EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000018276 (Gene tree)
Gene ID: 113142035
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 15261 bases
Position: chrOOHQ01000056.1:14839310-14854570
Accession: 113142035
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000027225	Upf2	PF04050.14	2.5e-32	1	1
ENSMAMP00000027236	Upf2	PF04050.14	3.9e-32	1	1
ENSMAMP00000027236	MIF4G	PF02854.19	2.9e-75	1	3
ENSMAMP00000027236	MIF4G	PF02854.19	2.9e-75	2	3
ENSMAMP00000027236	MIF4G	PF02854.19	2.9e-75	3	3
ENSMAMP00000027225	MIF4G	PF02854.19	3e-75	1	3
ENSMAMP00000027225	MIF4G	PF02854.19	3e-75	2	3
ENSMAMP00000027225	MIF4G	PF02854.19	3e-75	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000027943	UPF2-202	3735	-	ENSMAMP00000027236	1244 (aa)	-	-
ENSMAMT00000027932	UPF2-201	5950	XM_026326777	ENSMAMP00000027225	1277 (aa)	XP_026182562	UPI000E45D1D9

Gene Model

Click here to download ENSMAMG00000018276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000018276's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000018276	UPF2	100	82.257	ENSG00000151461	UPF2	100	82.129	Homo_sapiens
ENSMAMG00000018276	UPF2	100	92.486	ENSAPOG00000015837	UPF2	100	92.382	Acanthochromis_polyacanthus
ENSMAMG00000018276	UPF2	100	82.710	ENSAMEG00000004586	UPF2	100	82.582	Ailuropoda_melanoleuca
ENSMAMG00000018276	UPF2	99	96.787	ENSACIG00000018078	UPF2	100	96.787	Amphilophus_citrinellus
ENSMAMG00000018276	UPF2	100	96.635	ENSAOCG00000016766	UPF2	100	96.635	Amphiprion_ocellaris
ENSMAMG00000018276	UPF2	100	96.714	ENSAPEG00000019084	UPF2	100	96.714	Amphiprion_percula
ENSMAMG00000018276	UPF2	100	96.714	ENSATEG00000021677	UPF2	99	96.714	Anabas_testudineus
ENSMAMG00000018276	UPF2	100	80.079	ENSAPLG00000010287	UPF2	90	85.013	Anas_platyrhynchos
ENSMAMG00000018276	UPF2	100	82.632	ENSACAG00000009259	UPF2	100	82.582	Anolis_carolinensis
ENSMAMG00000018276	UPF2	91	79.127	ENSANAG00000028451	UPF2	93	79.064	Aotus_nancymaae
ENSMAMG00000018276	UPF2	100	96.635	ENSACLG00000012696	UPF2	100	96.635	Astatotilapia_calliptera
ENSMAMG00000018276	UPF2	99	89.062	ENSAMXG00000013700	UPF2	99	88.906	Astyanax_mexicanus
ENSMAMG00000018276	UPF2	100	82.710	ENSBTAG00000000288	UPF2	100	82.426	Bos_taurus
ENSMAMG00000018276	UPF2	100	82.087	ENSCJAG00000020685	UPF2	100	81.415	Callithrix_jacchus
ENSMAMG00000018276	UPF2	100	82.788	ENSCAFG00000004839	UPF2	100	82.659	Canis_familiaris
ENSMAMG00000018276	UPF2	100	82.654	ENSCAFG00020005882	UPF2	99	86.500	Canis_lupus_dingo
ENSMAMG00000018276	UPF2	100	82.710	ENSCHIG00000020359	UPF2	100	82.582	Capra_hircus
ENSMAMG00000018276	UPF2	100	82.321	ENSTSYG00000000935	UPF2	97	85.556	Carlito_syrichta
