EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000017918 (Gene tree)
Gene ID: 113145235
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 8168 bases
Position: chrOOHQ01000107.1:33132965-33141132
Accession: 113145235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000026648	AARP2CN	PF08142.12	1.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000027330	-	2903	XM_026331701	ENSMAMP00000026648	842 (aa)	XP_026187486	UPI000E45D328

Gene Model

Click here to download ENSMAMG00000017918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000017918's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000017918	tsr1	97	54.655	ENSG00000167721	TSR1	98	55.260	Homo_sapiens
ENSMAMG00000017918	tsr1	99	88.375	ENSAPOG00000020891	tsr1	100	87.530	Acanthochromis_polyacanthus
ENSMAMG00000017918	tsr1	99	54.012	ENSAMEG00000007599	TSR1	99	53.413	Ailuropoda_melanoleuca
ENSMAMG00000017918	tsr1	99	83.671	ENSACIG00000007090	tsr1	100	83.433	Amphilophus_citrinellus
ENSMAMG00000017918	tsr1	99	88.452	ENSAOCG00000023284	tsr1	100	87.485	Amphiprion_ocellaris
ENSMAMG00000017918	tsr1	93	87.995	ENSAPEG00000008452	tsr1	100	87.596	Amphiprion_percula
ENSMAMG00000017918	tsr1	99	87.008	ENSATEG00000021961	tsr1	100	87.857	Anabas_testudineus
ENSMAMG00000017918	tsr1	91	57.532	ENSAPLG00000013422	TSR1	100	56.404	Anas_platyrhynchos
ENSMAMG00000017918	tsr1	71	50.577	ENSACAG00000000859	TSR1	92	48.600	Anolis_carolinensis
ENSMAMG00000017918	tsr1	97	54.897	ENSANAG00000031071	TSR1	98	55.139	Aotus_nancymaae
ENSMAMG00000017918	tsr1	100	85.154	ENSACLG00000007595	tsr1	100	84.561	Astatotilapia_calliptera
ENSMAMG00000017918	tsr1	50	75.714	ENSAMXG00000008470	tsr1	91	75.291	Astyanax_mexicanus
ENSMAMG00000017918	tsr1	98	54.719	ENSBTAG00000004225	TSR1	99	55.317	Bos_taurus
ENSMAMG00000017918	tsr1	97	53.893	ENSCJAG00000012456	TSR1	98	54.136	Callithrix_jacchus
ENSMAMG00000017918	tsr1	99	54.545	ENSCAFG00000002106	-	99	54.545	Canis_familiaris
ENSMAMG00000017918	tsr1	89	52.375	ENSCAFG00000019273	-	100	56.332	Canis_familiaris
ENSMAMG00000017918	tsr1	99	54.426	ENSCAFG00020009728	TSR1	99	54.426	Canis_lupus_dingo
ENSMAMG00000017918	tsr1	99	55.689	ENSCHIG00000023935	TSR1	99	55.609	Capra_hircus
ENSMAMG00000017918	tsr1	99	55.090	ENSTSYG00000005468	TSR1	99	54.491	Carlito_syrichta
ENSMAMG00000017918	tsr1	92	54.768	ENSCPOG00000014833	TSR1	99	54.300	Cavia_porcellus
ENSMAMG00000017918	tsr1	92	53.282	ENSCCAG00000028962	TSR1	98	53.411	Cebus_capucinus
