EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAMG00000017993 (Gene tree)
Gene ID
113125489
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Minus strand
Length
23957 bases
Position
chrOOHQ01000107.1:33484559-33508515
Accession
113125489
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000026814tRNA_anti-codonPF01336.259.2e-1211
ENSMAMP00000026798tRNA_anti-codonPF01336.251.3e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000027503-1632-ENSMAMP00000026814543 (aa)--
ENSMAMT00000027487-3035-ENSMAMP00000026798600 (aa)XP_026154762UPI000E45C118
Gene Model
Click here to download ENSMAMG00000017993's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000017993's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAMG00000017993rpa19970.000ENSMAMG00000020097RPA18869.108
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000017993rpa110087.500ENSAPOG00000011658rpa110087.500Acanthochromis_polyacanthus
ENSMAMG00000017993rpa19668.326ENSAPOG00000019409RPA19068.326Acanthochromis_polyacanthus
ENSMAMG00000017993rpa19962.931ENSAMEG00000007706RPA19663.912Ailuropoda_melanoleuca
ENSMAMG00000017993rpa19678.609ENSACIG00000007277rpa19978.609Amphilophus_citrinellus
ENSMAMG00000017993rpa19961.034ENSACIG00000012881RPA19961.840Amphilophus_citrinellus
ENSMAMG00000017993rpa110088.500ENSAOCG00000023376rpa110088.500Amphiprion_ocellaris
ENSMAMG00000017993rpa19958.469ENSAOCG00000009003RPA19958.760Amphiprion_ocellaris
ENSMAMG00000017993rpa110088.333ENSAPEG00000008634rpa110088.333Amphiprion_percula
ENSMAMG00000017993rpa19769.128ENSAPEG00000019132RPA19957.727Amphiprion_percula
ENSMAMG00000017993rpa19970.833ENSATEG00000006443RPA19959.505Anabas_testudineus
ENSMAMG00000017993rpa110087.034ENSATEG00000022024rpa110086.087Anabas_testudineus
ENSMAMG00000017993rpa19952.761ENSAPLG00000012442RPA19953.916Anas_platyrhynchos
ENSMAMG00000017993rpa19957.932ENSACAG00000014490RPA19857.781Anolis_carolinensis
ENSMAMG00000017993rpa19965.938ENSANAG00000023456RPA19864.081Aotus_nancymaae
ENSMAMG00000017993rpa19988.288ENSACLG00000006640rpa19988.288Astatotilapia_calliptera
ENSMAMG00000017993rpa19961.260ENSACLG00000005223RPA19961.260Astatotilapia_calliptera
ENSMAMG00000017993rpa110080.367ENSAMXG00000008418rpa19880.367Astyanax_mexicanus
ENSMAMG00000017993rpa19962.684ENSBTAG00000009711RPA19962.684Bos_taurus
ENSMAMG00000017993rpa18931.102WBGene00017546rpa-17631.102Caenorhabditis_elegans
ENSMAMG00000017993rpa19961.897ENSCJAG00000001848RPA19962.316Callithrix_jacchus
ENSMAMG00000017993rpa19962.951ENSCAFG00000019249RPA19963.607Canis_familiaris
ENSMAMG00000017993rpa19962.951ENSCAFG00020009847RPA19963.607Canis_lupus_dingo
ENSMAMG00000017993rpa19962.848ENSCHIG00000026308RPA19963.011Capra_hircus
ENSMAMG00000017993rpa19962.092ENSTSYG00000003482-9962.092Carlito_syrichta
ENSMAMG00000017993rpa19962.806ENSCPOG00000000035RPA19962.806Cavia_porcellus
ENSMAMG00000017993rpa19952.512ENSCCAG00000010981RPA19953.247Cebus_capucinus
ENSMAMG00000017993rpa19958.824ENSCLAG00000015045-9958.824Chinchilla_lanigera