ENSMAMG00000018276	UPF2	91	74.381	ENSCAPG00000016658	UPF2	95	74.702	Cavia_aperea
ENSMAMG00000018276	UPF2	99	79.749	ENSCPOG00000008809	UPF2	100	79.702	Cavia_porcellus
ENSMAMG00000018276	UPF2	100	75.701	ENSCCAG00000035991	UPF2	100	75.117	Cebus_capucinus
ENSMAMG00000018276	UPF2	100	82.412	ENSCATG00000032679	UPF2	100	82.284	Cercocebus_atys
ENSMAMG00000018276	UPF2	100	81.606	ENSCLAG00000011434	UPF2	100	81.556	Chinchilla_lanigera
ENSMAMG00000018276	UPF2	100	82.412	ENSCSAG00000013372	UPF2	100	82.284	Chlorocebus_sabaeus
ENSMAMG00000018276	UPF2	80	89.135	ENSCHOG00000000422	UPF2	81	87.805	Choloepus_hoffmanni
ENSMAMG00000018276	UPF2	99	81.392	ENSCPBG00000027823	UPF2	100	80.406	Chrysemys_picta_bellii
ENSMAMG00000018276	UPF2	79	49.706	ENSCSAVG00000007772	-	99	49.507	Ciona_savignyi
ENSMAMG00000018276	UPF2	100	77.026	ENSCANG00000040396	UPF2	100	77.605	Colobus_angolensis_palliatus
ENSMAMG00000018276	UPF2	100	82.243	ENSCGRG00001019347	Upf2	100	82.115	Cricetulus_griseus_chok1gshd
ENSMAMG00000018276	UPF2	100	82.243	ENSCGRG00000017993	Upf2	100	82.115	Cricetulus_griseus_crigri
ENSMAMG00000018276	UPF2	99	87.500	ENSCSEG00000003520	UPF2	99	87.920	Cynoglossus_semilaevis
ENSMAMG00000018276	UPF2	99	92.271	ENSCVAG00000006167	UPF2	100	91.719	Cyprinodon_variegatus
ENSMAMG00000018276	UPF2	100	82.710	ENSDNOG00000018160	UPF2	100	82.582	Dasypus_novemcinctus
ENSMAMG00000018276	UPF2	100	82.321	ENSDORG00000002478	Upf2	100	82.271	Dipodomys_ordii
ENSMAMG00000018276	UPF2	90	36.252	FBgn0029992	Upf2	90	39.956	Drosophila_melanogaster
ENSMAMG00000018276	UPF2	73	91.971	ENSETEG00000011583	-	63	91.971	Echinops_telfairi
ENSMAMG00000018276	UPF2	66	71.523	ENSEBUG00000012448	-	97	68.610	Eptatretus_burgeri
ENSMAMG00000018276	UPF2	100	81.995	ENSEASG00005019274	UPF2	100	82.135	Equus_asinus_asinus
ENSMAMG00000018276	UPF2	100	81.995	ENSECAG00000017022	UPF2	100	81.946	Equus_caballus
ENSMAMG00000018276	UPF2	82	75.000	ENSEEUG00000007819	UPF2	74	74.960	Erinaceus_europaeus
ENSMAMG00000018276	UPF2	99	88.066	ENSELUG00000012014	UPF2	100	90.718	Esox_lucius
ENSMAMG00000018276	UPF2	100	85.792	ENSFCAG00000005785	UPF2	100	82.504	Felis_catus
ENSMAMG00000018276	UPF2	100	83.735	ENSFALG00000001889	UPF2	98	83.735	Ficedula_albicollis
ENSMAMG00000018276	UPF2	100	80.997	ENSFDAG00000014348	UPF2	100	80.919	Fukomys_damarensis
ENSMAMG00000018276	UPF2	99	94.479	ENSFHEG00000009826	UPF2	100	94.006	Fundulus_heteroclitus
ENSMAMG00000018276	UPF2	91	89.819	ENSGMOG00000005557	UPF2	100	87.938	Gadus_morhua
ENSMAMG00000018276	UPF2	100	83.683	ENSGALG00000033772	UPF2	100	83.904	Gallus_gallus
ENSMAMG00000018276	UPF2	100	93.271	ENSGAFG00000020867	UPF2	100	91.080	Gambusia_affinis
