EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000018146 (Gene tree)
Gene ID: 113130352
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 7695 bases
Position: chrOOHQ01000082.1:18990556-18998250
Accession: 113130352
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000026986	R3H	PF01424.22	5.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000027682	-	3826	-	ENSMAMP00000026986	400 (aa)	XP_026162691	UPI000E45A4ED

Gene Model

Click here to download ENSMAMG00000018146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000018146's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000018146	r3hcc1	98	31.690	ENSG00000104679	R3HCC1	84	40.476	Homo_sapiens
ENSMAMG00000018146	r3hcc1	99	63.366	ENSAPOG00000003616	r3hcc1	89	61.634	Acanthochromis_polyacanthus
ENSMAMG00000018146	r3hcc1	98	31.991	ENSAMEG00000002963	R3HCC1	58	45.161	Ailuropoda_melanoleuca
ENSMAMG00000018146	r3hcc1	100	56.308	ENSACIG00000017144	r3hcc1	95	56.308	Amphilophus_citrinellus
ENSMAMG00000018146	r3hcc1	99	67.079	ENSAOCG00000003945	r3hcc1	96	65.347	Amphiprion_ocellaris
ENSMAMG00000018146	r3hcc1	99	65.347	ENSAPEG00000003613	r3hcc1	96	65.099	Amphiprion_percula
ENSMAMG00000018146	r3hcc1	97	70.951	ENSATEG00000023860	r3hcc1	100	71.852	Anabas_testudineus
ENSMAMG00000018146	r3hcc1	98	32.847	ENSACAG00000016627	R3HCC1	63	45.342	Anolis_carolinensis
ENSMAMG00000018146	r3hcc1	53	50.000	ENSANAG00000036169	R3HCC1	90	32.918	Aotus_nancymaae
ENSMAMG00000018146	r3hcc1	98	33.800	ENSBTAG00000025830	R3HCC1	88	32.947	Bos_taurus
ENSMAMG00000018146	r3hcc1	98	31.266	ENSCJAG00000020118	R3HCC1	90	32.746	Callithrix_jacchus
ENSMAMG00000018146	r3hcc1	98	31.336	ENSCAFG00000009210	R3HCC1	63	40.230	Canis_familiaris
ENSMAMG00000018146	r3hcc1	98	34.597	ENSCHIG00000009107	R3HCC1	91	32.394	Capra_hircus
ENSMAMG00000018146	r3hcc1	98	31.354	ENSTSYG00000000511	R3HCC1	71	31.991	Carlito_syrichta
ENSMAMG00000018146	r3hcc1	66	37.762	ENSCAPG00000015813	R3HCC1	56	37.762	Cavia_aperea
ENSMAMG00000018146	r3hcc1	71	45.455	ENSCPOG00000009696	R3HCC1	56	45.455	Cavia_porcellus
ENSMAMG00000018146	r3hcc1	98	31.980	ENSCCAG00000037811	R3HCC1	90	32.746	Cebus_capucinus
ENSMAMG00000018146	r3hcc1	98	30.275	ENSCATG00000032971	R3HCC1	90	32.234	Cercocebus_atys
ENSMAMG00000018146	r3hcc1	99	33.654	ENSCLAG00000015556	R3HCC1	78	33.097	Chinchilla_lanigera
ENSMAMG00000018146	r3hcc1	98	30.275	ENSCSAG00000016250	R3HCC1	84	32.297	Chlorocebus_sabaeus
ENSMAMG00000018146	r3hcc1	98	31.663	ENSCHOG00000000396	R3HCC1	88	31.818	Choloepus_hoffmanni
ENSMAMG00000018146	r3hcc1	98	32.316	ENSCANG00000029441	R3HCC1	90	32.824	Colobus_angolensis_palliatus
ENSMAMG00000018146	r3hcc1	69	44.937	ENSCGRG00001014977	R3hcc1	59	44.375	Cricetulus_griseus_chok1gshd
