EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000017975 (Gene tree)
Gene ID: 113140150
Gene Symbol: polr3f
Alias: zgc:56299|zgc:76983
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 4508 bases
Position: chrOOHQ01000027.1:331626-336133
Accession: 113140150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000026762	RNA_pol_Rpc34	PF05158.12	4e-99	1	1
ENSMAMP00000026753	RNA_pol_Rpc34	PF05158.12	9.3e-98	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000027451	-	1866	-	ENSMAMP00000026762	316 (aa)	XP_026179680	UPI000E462122
ENSMAMT00000027442	-	2508	-	ENSMAMP00000026753	316 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000017975's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000017975's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000017975	polr3f	100	86.392	ENSG00000132664	POLR3F	100	86.392	Homo_sapiens
ENSMAMG00000017975	polr3f	100	94.937	ENSAPOG00000008271	polr3f	100	94.937	Acanthochromis_polyacanthus
ENSMAMG00000017975	polr3f	100	86.076	ENSAMEG00000005222	POLR3F	100	86.076	Ailuropoda_melanoleuca
ENSMAMG00000017975	polr3f	100	87.658	ENSACIG00000006705	polr3f	100	87.658	Amphilophus_citrinellus
ENSMAMG00000017975	polr3f	100	95.253	ENSAOCG00000000687	polr3f	100	95.253	Amphiprion_ocellaris
ENSMAMG00000017975	polr3f	100	94.937	ENSAPEG00000015263	polr3f	100	94.937	Amphiprion_percula
ENSMAMG00000017975	polr3f	87	95.636	ENSATEG00000015539	polr3f	100	95.636	Anabas_testudineus
ENSMAMG00000017975	polr3f	87	88.727	ENSAPLG00000005533	POLR3F	100	88.727	Anas_platyrhynchos
ENSMAMG00000017975	polr3f	97	86.039	ENSACAG00000014293	POLR3F	99	86.039	Anolis_carolinensis
ENSMAMG00000017975	polr3f	100	86.392	ENSANAG00000026726	POLR3F	100	86.392	Aotus_nancymaae
ENSMAMG00000017975	polr3f	100	94.937	ENSACLG00000003615	polr3f	100	94.937	Astatotilapia_calliptera
ENSMAMG00000017975	polr3f	100	92.089	ENSAMXG00000036020	polr3f	100	92.089	Astyanax_mexicanus
ENSMAMG00000017975	polr3f	100	85.759	ENSBTAG00000008825	POLR3F	100	85.759	Bos_taurus
ENSMAMG00000017975	polr3f	96	33.882	WBGene00021112	W09C3.4	97	33.882	Caenorhabditis_elegans
ENSMAMG00000017975	polr3f	100	86.392	ENSCJAG00000005159	POLR3F	100	86.392	Callithrix_jacchus
ENSMAMG00000017975	polr3f	100	85.759	ENSCAFG00000005420	POLR3F	100	85.759	Canis_familiaris
ENSMAMG00000017975	polr3f	100	85.759	ENSCAFG00020027500	POLR3F	100	85.759	Canis_lupus_dingo
ENSMAMG00000017975	polr3f	100	85.759	ENSCHIG00000014743	POLR3F	100	85.759	Capra_hircus
ENSMAMG00000017975	polr3f	100	85.759	ENSTSYG00000004207	POLR3F	100	85.759	Carlito_syrichta
ENSMAMG00000017975	polr3f	93	48.649	ENSCAPG00000008423	POLR3F	100	71.429	Cavia_aperea
ENSMAMG00000017975	polr3f	100	85.443	ENSCPOG00000002400	POLR3F	100	85.443	Cavia_porcellus
ENSMAMG00000017975	polr3f	100	76.582	ENSCCAG00000021800	POLR3F	100	76.582	Cebus_capucinus