ENSMAMG00000018276	UPF2	91	92.679	ENSGACG00000001080	UPF2	100	93.208	Gasterosteus_aculeatus
ENSMAMG00000018276	UPF2	100	82.243	ENSGAGG00000002700	UPF2	100	82.037	Gopherus_agassizii
ENSMAMG00000018276	UPF2	100	82.257	ENSGGOG00000001479	UPF2	100	82.129	Gorilla_gorilla
ENSMAMG00000018276	UPF2	100	96.557	ENSHBUG00000004249	UPF2	100	96.708	Haplochromis_burtoni
ENSMAMG00000018276	UPF2	100	81.294	ENSHGLG00000015176	-	100	81.245	Heterocephalus_glaber_female
ENSMAMG00000018276	UPF2	99	72.521	ENSHGLG00000003822	-	99	71.250	Heterocephalus_glaber_female
ENSMAMG00000018276	UPF2	99	79.001	ENSHGLG00100010036	UPF2	100	76.971	Heterocephalus_glaber_male
ENSMAMG00000018276	UPF2	100	91.504	ENSHCOG00000004025	UPF2	99	91.348	Hippocampus_comes
ENSMAMG00000018276	UPF2	100	87.598	ENSIPUG00000015524	UPF2	100	85.023	Ictalurus_punctatus
ENSMAMG00000018276	UPF2	100	82.321	ENSSTOG00000013075	UPF2	100	82.193	Ictidomys_tridecemlineatus
ENSMAMG00000018276	UPF2	100	81.323	ENSJJAG00000004913	Upf2	100	81.634	Jaculus_jaculus
ENSMAMG00000018276	UPF2	99	94.558	ENSKMAG00000001071	UPF2	100	94.558	Kryptolebias_marmoratus
ENSMAMG00000018276	UPF2	100	95.227	ENSLBEG00000016394	-	99	93.818	Labrus_bergylta
ENSMAMG00000018276	UPF2	82	92.240	ENSLBEG00000000728	-	94	90.313	Labrus_bergylta
ENSMAMG00000018276	UPF2	99	76.475	ENSLACG00000015945	UPF2	100	76.708	Latimeria_chalumnae
ENSMAMG00000018276	UPF2	99	85.972	ENSLOCG00000015698	UPF2	100	88.365	Lepisosteus_oculatus
ENSMAMG00000018276	UPF2	100	82.412	ENSMFAG00000043865	UPF2	100	82.284	Macaca_fascicularis
ENSMAMG00000018276	UPF2	100	82.412	ENSMMUG00000008241	UPF2	100	82.284	Macaca_mulatta
ENSMAMG00000018276	UPF2	81	83.694	ENSMNEG00000008062	UPF2	99	83.595	Macaca_nemestrina
ENSMAMG00000018276	UPF2	99	78.251	ENSMLEG00000036120	UPF2	100	79.922	Mandrillus_leucophaeus
ENSMAMG00000018276	UPF2	100	96.635	ENSMZEG00005021595	UPF2	100	96.635	Maylandia_zebra
ENSMAMG00000018276	UPF2	99	83.216	ENSMGAG00000004573	UPF2	99	83.281	Meleagris_gallopavo
ENSMAMG00000018276	UPF2	100	80.218	ENSMAUG00000016512	Upf2	100	80.093	Mesocricetus_auratus
ENSMAMG00000018276	UPF2	100	82.574	ENSMICG00000001716	UPF2	99	86.000	Microcebus_murinus
ENSMAMG00000018276	UPF2	100	81.684	ENSMOCG00000008263	Upf2	100	81.712	Microtus_ochrogaster
ENSMAMG00000018276	UPF2	100	93.253	ENSMMOG00000006528	UPF2	100	93.414	Mola_mola
ENSMAMG00000018276	UPF2	100	80.296	ENSMODG00000016794	UPF2	100	82.737	Monodelphis_domestica
ENSMAMG00000018276	UPF2	99	95.298	ENSMALG00000002663	UPF2	100	95.298	Monopterus_albus
ENSMAMG00000018276	UPF2	100	82.165	MGP_CAROLIEiJ_G0023157	Upf2	99	84.416	Mus_caroli
ENSMAMG00000018276	UPF2	100	82.477	ENSMUSG00000043241	Upf2	100	82.271	Mus_musculus