ENSMAMG00000018146	r3hcc1	69	44.937	ENSCGRG00000004454	R3hcc1	59	44.375	Cricetulus_griseus_crigri
ENSMAMG00000018146	r3hcc1	100	64.179	ENSCSEG00000005748	r3hcc1	96	63.366	Cynoglossus_semilaevis
ENSMAMG00000018146	r3hcc1	83	51.304	ENSCVAG00000002640	r3hcc1	90	49.855	Cyprinodon_variegatus
ENSMAMG00000018146	r3hcc1	99	43.317	ENSDARG00000099593	r3hcc1	93	42.079	Danio_rerio
ENSMAMG00000018146	r3hcc1	98	30.296	ENSDNOG00000007168	R3HCC1	84	30.787	Dasypus_novemcinctus
ENSMAMG00000018146	r3hcc1	99	30.588	ENSEASG00005018782	R3HCC1	57	38.916	Equus_asinus_asinus
ENSMAMG00000018146	r3hcc1	99	30.445	ENSECAG00000025013	R3HCC1	90	31.163	Equus_caballus
ENSMAMG00000018146	r3hcc1	98	32.952	ENSEEUG00000011918	R3HCC1	88	32.494	Erinaceus_europaeus
ENSMAMG00000018146	r3hcc1	100	49.282	ENSELUG00000023650	r3hcc1	100	49.157	Esox_lucius
ENSMAMG00000018146	r3hcc1	98	33.416	ENSFCAG00000012395	R3HCC1	88	32.779	Felis_catus
ENSMAMG00000018146	r3hcc1	70	39.706	ENSFALG00000001646	R3HCC1	54	39.706	Ficedula_albicollis
ENSMAMG00000018146	r3hcc1	68	43.137	ENSFDAG00000001572	R3HCC1	59	43.137	Fukomys_damarensis
ENSMAMG00000018146	r3hcc1	95	47.458	ENSGMOG00000017590	-	84	47.619	Gadus_morhua
ENSMAMG00000018146	r3hcc1	100	59.901	ENSGAFG00000008747	-	93	58.718	Gambusia_affinis
ENSMAMG00000018146	r3hcc1	98	62.626	ENSGACG00000008447	r3hcc1	90	61.869	Gasterosteus_aculeatus
ENSMAMG00000018146	r3hcc1	98	31.477	ENSGGOG00000013817	R3HCC1	90	32.997	Gorilla_gorilla
ENSMAMG00000018146	r3hcc1	73	68.778	ENSHBUG00000022250	-	92	68.778	Haplochromis_burtoni
ENSMAMG00000018146	r3hcc1	98	32.374	ENSHGLG00000010517	R3HCC1	84	31.159	Heterocephalus_glaber_female
ENSMAMG00000018146	r3hcc1	98	32.374	ENSHGLG00100006388	R3HCC1	84	31.159	Heterocephalus_glaber_male
ENSMAMG00000018146	r3hcc1	98	54.337	ENSHCOG00000011745	r3hcc1	87	55.416	Hippocampus_comes
ENSMAMG00000018146	r3hcc1	99	48.615	ENSIPUG00000024504	r3hcc1	82	50.376	Ictalurus_punctatus
ENSMAMG00000018146	r3hcc1	72	47.170	ENSSTOG00000027130	R3HCC1	63	47.170	Ictidomys_tridecemlineatus
ENSMAMG00000018146	r3hcc1	98	32.798	ENSJJAG00000013075	R3hcc1	92	32.110	Jaculus_jaculus
ENSMAMG00000018146	r3hcc1	100	60.794	ENSKMAG00000000286	r3hcc1	100	59.801	Kryptolebias_marmoratus
ENSMAMG00000018146	r3hcc1	99	35.167	ENSLACG00000011894	R3HCC1	61	47.712	Latimeria_chalumnae
ENSMAMG00000018146	r3hcc1	99	45.477	ENSLOCG00000015442	r3hcc1	96	43.596	Lepisosteus_oculatus
ENSMAMG00000018146	r3hcc1	99	30.105	ENSLAFG00000016137	R3HCC1	89	31.020	Loxodonta_africana
ENSMAMG00000018146	r3hcc1	98	30.046	ENSMFAG00000032894	R3HCC1	90	31.980	Macaca_fascicularis
ENSMAMG00000018146	r3hcc1	61	50.000	ENSMMUG00000016655	R3HCC1	90	32.234	Macaca_mulatta
ENSMAMG00000018146	r3hcc1	98	30.909	ENSMNEG00000043283	R3HCC1	90	32.487	Macaca_nemestrina