ENSMAMG00000017918	tsr1	98	54.524	ENSCATG00000044262	TSR1	99	55.127	Cercocebus_atys
ENSMAMG00000017918	tsr1	99	55.090	ENSCLAG00000005567	TSR1	99	54.535	Chinchilla_lanigera
ENSMAMG00000017918	tsr1	98	54.644	ENSCSAG00000013788	TSR1	99	55.247	Chlorocebus_sabaeus
ENSMAMG00000017918	tsr1	98	56.490	ENSCPBG00000020363	TSR1	98	55.948	Chrysemys_picta_bellii
ENSMAMG00000017918	tsr1	96	44.053	ENSCING00000020658	-	99	43.689	Ciona_intestinalis
ENSMAMG00000017918	tsr1	95	43.804	ENSCSAVG00000001875	-	100	43.681	Ciona_savignyi
ENSMAMG00000017918	tsr1	98	49.819	ENSCANG00000033056	TSR1	95	69.697	Colobus_angolensis_palliatus
ENSMAMG00000017918	tsr1	99	51.794	ENSCGRG00000013015	Tsr1	99	51.371	Cricetulus_griseus_crigri
ENSMAMG00000017918	tsr1	99	80.453	ENSCSEG00000013009	tsr1	100	80.691	Cynoglossus_semilaevis
ENSMAMG00000017918	tsr1	99	84.148	ENSCVAG00000000506	tsr1	100	83.433	Cyprinodon_variegatus
ENSMAMG00000017918	tsr1	99	75.237	ENSDARG00000007744	tsr1	100	75.474	Danio_rerio
ENSMAMG00000017918	tsr1	99	54.970	ENSDNOG00000004715	TSR1	99	56.583	Dasypus_novemcinctus
ENSMAMG00000017918	tsr1	99	54.731	ENSDORG00000016371	-	99	53.461	Dipodomys_ordii
ENSMAMG00000017918	tsr1	96	43.659	FBgn0037073	Tsr1	96	42.525	Drosophila_melanogaster
ENSMAMG00000017918	tsr1	85	67.541	ENSETEG00000017534	TSR1	89	67.541	Echinops_telfairi
ENSMAMG00000017918	tsr1	94	51.131	ENSEBUG00000013731	TSR1	97	49.749	Eptatretus_burgeri
ENSMAMG00000017918	tsr1	99	55.083	ENSEASG00005009302	TSR1	98	54.846	Equus_asinus_asinus
ENSMAMG00000017918	tsr1	99	54.436	ENSECAG00000009114	TSR1	99	55.036	Equus_caballus
ENSMAMG00000017918	tsr1	100	76.394	ENSELUG00000020984	tsr1	96	76.631	Esox_lucius
ENSMAMG00000017918	tsr1	99	53.597	ENSFCAG00000006313	TSR1	99	54.002	Felis_catus
ENSMAMG00000017918	tsr1	99	57.583	ENSFALG00000006532	TSR1	99	56.440	Ficedula_albicollis
ENSMAMG00000017918	tsr1	99	54.317	ENSFDAG00000006038	TSR1	99	53.883	Fukomys_damarensis
ENSMAMG00000017918	tsr1	100	82.722	ENSFHEG00000003626	tsr1	100	82.840	Fundulus_heteroclitus
ENSMAMG00000017918	tsr1	99	72.479	ENSGMOG00000010336	tsr1	100	71.886	Gadus_morhua
ENSMAMG00000017918	tsr1	100	81.732	ENSGAFG00000012993	tsr1	100	81.376	Gambusia_affinis
ENSMAMG00000017918	tsr1	99	81.538	ENSGACG00000010843	tsr1	100	81.775	Gasterosteus_aculeatus
ENSMAMG00000017918	tsr1	98	56.130	ENSGAGG00000025619	-	99	55.385	Gopherus_agassizii
ENSMAMG00000017918	tsr1	97	54.776	ENSGGOG00000001704	TSR1	98	55.502	Gorilla_gorilla
ENSMAMG00000017918	tsr1	100	85.629	ENSHBUG00000017904	tsr1	100	85.036	Haplochromis_burtoni