ENSMAMG00000018276	UPF2	100	82.477	MGP_PahariEiJ_G0019217	Upf2	100	83.146	Mus_pahari
ENSMAMG00000018276	UPF2	100	82.710	MGP_SPRETEiJ_G0024075	Upf2	100	83.146	Mus_spretus
ENSMAMG00000018276	UPF2	100	82.632	ENSMPUG00000001064	UPF2	100	82.504	Mustela_putorius_furo
ENSMAMG00000018276	UPF2	99	82.243	ENSMLUG00000000228	UPF2	100	82.453	Myotis_lucifugus
ENSMAMG00000018276	UPF2	100	96.714	ENSNBRG00000013629	UPF2	100	96.714	Neolamprologus_brichardi
ENSMAMG00000018276	UPF2	100	82.335	ENSNLEG00000012058	UPF2	100	82.207	Nomascus_leucogenys
ENSMAMG00000018276	UPF2	72	93.662	ENSOPRG00000006801	-	73	93.662	Ochotona_princeps
ENSMAMG00000018276	UPF2	100	81.231	ENSODEG00000001290	UPF2	100	81.231	Octodon_degus
ENSMAMG00000018276	UPF2	100	96.322	ENSONIG00000017991	UPF2	100	96.322	Oreochromis_niloticus
ENSMAMG00000018276	UPF2	99	81.415	ENSOCUG00000006230	UPF2	100	79.891	Oryctolagus_cuniculus
ENSMAMG00000018276	UPF2	100	92.416	ENSORLG00000017189	UPF2	100	92.494	Oryzias_latipes
ENSMAMG00000018276	UPF2	100	92.416	ENSORLG00020005969	UPF2	100	92.494	Oryzias_latipes_hni
ENSMAMG00000018276	UPF2	100	92.416	ENSORLG00015005713	UPF2	100	92.494	Oryzias_latipes_hsok
ENSMAMG00000018276	UPF2	99	89.263	ENSOMEG00000023420	UPF2	98	89.028	Oryzias_melastigma
ENSMAMG00000018276	UPF2	100	82.866	ENSOGAG00000005796	UPF2	100	82.115	Otolemur_garnettii
ENSMAMG00000018276	UPF2	100	82.582	ENSOARG00000014587	UPF2	100	82.453	Ovis_aries
ENSMAMG00000018276	UPF2	99	77.632	ENSPPAG00000037953	UPF2	100	79.300	Pan_paniscus
ENSMAMG00000018276	UPF2	100	82.632	ENSPPRG00000000690	UPF2	100	82.504	Panthera_pardus
ENSMAMG00000018276	UPF2	100	82.632	ENSPTIG00000008867	UPF2	100	82.504	Panthera_tigris_altaica
ENSMAMG00000018276	UPF2	100	82.257	ENSPTRG00000002291	UPF2	100	82.129	Pan_troglodytes
ENSMAMG00000018276	UPF2	100	82.412	ENSPANG00000023399	UPF2	100	82.284	Papio_anubis
ENSMAMG00000018276	UPF2	100	87.704	ENSPKIG00000025502	UPF2	100	87.763	Paramormyrops_kingsleyae
ENSMAMG00000018276	UPF2	60	81.028	ENSPSIG00000015158	UPF2	95	80.896	Pelodiscus_sinensis
ENSMAMG00000018276	UPF2	99	89.577	ENSPMGG00000005259	UPF2	100	90.439	Periophthalmus_magnuspinnatus
ENSMAMG00000018276	UPF2	93	75.504	ENSPEMG00000015731	Upf2	99	75.504	Peromyscus_maniculatus_bairdii
ENSMAMG00000018276	UPF2	100	82.724	ENSPCIG00000006656	UPF2	100	82.724	Phascolarctos_cinereus
ENSMAMG00000018276	UPF2	100	93.662	ENSPFOG00000017118	UPF2	100	91.628	Poecilia_formosa
ENSMAMG00000018276	UPF2	100	93.740	ENSPLAG00000005094	UPF2	100	91.706	Poecilia_latipinna
ENSMAMG00000018276	UPF2	100	93.584	ENSPMEG00000017009	UPF2	100	91.549	Poecilia_mexicana