ENSMAMG00000018146	r3hcc1	98	30.612	ENSMLEG00000030147	R3HCC1	90	32.487	Mandrillus_leucophaeus
ENSMAMG00000018146	r3hcc1	98	34.917	ENSMGAG00000001356	R3HCC1	84	34.824	Meleagris_gallopavo
ENSMAMG00000018146	r3hcc1	66	45.775	ENSMAUG00000016096	R3hcc1	58	45.270	Mesocricetus_auratus
ENSMAMG00000018146	r3hcc1	98	32.028	ENSMICG00000011146	R3HCC1	90	31.683	Microcebus_murinus
ENSMAMG00000018146	r3hcc1	67	44.898	ENSMOCG00000018508	R3hcc1	56	44.898	Microtus_ochrogaster
ENSMAMG00000018146	r3hcc1	100	69.652	ENSMALG00000000731	r3hcc1	100	70.647	Monopterus_albus
ENSMAMG00000018146	r3hcc1	72	44.898	MGP_CAROLIEiJ_G0019467	R3hcc1	57	45.223	Mus_caroli
ENSMAMG00000018146	r3hcc1	67	44.898	ENSMUSG00000034194	R3hcc1	55	44.898	Mus_musculus
ENSMAMG00000018146	r3hcc1	67	44.595	MGP_PahariEiJ_G0030484	R3hcc1	59	43.678	Mus_pahari
ENSMAMG00000018146	r3hcc1	67	44.898	MGP_SPRETEiJ_G0020359	R3hcc1	55	44.898	Mus_spretus
ENSMAMG00000018146	r3hcc1	98	32.870	ENSMPUG00000003457	R3HCC1	80	31.702	Mustela_putorius_furo
ENSMAMG00000018146	r3hcc1	98	32.009	ENSMLUG00000000266	R3HCC1	84	31.579	Myotis_lucifugus
ENSMAMG00000018146	r3hcc1	65	46.853	ENSNGAG00000016747	R3hcc1	59	47.020	Nannospalax_galili
ENSMAMG00000018146	r3hcc1	90	88.889	ENSNBRG00000016975	-	77	88.889	Neolamprologus_brichardi
ENSMAMG00000018146	r3hcc1	99	33.813	ENSMEUG00000010587	R3HCC1	92	33.333	Notamacropus_eugenii
ENSMAMG00000018146	r3hcc1	99	31.477	ENSOPRG00000013390	R3HCC1	88	32.840	Ochotona_princeps
ENSMAMG00000018146	r3hcc1	68	44.516	ENSODEG00000007529	R3HCC1	61	42.683	Octodon_degus
ENSMAMG00000018146	r3hcc1	98	34.063	ENSOANG00000013877	R3HCC1	89	34.135	Ornithorhynchus_anatinus
ENSMAMG00000018146	r3hcc1	99	31.343	ENSOCUG00000023554	R3HCC1	79	31.421	Oryctolagus_cuniculus
ENSMAMG00000018146	r3hcc1	100	49.015	ENSORLG00000016816	r3hcc1	100	49.257	Oryzias_latipes
ENSMAMG00000018146	r3hcc1	100	49.261	ENSORLG00020012005	r3hcc1	100	49.752	Oryzias_latipes_hni
ENSMAMG00000018146	r3hcc1	100	49.005	ENSORLG00015007018	r3hcc1	100	49.005	Oryzias_latipes_hsok
ENSMAMG00000018146	r3hcc1	100	50.864	ENSOMEG00000000816	r3hcc1	100	50.985	Oryzias_melastigma
ENSMAMG00000018146	r3hcc1	98	33.173	ENSOGAG00000001291	R3HCC1	84	33.333	Otolemur_garnettii
ENSMAMG00000018146	r3hcc1	98	34.651	ENSOARG00000010146	R3HCC1	89	32.648	Ovis_aries
ENSMAMG00000018146	r3hcc1	98	31.604	ENSPPAG00000033165	R3HCC1	91	33.005	Pan_paniscus
ENSMAMG00000018146	r3hcc1	98	32.542	ENSPPRG00000002522	R3HCC1	92	32.779	Panthera_pardus
ENSMAMG00000018146	r3hcc1	94	32.924	ENSPTIG00000011230	R3HCC1	92	33.170	Panthera_tigris_altaica
ENSMAMG00000018146	r3hcc1	98	30.660	ENSPTRG00000020076	R3HCC1	91	32.847	Pan_troglodytes
ENSMAMG00000018146	r3hcc1	98	30.275	ENSPANG00000000453	R3HCC1	90	32.234	Papio_anubis