ENSMAMG00000017975	polr3f	100	86.076	ENSCATG00000019507	POLR3F	100	86.076	Cercocebus_atys
ENSMAMG00000017975	polr3f	100	86.076	ENSCLAG00000016296	POLR3F	100	86.076	Chinchilla_lanigera
ENSMAMG00000017975	polr3f	100	86.076	ENSCSAG00000011513	POLR3F	100	86.076	Chlorocebus_sabaeus
ENSMAMG00000017975	polr3f	73	85.393	ENSCHOG00000013268	POLR3F	73	85.393	Choloepus_hoffmanni
ENSMAMG00000017975	polr3f	87	88.000	ENSCPBG00000023473	POLR3F	100	88.000	Chrysemys_picta_bellii
ENSMAMG00000017975	polr3f	99	59.365	ENSCING00000001212	-	99	59.683	Ciona_intestinalis
ENSMAMG00000017975	polr3f	71	60.000	ENSCSAVG00000003340	-	96	63.905	Ciona_savignyi
ENSMAMG00000017975	polr3f	92	86.598	ENSCANG00000037390	POLR3F	100	86.598	Colobus_angolensis_palliatus
ENSMAMG00000017975	polr3f	100	85.127	ENSCGRG00001002032	Polr3f	100	85.127	Cricetulus_griseus_chok1gshd
ENSMAMG00000017975	polr3f	100	85.127	ENSCGRG00000010852	Polr3f	100	85.127	Cricetulus_griseus_crigri
ENSMAMG00000017975	polr3f	100	91.772	ENSCSEG00000001247	polr3f	100	91.772	Cynoglossus_semilaevis
ENSMAMG00000017975	polr3f	100	92.722	ENSCVAG00000007611	polr3f	100	92.722	Cyprinodon_variegatus
ENSMAMG00000017975	polr3f	100	91.772	ENSDARG00000012572	polr3f	100	91.772	Danio_rerio
ENSMAMG00000017975	polr3f	100	83.228	ENSDNOG00000010719	POLR3F	100	83.228	Dasypus_novemcinctus
ENSMAMG00000017975	polr3f	100	86.076	ENSDORG00000016352	Polr3f	100	86.076	Dipodomys_ordii
ENSMAMG00000017975	polr3f	95	50.667	FBgn0038951	CG5380	99	50.667	Drosophila_melanogaster
ENSMAMG00000017975	polr3f	88	51.971	ENSETEG00000015485	-	99	51.971	Echinops_telfairi
ENSMAMG00000017975	polr3f	100	77.215	ENSEBUG00000006783	polr3f	100	77.215	Eptatretus_burgeri
ENSMAMG00000017975	polr3f	100	86.392	ENSEASG00005002022	POLR3F	100	86.392	Equus_asinus_asinus
ENSMAMG00000017975	polr3f	100	86.392	ENSECAG00000009920	POLR3F	100	86.392	Equus_caballus
ENSMAMG00000017975	polr3f	80	76.000	ENSEEUG00000000184	POLR3F	80	76.000	Erinaceus_europaeus
ENSMAMG00000017975	polr3f	100	92.089	ENSELUG00000001558	polr3f	100	92.089	Esox_lucius
ENSMAMG00000017975	polr3f	100	86.076	ENSFCAG00000013828	POLR3F	100	86.076	Felis_catus
ENSMAMG00000017975	polr3f	87	89.818	ENSFALG00000007623	POLR3F	100	89.818	Ficedula_albicollis
ENSMAMG00000017975	polr3f	100	85.443	ENSFDAG00000002528	POLR3F	100	85.443	Fukomys_damarensis
ENSMAMG00000017975	polr3f	100	91.456	ENSFHEG00000006450	polr3f	100	91.456	Fundulus_heteroclitus
ENSMAMG00000017975	polr3f	100	87.342	ENSGALG00000008749	POLR3F	100	87.342	Gallus_gallus
ENSMAMG00000017975	polr3f	100	93.987	ENSGAFG00000003698	polr3f	100	93.987	Gambusia_affinis
ENSMAMG00000017975	polr3f	100	86.709	ENSGAGG00000006151	POLR3F	100	86.709	Gopherus_agassizii
ENSMAMG00000017975	polr3f	100	86.392	ENSGGOG00000011543	POLR3F	100	86.392	Gorilla_gorilla