ENSMAMG00000017993rpa19962.643ENSCLAG00000005185-9962.643Chinchilla_lanigera
ENSMAMG00000017993rpa19953.333ENSCSAG00000013833RPA19953.571Chlorocebus_sabaeus
ENSMAMG00000017993rpa19960.862ENSCHOG00000013540-9962.075Choloepus_hoffmanni
ENSMAMG00000017993rpa18069.794ENSCHOG00000009454-9969.794Choloepus_hoffmanni
ENSMAMG00000017993rpa19962.193ENSCPBG00000020377RPA19963.158Chrysemys_picta_bellii
ENSMAMG00000017993rpa19942.810ENSCING00000023482-9942.810Ciona_intestinalis
ENSMAMG00000017993rpa19967.031ENSCANG00000030911RPA19667.031Colobus_angolensis_palliatus
ENSMAMG00000017993rpa19962.480ENSCGRG00001008197Rpa19962.643Cricetulus_griseus_chok1gshd
ENSMAMG00000017993rpa18368.736ENSCGRG00000000582Rpa19964.229Cricetulus_griseus_crigri
ENSMAMG00000017993rpa110080.066ENSCSEG00000013066rpa110080.066Cynoglossus_semilaevis
ENSMAMG00000017993rpa19954.992ENSCSEG00000012726RPA19956.014Cynoglossus_semilaevis
ENSMAMG00000017993rpa19169.807ENSCVAG00000013446-9657.232Cyprinodon_variegatus
ENSMAMG00000017993rpa110084.653ENSCVAG00000019431rpa110084.818Cyprinodon_variegatus
ENSMAMG00000017993rpa19975.167ENSDARG00000003938rpa19975.167Danio_rerio
ENSMAMG00000017993rpa19963.167ENSDNOG00000017218RPA19664.250Dasypus_novemcinctus
ENSMAMG00000017993rpa19962.586ENSDORG00000006199Rpa19962.418Dipodomys_ordii
ENSMAMG00000017993rpa19843.494FBgn0010173RpA-709942.553Drosophila_melanogaster
ENSMAMG00000017993rpa18273.196ENSETEG00000017608RPA18273.196Echinops_telfairi
ENSMAMG00000017993rpa19966.241ENSEASG00005009372RPA19965.642Equus_asinus_asinus
ENSMAMG00000017993rpa19963.175ENSECAG00000023886RPA19963.339Equus_caballus
ENSMAMG00000017993rpa17770.406ENSEEUG00000002186-6870.406Erinaceus_europaeus
ENSMAMG00000017993rpa19980.693ENSELUG00000021071rpa19980.693Esox_lucius
ENSMAMG00000017993rpa19364.522ENSELUG00000006136RPA19964.522Esox_lucius
ENSMAMG00000017993rpa19962.215ENSFCAG00000006306RPA19962.215Felis_catus
ENSMAMG00000017993rpa19961.311ENSFALG00000006575RPA19961.311Ficedula_albicollis
ENSMAMG00000017993rpa19964.216ENSFDAG00000007720RPA19964.216Fukomys_damarensis
ENSMAMG00000017993rpa110083.636ENSFHEG00000003580rpa110083.636Fundulus_heteroclitus
ENSMAMG00000017993rpa19981.516ENSGMOG00000010382rpa19977.013Gadus_morhua
ENSMAMG00000017993rpa19961.184ENSGALG00000003072RPA19961.184Gallus_gallus
ENSMAMG00000017993rpa110084.027ENSGAFG00000012916rpa110084.027Gambusia_affinis
ENSMAMG00000017993rpa19958.168ENSGAFG00000020953RPA19958.168Gambusia_affinis
ENSMAMG00000017993rpa110085.075ENSGACG00000010856rpa110085.075Gasterosteus_aculeatus
ENSMAMG00000017993rpa19962.029ENSGAGG00000013611RPA19962.029Gopherus_agassizii
ENSMAMG00000017993rpa19967.153ENSGGOG00000014186RPA19963.667Gorilla_gorilla
ENSMAMG00000017993rpa19990.333ENSHBUG00000017773rpa19990.333Haplochromis_burtoni
ENSMAMG00000017993rpa19957.961ENSHBUG00000009348RPA19757.961Haplochromis_burtoni
ENSMAMG00000017993rpa19963.889ENSHGLG00000008846RPA19964.052Heterocephalus_glaber_female
ENSMAMG00000017993rpa19963.889ENSHGLG00100017755-9964.052Heterocephalus_glaber_male