ENSMAMG00000017918	tsr1	96	48.886	ENSHGLG00000015688	-	98	47.896	Heterocephalus_glaber_female
ENSMAMG00000017918	tsr1	99	54.773	ENSHGLG00000012806	-	99	54.773	Heterocephalus_glaber_female
ENSMAMG00000017918	tsr1	99	54.773	ENSHGLG00100015392	TSR1	99	54.773	Heterocephalus_glaber_male
ENSMAMG00000017918	tsr1	99	80.930	ENSHCOG00000001432	tsr1	100	81.049	Hippocampus_comes
ENSMAMG00000017918	tsr1	99	74.171	ENSIPUG00000004618	tsr1	100	73.815	Ictalurus_punctatus
ENSMAMG00000017918	tsr1	99	54.970	ENSSTOG00000011819	TSR1	99	55.728	Ictidomys_tridecemlineatus
ENSMAMG00000017918	tsr1	91	53.506	ENSJJAG00000019505	Tsr1	95	52.338	Jaculus_jaculus
ENSMAMG00000017918	tsr1	100	83.254	ENSKMAG00000005763	tsr1	100	83.492	Kryptolebias_marmoratus
ENSMAMG00000017918	tsr1	100	87.189	ENSLBEG00000021823	tsr1	100	86.358	Labrus_bergylta
ENSMAMG00000017918	tsr1	99	57.176	ENSLACG00000002197	TSR1	100	56.706	Latimeria_chalumnae
ENSMAMG00000017918	tsr1	93	80.263	ENSLOCG00000006491	TSR1	99	80.263	Lepisosteus_oculatus
ENSMAMG00000017918	tsr1	99	54.415	ENSMFAG00000021330	TSR1	99	55.368	Macaca_fascicularis
ENSMAMG00000017918	tsr1	99	54.296	ENSMMUG00000017519	TSR1	99	55.247	Macaca_mulatta
ENSMAMG00000017918	tsr1	99	54.296	ENSMNEG00000031382	TSR1	99	55.247	Macaca_nemestrina
ENSMAMG00000017918	tsr1	98	54.403	ENSMLEG00000036733	TSR1	99	55.006	Mandrillus_leucophaeus
ENSMAMG00000017918	tsr1	99	84.881	ENSMZEG00005007477	tsr1	100	84.286	Maylandia_zebra
ENSMAMG00000017918	tsr1	99	56.280	ENSMGAG00000005576	TSR1	100	55.687	Meleagris_gallopavo
ENSMAMG00000017918	tsr1	99	55.383	ENSMICG00000012943	TSR1	99	55.185	Microcebus_murinus
ENSMAMG00000017918	tsr1	99	53.754	ENSMOCG00000022764	Tsr1	99	53.919	Microtus_ochrogaster
ENSMAMG00000017918	tsr1	99	85.936	ENSMMOG00000014280	tsr1	100	85.221	Mola_mola
ENSMAMG00000017918	tsr1	97	56.438	ENSMODG00000010658	TSR1	99	55.995	Monodelphis_domestica
ENSMAMG00000017918	tsr1	99	90.119	ENSMALG00000011681	tsr1	100	89.762	Monopterus_albus
ENSMAMG00000017918	tsr1	99	54.296	MGP_CAROLIEiJ_G0016727	Tsr1	99	53.864	Mus_caroli
ENSMAMG00000017918	tsr1	99	54.970	ENSMUSG00000038335	Tsr1	99	54.535	Mus_musculus
ENSMAMG00000017918	tsr1	99	55.210	MGP_PahariEiJ_G0017864	Tsr1	99	54.773	Mus_pahari
ENSMAMG00000017918	tsr1	99	54.970	MGP_SPRETEiJ_G0017570	Tsr1	99	54.535	Mus_spretus
ENSMAMG00000017918	tsr1	81	57.289	ENSMPUG00000013000	TSR1	100	57.434	Mustela_putorius_furo