ENSMAMG00000017975	polr3f	100	95.253	ENSHBUG00000013806	polr3f	100	95.253	Haplochromis_burtoni
ENSMAMG00000017975	polr3f	100	85.443	ENSHGLG00000011867	POLR3F	100	85.443	Heterocephalus_glaber_female
ENSMAMG00000017975	polr3f	100	85.443	ENSHGLG00100012577	POLR3F	100	85.443	Heterocephalus_glaber_male
ENSMAMG00000017975	polr3f	100	82.595	ENSHCOG00000011751	polr3f	100	82.595	Hippocampus_comes
ENSMAMG00000017975	polr3f	100	91.139	ENSIPUG00000013347	polr3f	100	91.139	Ictalurus_punctatus
ENSMAMG00000017975	polr3f	100	86.076	ENSSTOG00000013588	POLR3F	100	86.076	Ictidomys_tridecemlineatus
ENSMAMG00000017975	polr3f	100	85.443	ENSJJAG00000017513	Polr3f	100	85.443	Jaculus_jaculus
ENSMAMG00000017975	polr3f	87	88.000	ENSKMAG00000016495	polr3f	100	88.000	Kryptolebias_marmoratus
ENSMAMG00000017975	polr3f	73	95.690	ENSLBEG00000011998	polr3f	100	95.690	Labrus_bergylta
ENSMAMG00000017975	polr3f	100	85.759	ENSLACG00000009371	POLR3F	100	85.759	Latimeria_chalumnae
ENSMAMG00000017975	polr3f	100	90.506	ENSLOCG00000015701	polr3f	100	90.506	Lepisosteus_oculatus
ENSMAMG00000017975	polr3f	100	85.759	ENSLAFG00000004929	POLR3F	100	85.759	Loxodonta_africana
ENSMAMG00000017975	polr3f	100	86.076	ENSMFAG00000002227	POLR3F	100	86.076	Macaca_fascicularis
ENSMAMG00000017975	polr3f	87	88.000	ENSMMUG00000004143	POLR3F	100	88.000	Macaca_mulatta
ENSMAMG00000017975	polr3f	100	86.076	ENSMNEG00000033404	POLR3F	100	86.076	Macaca_nemestrina
ENSMAMG00000017975	polr3f	100	86.076	ENSMLEG00000021905	POLR3F	100	86.076	Mandrillus_leucophaeus
ENSMAMG00000017975	polr3f	100	94.620	ENSMZEG00005015134	polr3f	100	94.620	Maylandia_zebra
ENSMAMG00000017975	polr3f	100	87.975	ENSMGAG00000006691	POLR3F	100	87.975	Meleagris_gallopavo
ENSMAMG00000017975	polr3f	100	85.443	ENSMAUG00000020176	Polr3f	100	85.443	Mesocricetus_auratus
ENSMAMG00000017975	polr3f	100	86.076	ENSMICG00000044519	POLR3F	100	86.076	Microcebus_murinus
ENSMAMG00000017975	polr3f	100	85.759	ENSMOCG00000018352	Polr3f	100	85.759	Microtus_ochrogaster
ENSMAMG00000017975	polr3f	93	95.286	ENSMMOG00000018477	polr3f	100	95.286	Mola_mola
ENSMAMG00000017975	polr3f	100	86.709	ENSMODG00000005624	POLR3F	100	86.709	Monodelphis_domestica
ENSMAMG00000017975	polr3f	100	96.203	ENSMALG00000006685	polr3f	100	96.203	Monopterus_albus
ENSMAMG00000017975	polr3f	100	85.127	MGP_CAROLIEiJ_G0024385	Polr3f	100	85.127	Mus_caroli
ENSMAMG00000017975	polr3f	100	85.127	ENSMUSG00000027427	Polr3f	100	85.127	Mus_musculus
ENSMAMG00000017975	polr3f	100	85.127	MGP_PahariEiJ_G0025829	Polr3f	100	85.127	Mus_pahari
ENSMAMG00000017975	polr3f	100	85.127	MGP_SPRETEiJ_G0025304	Polr3f	100	85.127	Mus_spretus
ENSMAMG00000017975	polr3f	100	65.231	ENSMPUG00000001252	-	100	65.231	Mustela_putorius_furo
ENSMAMG00000017975	polr3f	100	86.076	ENSMLUG00000014844	POLR3F	100	86.076	Myotis_lucifugus
