si:ch1073-55a19.2	100	63.952	Pygocentrus_nattereri
ENSMAMG00000017900	si:ch1073-55a19.2	100	50.423	ENSRNOG00000000796	Ranbp2	100	55.000	Rattus_norvegicus
ENSMAMG00000017900	si:ch1073-55a19.2	100	53.383	ENSRBIG00000043515	RANBP2	100	52.857	Rhinopithecus_bieti
ENSMAMG00000017900	si:ch1073-55a19.2	100	53.383	ENSRROG00000026113	RANBP2	100	52.857	Rhinopithecus_roxellana
ENSMAMG00000017900	si:ch1073-55a19.2	100	54.135	ENSSBOG00000035336	RANBP2	100	53.571	Saimiri_boliviensis_boliviensis
ENSMAMG00000017900	si:ch1073-55a19.2	99	52.087	ENSSHAG00000004676	RANBP2	99	51.722	Sarcophilus_harrisii
ENSMAMG00000017900	si:ch1073-55a19.2	100	60.326	ENSSFOG00015023201	RANBP2	100	60.137	Scleropages_formosus
ENSMAMG00000017900	si:ch1073-55a19.2	99	63.642	ENSSFOG00015003943	-	99	63.586	Scleropages_formosus
ENSMAMG00000017900	si:ch1073-55a19.2	100	81.738	ENSSMAG00000007331	si:ch1073-55a19.2	100	81.477	Scophthalmus_maximus
ENSMAMG00000017900	si:ch1073-55a19.2	100	84.758	ENSSDUG00000013160	si:ch1073-55a19.2	100	84.508	Seriola_dumerili
ENSMAMG00000017900	si:ch1073-55a19.2	100	80.927	ENSSLDG00000023392	si:ch1073-55a19.2	100	79.103	Seriola_lalandi_dorsalis
ENSMAMG00000017900	si:ch1073-55a19.2	89	57.888	ENSSARG00000005595	RANBP2	73	57.572	Sorex_araneus
ENSMAMG00000017900	si:ch1073-55a19.2	100	83.290	ENSSPAG00000008000	si:ch1073-55a19.2	100	82.672	Stegastes_partitus
ENSMAMG00000017900	si:ch1073-55a19.2	99	55.717	ENSSSCG00000008136	RANBP2	98	51.061	Sus_scrofa
ENSMAMG00000017900	si:ch1073-55a19.2	98	52.212	ENSTGUG00000009571	RANBP2	100	51.779	Taeniopygia_guttata
ENSMAMG00000017900	si:ch1073-55a19.2	94	52.436	ENSTTRG00000007400	RANBP2	96	53.571	Tursiops_truncatus
ENSMAMG00000017900	si:ch1073-55a19.2	95	54.135	ENSUAMG00000020025	RANBP2	99	53.571	Ursus_americanus
ENSMAMG00000017900	si:ch1073-55a19.2	98	57.778	ENSVPAG00000006676	RANBP2	94	51.429	Vicugna_pacos
ENSMAMG00000017900	si:ch1073-55a19.2	92	67.476	ENSVVUG00000014899	RANBP2	99	65.049	Vulpes_vulpes
ENSMAMG00000017900	si:ch1073-55a19.2	94	50.639	ENSXETG00000016006	ranbp2	100	49.798	Xenopus_tropicalis
ENSMAMG00000017900	si:ch1073-55a19.2	99	73.667	ENSXCOG00000000752	si:ch1073-55a19.2	99	72.623	Xiphophorus_couchianus
ENSMAMG00000017900	si:ch1073-55a19.2	99	81.679	ENSXMAG00000003519	si:ch1073-55a19.2	100	73.674	Xiphophorus_maculatus