ENSMAMG00000017918	tsr1	99	55.449	ENSMLUG00000003505	TSR1	99	55.251	Myotis_lucifugus
ENSMAMG00000017918	tsr1	100	85.986	ENSNBRG00000020728	tsr1	100	85.392	Neolamprologus_brichardi
ENSMAMG00000017918	tsr1	97	48.485	ENSNLEG00000017184	TSR1	94	67.160	Nomascus_leucogenys
ENSMAMG00000017918	tsr1	99	84.816	ENSONIG00000013131	tsr1	100	84.104	Oreochromis_niloticus
ENSMAMG00000017918	tsr1	95	50.123	ENSOANG00000008637	TSR1	97	65.847	Ornithorhynchus_anatinus
ENSMAMG00000017918	tsr1	99	55.210	ENSOCUG00000014256	TSR1	99	54.654	Oryctolagus_cuniculus
ENSMAMG00000017918	tsr1	100	83.610	ENSORLG00000004926	tsr1	100	83.610	Oryzias_latipes
ENSMAMG00000017918	tsr1	100	83.610	ENSORLG00020008792	tsr1	100	83.254	Oryzias_latipes_hni
ENSMAMG00000017918	tsr1	100	83.729	ENSORLG00015013838	tsr1	100	83.729	Oryzias_latipes_hsok
ENSMAMG00000017918	tsr1	100	84.798	ENSOMEG00000004830	tsr1	100	84.323	Oryzias_melastigma
ENSMAMG00000017918	tsr1	99	54.245	ENSOGAG00000004492	TSR1	99	54.009	Otolemur_garnettii
ENSMAMG00000017918	tsr1	99	55.928	ENSOARG00000015437	TSR1	97	55.847	Ovis_aries
ENSMAMG00000017918	tsr1	97	54.655	ENSPPAG00000036355	TSR1	98	55.260	Pan_paniscus
ENSMAMG00000017918	tsr1	99	53.237	ENSPPRG00000015519	-	99	53.524	Panthera_pardus
ENSMAMG00000017918	tsr1	99	53.237	ENSPTIG00000010608	TSR1	99	53.524	Panthera_tigris_altaica
ENSMAMG00000017918	tsr1	97	54.655	ENSPTRG00000008547	TSR1	98	55.260	Pan_troglodytes
ENSMAMG00000017918	tsr1	98	52.111	ENSPANG00000024463	TSR1	99	52.778	Papio_anubis
ENSMAMG00000017918	tsr1	99	71.734	ENSPKIG00000013972	tsr1	100	71.564	Paramormyrops_kingsleyae
ENSMAMG00000017918	tsr1	87	55.707	ENSPSIG00000018258	TSR1	99	54.839	Pelodiscus_sinensis
ENSMAMG00000017918	tsr1	99	82.198	ENSPMGG00000011577	tsr1	99	80.526	Periophthalmus_magnuspinnatus
ENSMAMG00000017918	tsr1	99	53.533	ENSPEMG00000018033	Tsr1	99	53.461	Peromyscus_maniculatus_bairdii
ENSMAMG00000017918	tsr1	98	54.953	ENSPCIG00000009357	TSR1	97	55.817	Phascolarctos_cinereus
ENSMAMG00000017918	tsr1	91	82.115	ENSPFOG00000004483	TSR1	100	81.094	Poecilia_formosa
ENSMAMG00000017918	tsr1	100	82.346	ENSPLAG00000022320	tsr1	100	82.485	Poecilia_latipinna
ENSMAMG00000017918	tsr1	100	82.464	ENSPMEG00000004577	tsr1	100	82.604	Poecilia_mexicana
ENSMAMG00000017918	tsr1	97	84.005	ENSPREG00000010354	tsr1	96	82.530	Poecilia_reticulata
ENSMAMG00000017918	tsr1	97	49.639	ENSPPYG00000007792	TSR1	98	50.240	Pongo_abelii
ENSMAMG00000017918	tsr1	51	67.442	ENSPCAG00000012973	-	69	67.500	Procavia_capensis