ENSMAMG00000017993rpa19959.477ENSHGLG00100000799-9959.477Heterocephalus_glaber_male
ENSMAMG00000017993rpa19954.235ENSHGLG00100002005-9954.323Heterocephalus_glaber_male
ENSMAMG00000017993rpa19947.339ENSHCOG00000000351RPA19743.688Hippocampus_comes
ENSMAMG00000017993rpa110075.204ENSHCOG00000001401rpa110075.204Hippocampus_comes
ENSMAMG00000017993rpa19977.152ENSIPUG00000004400rpa19977.152Ictalurus_punctatus
ENSMAMG00000017993rpa19662.124ENSSTOG00000022475RPA19463.781Ictidomys_tridecemlineatus
ENSMAMG00000017993rpa19963.276ENSJJAG00000000876Rpa19864.527Jaculus_jaculus
ENSMAMG00000017993rpa110081.669ENSKMAG00000005605rpa110081.863Kryptolebias_marmoratus
ENSMAMG00000017993rpa19960.315ENSKMAG00000000234RPA19959.768Kryptolebias_marmoratus
ENSMAMG00000017993rpa19986.837ENSLBEG00000021604rpa19985.762Labrus_bergylta
ENSMAMG00000017993rpa19668.650ENSLBEG00000002281RPA18368.650Labrus_bergylta
ENSMAMG00000017993rpa18662.208ENSLACG00000007210RPA19861.317Latimeria_chalumnae
ENSMAMG00000017993rpa19971.947ENSLOCG00000006397rpa19972.112Lepisosteus_oculatus
ENSMAMG00000017993rpa19961.735ENSLAFG00000015354RPA19961.452Loxodonta_africana
ENSMAMG00000017993rpa18260.996ENSMFAG00000036138-9862.020Macaca_fascicularis
ENSMAMG00000017993rpa19963.276ENSMMUG00000011604-9864.081Macaca_mulatta
ENSMAMG00000017993rpa19958.609ENSMMUG00000002442-9958.320Macaca_mulatta
ENSMAMG00000017993rpa19962.586ENSMNEG00000031632-9962.092Macaca_nemestrina
ENSMAMG00000017993rpa19958.759ENSMNEG00000029837-9665.570Macaca_nemestrina
ENSMAMG00000017993rpa19960.034ENSMLEG00000038768-9860.840Mandrillus_leucophaeus
ENSMAMG00000017993rpa19961.260ENSMZEG00005024731RPA19961.260Maylandia_zebra
ENSMAMG00000017993rpa19990.000ENSMZEG00005007551rpa19990.000Maylandia_zebra
ENSMAMG00000017993rpa19960.000ENSMGAG00000005315RPA19860.000Meleagris_gallopavo
ENSMAMG00000017993rpa19962.738ENSMAUG00000010474Rpa19863.898Mesocricetus_auratus
ENSMAMG00000017993rpa19963.770ENSMICG00000012867RPA19963.770Microcebus_murinus
ENSMAMG00000017993rpa19962.397ENSMOCG00000013019Rpa19962.397Microtus_ochrogaster
ENSMAMG00000017993rpa110082.833ENSMMOG00000014292rpa110084.655Mola_mola
ENSMAMG00000017993rpa19963.102ENSMMOG00000010868RPA19861.603Mola_mola
ENSMAMG00000017993rpa19962.316ENSMODG00000010549RPA19962.316Monodelphis_domestica
ENSMAMG00000017993rpa19970.776ENSMALG00000001208RPA18670.776Monopterus_albus
ENSMAMG00000017993rpa110090.500ENSMALG00000011453rpa110090.500Monopterus_albus
ENSMAMG00000017993rpa19961.990MGP_CAROLIEiJ_G0016734Rpa19962.418Mus_caroli
ENSMAMG00000017993rpa19961.003ENSMUSG00000000751Rpa19961.426Mus_musculus
ENSMAMG00000017993rpa19961.951MGP_PahariEiJ_G0017871Rpa19962.378Mus_pahari
ENSMAMG00000017993rpa19960.905MGP_SPRETEiJ_G0017577Rpa19961.327Mus_spretus
ENSMAMG00000017993rpa19963.115ENSMPUG00000013119RPA19963.115Mustela_putorius_furo
ENSMAMG00000017993rpa19962.931ENSMLUG00000006113RPA19962.723Myotis_lucifugus
ENSMAMG00000017993rpa19962.414ENSNGAG00000004522Rpa19463.605Nannospalax_galili