ENSMAMG00000018146	r3hcc1	96	45.641	ENSPKIG00000014426	-	95	46.015	Paramormyrops_kingsleyae
ENSMAMG00000018146	r3hcc1	96	47.089	ENSPKIG00000020397	-	95	46.482	Paramormyrops_kingsleyae
ENSMAMG00000018146	r3hcc1	98	34.752	ENSPSIG00000017664	R3HCC1	90	34.353	Pelodiscus_sinensis
ENSMAMG00000018146	r3hcc1	52	56.849	ENSPMGG00000007792	r3hcc1	53	56.849	Periophthalmus_magnuspinnatus
ENSMAMG00000018146	r3hcc1	65	46.479	ENSPEMG00000007118	R3hcc1	55	46.479	Peromyscus_maniculatus_bairdii
ENSMAMG00000018146	r3hcc1	96	33.171	ENSPCIG00000022718	-	83	33.575	Phascolarctos_cinereus
ENSMAMG00000018146	r3hcc1	100	59.901	ENSPFOG00000022301	r3hcc1	87	58.168	Poecilia_formosa
ENSMAMG00000018146	r3hcc1	100	59.901	ENSPLAG00000010794	r3hcc1	87	58.168	Poecilia_latipinna
ENSMAMG00000018146	r3hcc1	100	59.901	ENSPMEG00000022515	r3hcc1	87	58.168	Poecilia_mexicana
ENSMAMG00000018146	r3hcc1	100	59.901	ENSPREG00000000713	r3hcc1	87	58.416	Poecilia_reticulata
ENSMAMG00000018146	r3hcc1	94	30.807	ENSPPYG00000018436	R3HCC1	96	31.540	Pongo_abelii
ENSMAMG00000018146	r3hcc1	63	47.727	ENSPCAG00000012229	R3HCC1	56	47.727	Procavia_capensis
ENSMAMG00000018146	r3hcc1	98	32.028	ENSPCOG00000027554	R3HCC1	91	32.067	Propithecus_coquereli
ENSMAMG00000018146	r3hcc1	99	32.870	ENSPVAG00000009829	R3HCC1	89	33.099	Pteropus_vampyrus
ENSMAMG00000018146	r3hcc1	96	47.194	ENSPNAG00000023875	r3hcc1	94	47.938	Pygocentrus_nattereri
ENSMAMG00000018146	r3hcc1	98	31.043	ENSRBIG00000028045	R3HCC1	90	31.899	Rhinopithecus_bieti
ENSMAMG00000018146	r3hcc1	98	30.496	ENSRROG00000031126	R3HCC1	90	31.899	Rhinopithecus_roxellana
ENSMAMG00000018146	r3hcc1	98	32.084	ENSSBOG00000022590	R3HCC1	91	31.840	Saimiri_boliviensis_boliviensis
ENSMAMG00000018146	r3hcc1	99	49.015	ENSSFOG00015013507	r3hcc1	100	48.030	Scleropages_formosus
ENSMAMG00000018146	r3hcc1	100	70.617	ENSSMAG00000008647	r3hcc1	100	70.617	Scophthalmus_maximus
ENSMAMG00000018146	r3hcc1	100	77.778	ENSSDUG00000022786	r3hcc1	94	77.778	Seriola_dumerili
ENSMAMG00000018146	r3hcc1	100	77.284	ENSSLDG00000019031	r3hcc1	94	77.284	Seriola_lalandi_dorsalis
ENSMAMG00000018146	r3hcc1	99	66.749	ENSSPAG00000013497	r3hcc1	96	66.253	Stegastes_partitus
ENSMAMG00000018146	r3hcc1	99	33.176	ENSSSCG00000039915	-	89	32.203	Sus_scrofa
ENSMAMG00000018146	r3hcc1	99	30.425	ENSSSCG00000037347	-	50	44.444	Sus_scrofa
ENSMAMG00000018146	r3hcc1	100	51.750	ENSTRUG00000015880	r3hcc1	95	52.250	Takifugu_rubripes
ENSMAMG00000018146	r3hcc1	98	31.540	ENSUAMG00000007344	R3HCC1	91	31.643	Ursus_americanus
ENSMAMG00000018146	r3hcc1	98	31.905	ENSVVUG00000005056	R3HCC1	87	31.075	Vulpes_vulpes
ENSMAMG00000018146	r3hcc1	97	55.612	ENSXCOG00000017626	r3hcc1	86	55.612	Xiphophorus_couchianus
ENSMAMG00000018146	r3hcc1	100	59.158	ENSXMAG00000018375	r3hcc1	93	59.487	Xiphophorus_maculatus