ENSMAMG00000017918	tsr1	99	54.262	ENSPCOG00000017928	TSR1	99	54.862	Propithecus_coquereli
ENSMAMG00000017918	tsr1	99	54.611	ENSPVAG00000002162	TSR1	99	54.296	Pteropus_vampyrus
ENSMAMG00000017918	tsr1	100	85.392	ENSPNYG00000016163	tsr1	100	84.798	Pundamilia_nyererei
ENSMAMG00000017918	tsr1	99	74.823	ENSPNAG00000008659	tsr1	100	75.059	Pygocentrus_nattereri
ENSMAMG00000017918	tsr1	99	54.251	ENSRNOG00000002980	Tsr1	99	53.699	Rattus_norvegicus
ENSMAMG00000017918	tsr1	99	54.654	ENSRBIG00000040016	TSR1	99	54.935	Rhinopithecus_bieti
ENSMAMG00000017918	tsr1	99	54.535	ENSRROG00000030361	TSR1	99	54.816	Rhinopithecus_roxellana
ENSMAMG00000017918	tsr1	97	54.897	ENSSBOG00000020785	TSR1	98	55.623	Saimiri_boliviensis_boliviensis
ENSMAMG00000017918	tsr1	98	56.615	ENSSHAG00000011394	TSR1	99	55.991	Sarcophilus_harrisii
ENSMAMG00000017918	tsr1	99	74.970	ENSSFOG00015005455	tsr1	100	73.872	Scleropages_formosus
ENSMAMG00000017918	tsr1	99	85.238	ENSSMAG00000009504	tsr1	100	85.357	Scophthalmus_maximus
ENSMAMG00000017918	tsr1	100	88.994	ENSSDUG00000012074	tsr1	100	89.349	Seriola_dumerili
ENSMAMG00000017918	tsr1	100	88.968	ENSSLDG00000002031	tsr1	100	88.612	Seriola_lalandi_dorsalis
ENSMAMG00000017918	tsr1	92	56.574	ENSSARG00000000759	TSR1	93	56.574	Sorex_araneus
ENSMAMG00000017918	tsr1	99	57.945	ENSSPUG00000007042	TSR1	99	57.587	Sphenodon_punctatus
ENSMAMG00000017918	tsr1	99	88.138	ENSSPAG00000021951	tsr1	100	88.639	Stegastes_partitus
ENSMAMG00000017918	tsr1	99	56.287	ENSSSCG00000038534	TSR1	99	55.131	Sus_scrofa
ENSMAMG00000017918	tsr1	90	59.894	ENSTGUG00000005883	TSR1	100	57.366	Taeniopygia_guttata
ENSMAMG00000017918	tsr1	99	82.718	ENSTRUG00000004665	tsr1	100	82.718	Takifugu_rubripes
ENSMAMG00000017918	tsr1	99	82.692	ENSTNIG00000016196	tsr1	100	83.154	Tetraodon_nigroviridis
ENSMAMG00000017918	tsr1	67	71.538	ENSTBEG00000015275	-	66	71.538	Tupaia_belangeri
ENSMAMG00000017918	tsr1	99	55.210	ENSTTRG00000001177	TSR1	99	55.370	Tursiops_truncatus
ENSMAMG00000017918	tsr1	99	54.436	ENSUAMG00000025160	TSR1	99	54.415	Ursus_americanus
ENSMAMG00000017918	tsr1	95	53.903	ENSUMAG00000009294	TSR1	98	54.523	Ursus_maritimus
ENSMAMG00000017918	tsr1	99	54.306	ENSVVUG00000021767	TSR1	99	54.306	Vulpes_vulpes
ENSMAMG00000017918	tsr1	99	52.471	ENSXETG00000023797	tsr1	100	52.308	Xenopus_tropicalis
ENSMAMG00000017918	tsr1	99	81.287	ENSXCOG00000009635	tsr1	100	81.213	Xiphophorus_couchianus
ENSMAMG00000017918	tsr1	100	82.562	ENSXMAG00000001397	tsr1	97	82.423	Xiphophorus_maculatus