ENSMAMG00000017993rpa19959.612ENSNBRG00000009672RPA19759.832Neolamprologus_brichardi
ENSMAMG00000017993rpa19988.036ENSNBRG00000020595rpa19988.036Neolamprologus_brichardi
ENSMAMG00000017993rpa19963.355ENSNLEG00000017149RPA19963.458Nomascus_leucogenys
ENSMAMG00000017993rpa19953.713ENSMEUG00000006714RPA19754.484Notamacropus_eugenii
ENSMAMG00000017993rpa19961.121ENSODEG00000009038RPA19762.040Octodon_degus
ENSMAMG00000017993rpa19987.908ENSONIG00000013135rpa19987.908Oreochromis_niloticus
ENSMAMG00000017993rpa19962.887ENSOANG00000010880RPA19864.094Ornithorhynchus_anatinus
ENSMAMG00000017993rpa19960.998ENSOCUG00000001504RPA19960.998Oryctolagus_cuniculus
ENSMAMG00000017993rpa19964.783ENSORLG00000003368RPA19956.615Oryzias_latipes
ENSMAMG00000017993rpa19985.452ENSORLG00000004856rpa19985.452Oryzias_latipes
ENSMAMG00000017993rpa19964.130ENSORLG00020015284RPA19954.079Oryzias_latipes_hni
ENSMAMG00000017993rpa19985.619ENSORLG00020008980rpa19985.619Oryzias_latipes_hni
ENSMAMG00000017993rpa17963.869ENSORLG00015005867-9863.869Oryzias_latipes_hsok
ENSMAMG00000017993rpa19957.210ENSORLG00015020383RPA19957.210Oryzias_latipes_hsok
ENSMAMG00000017993rpa19985.619ENSORLG00015013982rpa19985.619Oryzias_latipes_hsok
ENSMAMG00000017993rpa19958.615ENSOMEG00000011040RPA19958.615Oryzias_melastigma
ENSMAMG00000017993rpa19981.803ENSOMEG00000004704rpa110081.803Oryzias_melastigma
ENSMAMG00000017993rpa19962.908ENSOGAG00000005581-9962.908Otolemur_garnettii
ENSMAMG00000017993rpa17573.626ENSOGAG00000029379-9873.626Otolemur_garnettii
ENSMAMG00000017993rpa19962.848ENSOARG00000014479RPA19963.011Ovis_aries
ENSMAMG00000017993rpa19963.518ENSPPAG00000039680RPA19963.622Pan_paniscus
ENSMAMG00000017993rpa19962.029ENSPPRG00000011807RPA19962.029Panthera_pardus
ENSMAMG00000017993rpa19962.029ENSPTIG00000007898RPA19962.029Panthera_tigris_altaica
ENSMAMG00000017993rpa19963.844ENSPTRG00000008539RPA19963.948Pan_troglodytes
ENSMAMG00000017993rpa19963.103ENSPANG00000024592RPA19963.132Papio_anubis
ENSMAMG00000017993rpa19973.432ENSPKIG00000008053rpa19974.092Paramormyrops_kingsleyae
ENSMAMG00000017993rpa19961.724ENSPSIG00000015617RPA19862.669Pelodiscus_sinensis
ENSMAMG00000017993rpa19963.139ENSPMGG00000000543RPA19963.129Periophthalmus_magnuspinnatus
ENSMAMG00000017993rpa19986.545ENSPMGG00000011589rpa19786.545Periophthalmus_magnuspinnatus
ENSMAMG00000017993rpa19963.547ENSPEMG00000021061Rpa19963.547Peromyscus_maniculatus_bairdii
ENSMAMG00000017993rpa19961.827ENSPCIG00000019049RPA19961.990Phascolarctos_cinereus
ENSMAMG00000017993rpa110084.526ENSPFOG00000003987rpa110084.526Poecilia_formosa
ENSMAMG00000017993rpa110084.359ENSPLAG00000004984rpa110084.359Poecilia_latipinna
ENSMAMG00000017993rpa19069.630ENSPLAG00000008844-9657.861Poecilia_latipinna
ENSMAMG00000017993rpa19069.136ENSPMEG00000003627-9657.374Poecilia_mexicana
ENSMAMG00000017993rpa110084.692ENSPMEG00000020602rpa110084.692Poecilia_mexicana
ENSMAMG00000017993rpa19670.252ENSPREG00000010119RPA19170.252Poecilia_reticulata
ENSMAMG00000017993rpa19377.281ENSPREG00000010174rpa19577.143Poecilia_reticulata