ENSMAMG00000018276	UPF2	99	91.536	ENSPREG00000021880	UPF2	100	91.536	Poecilia_reticulata
ENSMAMG00000018276	UPF2	66	84.734	ENSPPYG00000002089	-	100	84.652	Pongo_abelii
ENSMAMG00000018276	UPF2	100	70.428	ENSPCAG00000000684	UPF2	100	70.584	Procavia_capensis
ENSMAMG00000018276	UPF2	100	81.695	ENSPCOG00000021656	UPF2	100	81.006	Propithecus_coquereli
ENSMAMG00000018276	UPF2	100	76.109	ENSPVAG00000017286	UPF2	100	75.991	Pteropus_vampyrus
ENSMAMG00000018276	UPF2	99	94.122	ENSPNYG00000017096	UPF2	100	94.122	Pundamilia_nyererei
ENSMAMG00000018276	UPF2	100	89.019	ENSPNAG00000009357	UPF2	100	89.408	Pygocentrus_nattereri
ENSMAMG00000018276	UPF2	99	78.322	ENSRNOG00000023593	Upf2	100	94.444	Rattus_norvegicus
ENSMAMG00000018276	UPF2	99	81.279	ENSRBIG00000037780	UPF2	100	81.075	Rhinopithecus_bieti
ENSMAMG00000018276	UPF2	100	82.257	ENSRROG00000043547	UPF2	100	82.051	Rhinopithecus_roxellana
ENSMAMG00000018276	UPF2	100	81.776	ENSSBOG00000020012	UPF2	100	81.026	Saimiri_boliviensis_boliviensis
ENSMAMG00000018276	UPF2	100	86.817	ENSSFOG00015023788	upf2	100	86.651	Scleropages_formosus
ENSMAMG00000018276	UPF2	90	92.201	ENSSMAG00000007637	UPF2	100	91.867	Scophthalmus_maximus
ENSMAMG00000018276	UPF2	100	96.792	ENSSDUG00000017244	UPF2	99	96.792	Seriola_dumerili
ENSMAMG00000018276	UPF2	100	96.064	ENSSLDG00000016866	UPF2	100	96.064	Seriola_lalandi_dorsalis
ENSMAMG00000018276	UPF2	100	81.401	ENSSARG00000008615	UPF2	100	80.808	Sorex_araneus
ENSMAMG00000018276	UPF2	100	80.511	ENSSPUG00000014544	UPF2	99	79.872	Sphenodon_punctatus
ENSMAMG00000018276	UPF2	68	84.493	ENSSSCG00000011117	-	99	84.414	Sus_scrofa
ENSMAMG00000018276	UPF2	99	83.450	ENSTGUG00000002163	-	100	83.398	Taeniopygia_guttata
ENSMAMG00000018276	UPF2	100	91.706	ENSTRUG00000007519	UPF2	99	92.958	Takifugu_rubripes
ENSMAMG00000018276	UPF2	100	89.679	ENSTNIG00000004453	UPF2	100	89.679	Tetraodon_nigroviridis
ENSMAMG00000018276	UPF2	93	73.596	ENSTBEG00000012679	UPF2	93	74.226	Tupaia_belangeri
ENSMAMG00000018276	UPF2	100	81.528	ENSTTRG00000016388	UPF2	100	81.479	Tursiops_truncatus
ENSMAMG00000018276	UPF2	88	94.382	ENSUAMG00000023560	UPF2	98	94.382	Ursus_americanus
ENSMAMG00000018276	UPF2	100	82.710	ENSUMAG00000012953	UPF2	95	82.582	Ursus_maritimus
ENSMAMG00000018276	UPF2	84	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSMAMG00000018276	UPF2	100	82.788	ENSVVUG00000006166	UPF2	100	82.737	Vulpes_vulpes
ENSMAMG00000018276	UPF2	100	78.846	ENSXETG00000033103	UPF2	91	84.192	Xenopus_tropicalis
ENSMAMG00000018276	UPF2	99	93.495	ENSXCOG00000011604	UPF2	100	91.301	Xiphophorus_couchianus
ENSMAMG00000018276	UPF2	100	93.662	ENSXMAG00000017209	UPF2	100	91.471	Xiphophorus_maculatus