ENSMAMG00000017975	polr3f	100	85.127	ENSNGAG00000010898	Polr3f	100	85.127	Nannospalax_galili
ENSMAMG00000017975	polr3f	100	95.570	ENSNBRG00000020796	polr3f	100	95.570	Neolamprologus_brichardi
ENSMAMG00000017975	polr3f	100	86.392	ENSNLEG00000009778	POLR3F	100	86.392	Nomascus_leucogenys
ENSMAMG00000017975	polr3f	93	82.034	ENSMEUG00000010320	POLR3F	100	82.034	Notamacropus_eugenii
ENSMAMG00000017975	polr3f	100	85.759	ENSOPRG00000003385	POLR3F	100	85.759	Ochotona_princeps
ENSMAMG00000017975	polr3f	100	86.392	ENSODEG00000011521	POLR3F	100	86.392	Octodon_degus
ENSMAMG00000017975	polr3f	100	94.937	ENSONIG00000006858	polr3f	100	94.937	Oreochromis_niloticus
ENSMAMG00000017975	polr3f	100	86.392	ENSOANG00000001253	POLR3F	100	86.392	Ornithorhynchus_anatinus
ENSMAMG00000017975	polr3f	100	86.392	ENSOCUG00000015067	POLR3F	100	86.392	Oryctolagus_cuniculus
ENSMAMG00000017975	polr3f	100	91.139	ENSORLG00000022412	polr3f	100	91.139	Oryzias_latipes
ENSMAMG00000017975	polr3f	100	91.139	ENSORLG00020021944	polr3f	100	91.139	Oryzias_latipes_hni
ENSMAMG00000017975	polr3f	100	85.127	ENSOGAG00000002916	POLR3F	100	85.127	Otolemur_garnettii
ENSMAMG00000017975	polr3f	100	85.759	ENSOARG00000000315	-	100	85.759	Ovis_aries
ENSMAMG00000017975	polr3f	100	52.215	ENSOARG00000008647	-	100	52.215	Ovis_aries
ENSMAMG00000017975	polr3f	100	86.392	ENSPPAG00000036681	POLR3F	100	86.392	Pan_paniscus
ENSMAMG00000017975	polr3f	100	86.076	ENSPPRG00000024604	POLR3F	100	86.076	Panthera_pardus
ENSMAMG00000017975	polr3f	100	86.076	ENSPTIG00000020292	POLR3F	100	86.076	Panthera_tigris_altaica
ENSMAMG00000017975	polr3f	100	86.392	ENSPTRG00000013287	POLR3F	100	86.392	Pan_troglodytes
ENSMAMG00000017975	polr3f	100	86.076	ENSPANG00000025015	POLR3F	100	86.076	Papio_anubis
ENSMAMG00000017975	polr3f	100	89.557	ENSPKIG00000004427	polr3f	100	89.557	Paramormyrops_kingsleyae
ENSMAMG00000017975	polr3f	87	89.455	ENSPSIG00000016613	POLR3F	100	89.455	Pelodiscus_sinensis
ENSMAMG00000017975	polr3f	100	57.367	ENSPMGG00000018350	polr3f	100	61.076	Periophthalmus_magnuspinnatus
ENSMAMG00000017975	polr3f	100	86.076	ENSPEMG00000006966	Polr3f	100	86.076	Peromyscus_maniculatus_bairdii
ENSMAMG00000017975	polr3f	100	77.215	ENSPMAG00000005530	polr3f	100	77.215	Petromyzon_marinus
ENSMAMG00000017975	polr3f	100	86.392	ENSPCIG00000000908	POLR3F	85	86.392	Phascolarctos_cinereus
ENSMAMG00000017975	polr3f	100	93.987	ENSPFOG00000018334	polr3f	100	93.987	Poecilia_formosa
ENSMAMG00000017975	polr3f	100	93.987	ENSPLAG00000021803	polr3f	100	93.987	Poecilia_latipinna
ENSMAMG00000017975	polr3f	100	93.987	ENSPMEG00000013150	polr3f	100	93.987	Poecilia_mexicana
ENSMAMG00000017975	polr3f	100	93.987	ENSPREG00000005278	polr3f	100	93.987	Poecilia_reticulata
ENSMAMG00000017975	polr3f	100	86.392	ENSPPYG00000010737	POLR3F	100	86.392	Pongo_abelii