ENSMAMG00000017993rpa19963.605ENSPCOG00000001799RPA19963.562Propithecus_coquereli
ENSMAMG00000017993rpa19961.401ENSPVAG00000002149RPA19961.401Pteropus_vampyrus
ENSMAMG00000017993rpa19961.102ENSPNYG00000024165RPA19961.102Pundamilia_nyererei
ENSMAMG00000017993rpa19990.333ENSPNYG00000016316rpa19990.333Pundamilia_nyererei
ENSMAMG00000017993rpa110068.366ENSPNAG00000008599rpa19671.030Pygocentrus_nattereri
ENSMAMG00000017993rpa19969.417ENSRNOG00000003123Rpa19963.383Rattus_norvegicus
ENSMAMG00000017993rpa19962.969ENSRBIG00000036587RPA19962.969Rhinopithecus_bieti
ENSMAMG00000017993rpa19958.075ENSRROG00000043278RPA19958.075Rhinopithecus_roxellana
ENSMAMG00000017993rpa19532.715YAR007CRFA19432.715Saccharomyces_cerevisiae
ENSMAMG00000017993rpa19663.214ENSSBOG00000030233RPA19765.241Saimiri_boliviensis_boliviensis
ENSMAMG00000017993rpa19962.371ENSSHAG00000007969RPA19563.805Sarcophilus_harrisii
ENSMAMG00000017993rpa19980.399ENSSFOG00015005362rpa19280.399Scleropages_formosus
ENSMAMG00000017993rpa19869.635ENSSMAG00000019746RPA19957.839Scophthalmus_maximus
ENSMAMG00000017993rpa19670.602ENSSDUG00000016358RPA19265.235Seriola_dumerili
ENSMAMG00000017993rpa110091.000ENSSDUG00000011949rpa110091.000Seriola_dumerili
ENSMAMG00000017993rpa110091.167ENSSLDG00000011806rpa110091.167Seriola_lalandi_dorsalis
ENSMAMG00000017993rpa19669.907ENSSLDG00000020784RPA18569.438Seriola_lalandi_dorsalis
ENSMAMG00000017993rpa18875.758ENSSARG00000007506RPA18775.758Sorex_araneus
ENSMAMG00000017993rpa19960.417ENSSPUG00000007223RPA19861.565Sphenodon_punctatus
ENSMAMG00000017993rpa110089.500ENSSPAG00000009903rpa110089.500Stegastes_partitus
ENSMAMG00000017993rpa19963.815ENSSPAG00000011165RPA19863.113Stegastes_partitus
ENSMAMG00000017993rpa19966.302ENSSSCG00000017822RPA19962.957Sus_scrofa
ENSMAMG00000017993rpa19960.691ENSTGUG00000005775RPA19960.691Taeniopygia_guttata
ENSMAMG00000017993rpa110084.667ENSTRUG00000003616rpa110084.667Takifugu_rubripes
ENSMAMG00000017993rpa19968.925ENSTRUG00000000405RPA18668.578Takifugu_rubripes
ENSMAMG00000017993rpa110085.784ENSTNIG00000016199rpa19986.230Tetraodon_nigroviridis
ENSMAMG00000017993rpa18070.023ENSTBEG00000002709RPA17370.023Tupaia_belangeri
ENSMAMG00000017993rpa19962.193ENSTTRG00000001169RPA19962.357Tursiops_truncatus
ENSMAMG00000017993rpa18871.154ENSUAMG00000015676RPA19571.154Ursus_americanus
ENSMAMG00000017993rpa19966.058ENSUMAG00000009328RPA19962.833Ursus_maritimus
ENSMAMG00000017993rpa19961.034ENSVPAG00000009443RPA19961.020Vicugna_pacos
ENSMAMG00000017993rpa19962.684ENSVVUG00000021715RPA19963.339Vulpes_vulpes
ENSMAMG00000017993rpa19966.957ENSXETG00000013538rpa19967.603Xenopus_tropicalis
ENSMAMG00000017993rpa19962.909ENSXCOG00000009899-9962.909Xiphophorus_couchianus
ENSMAMG00000017993rpa19382.975ENSXCOG00000010068rpa19482.975Xiphophorus_couchianus
ENSMAMG00000017993rpa19670.023ENSXMAG00000010333RPA18170.023Xiphophorus_maculatus
ENSMAMG00000017993rpa110083.195ENSXMAG00000004102rpa110084.079Xiphophorus_maculatus

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