ENSMAMG00000017975	polr3f	66	89.865	ENSPCAG00000004893	POLR3F	70	89.865	Procavia_capensis
ENSMAMG00000017975	polr3f	100	86.076	ENSPCOG00000004543	POLR3F	100	86.076	Propithecus_coquereli
ENSMAMG00000017975	polr3f	100	85.759	ENSPVAG00000000403	POLR3F	100	85.759	Pteropus_vampyrus
ENSMAMG00000017975	polr3f	100	95.253	ENSPNYG00000016276	polr3f	100	95.253	Pundamilia_nyererei
ENSMAMG00000017975	polr3f	100	92.405	ENSPNAG00000005164	polr3f	100	92.405	Pygocentrus_nattereri
ENSMAMG00000017975	polr3f	100	85.443	ENSRNOG00000007548	Polr3f	85	85.443	Rattus_norvegicus
ENSMAMG00000017975	polr3f	100	86.076	ENSRBIG00000021268	POLR3F	100	86.076	Rhinopithecus_bieti
ENSMAMG00000017975	polr3f	100	86.076	ENSRROG00000039911	POLR3F	100	86.076	Rhinopithecus_roxellana
ENSMAMG00000017975	polr3f	100	86.392	ENSSBOG00000018207	POLR3F	100	86.392	Saimiri_boliviensis_boliviensis
ENSMAMG00000017975	polr3f	100	68.770	ENSSHAG00000018160	POLR3F	100	68.536	Sarcophilus_harrisii
ENSMAMG00000017975	polr3f	100	89.557	ENSSFOG00015022433	polr3f	100	89.557	Scleropages_formosus
ENSMAMG00000017975	polr3f	100	94.620	ENSSMAG00000021029	polr3f	100	94.620	Scophthalmus_maximus
ENSMAMG00000017975	polr3f	100	84.494	ENSSDUG00000022435	polr3f	100	84.494	Seriola_dumerili
ENSMAMG00000017975	polr3f	100	95.570	ENSSLDG00000012761	polr3f	100	95.570	Seriola_lalandi_dorsalis
ENSMAMG00000017975	polr3f	100	77.532	ENSSARG00000006039	POLR3F	100	77.532	Sorex_araneus
ENSMAMG00000017975	polr3f	100	86.392	ENSSPUG00000001873	POLR3F	100	86.392	Sphenodon_punctatus
ENSMAMG00000017975	polr3f	100	87.342	ENSSPAG00000002092	polr3f	100	87.342	Stegastes_partitus
ENSMAMG00000017975	polr3f	100	85.759	ENSSSCG00000007095	POLR3F	100	90.948	Sus_scrofa
ENSMAMG00000017975	polr3f	100	87.658	ENSTGUG00000005839	POLR3F	100	87.658	Taeniopygia_guttata
ENSMAMG00000017975	polr3f	100	93.038	ENSTRUG00000012101	polr3f	100	93.038	Takifugu_rubripes
ENSMAMG00000017975	polr3f	100	92.089	ENSTNIG00000006456	polr3f	100	92.089	Tetraodon_nigroviridis
ENSMAMG00000017975	polr3f	100	69.620	ENSTBEG00000007921	POLR3F	100	69.620	Tupaia_belangeri
ENSMAMG00000017975	polr3f	100	85.759	ENSTTRG00000002580	POLR3F	100	85.759	Tursiops_truncatus
ENSMAMG00000017975	polr3f	53	87.952	ENSUAMG00000024166	POLR3F	100	87.952	Ursus_americanus
ENSMAMG00000017975	polr3f	100	85.759	ENSUMAG00000024944	POLR3F	100	85.759	Ursus_maritimus
ENSMAMG00000017975	polr3f	100	85.759	ENSVPAG00000009063	POLR3F	100	85.759	Vicugna_pacos
ENSMAMG00000017975	polr3f	100	85.759	ENSVVUG00000012925	POLR3F	100	85.759	Vulpes_vulpes
ENSMAMG00000017975	polr3f	100	85.443	ENSXETG00000024898	polr3f	100	85.443	Xenopus_tropicalis
ENSMAMG00000017975	polr3f	87	94.182	ENSXCOG00000010301	polr3f	100	94.182	Xiphophorus_couchianus
ENSMAMG00000017975	polr3f	100	93.671	ENSXMAG00000004604	polr3f	100	93.671	Xiphophorus_maculatus