EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000018407 (Gene tree)
Gene ID: 113145481
Gene Symbol: tsen34
Alias: si:ch211-203b8.3
Full Name: tRNA splicing endonuclease subunit 34
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 11028 bases
Position: chrOOHQ01000107.1:44329224-44340251
Accession: 113145481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000027387	tRNA_int_endo	PF01974.17	1.1e-15	1	1
ENSMAMP00000027392	tRNA_int_endo	PF01974.17	1.1e-15	1	1
ENSMAMP00000027417	tRNA_int_endo	PF01974.17	1.2e-15	1	1
ENSMAMP00000027434	tRNA_int_endo	PF01974.17	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000028103	-	6034	-	ENSMAMP00000027392	282 (aa)	XP_026188054	UPI000E45C191
ENSMAMT00000028128	-	891	-	ENSMAMP00000027417	296 (aa)	-	-
ENSMAMT00000028098	-	6173	-	ENSMAMP00000027387	282 (aa)	XP_026188054	UPI000E45C191
ENSMAMT00000028145	-	927	-	ENSMAMP00000027434	308 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000018407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000018407's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000018407	tsen34	95	38.217	ENSG00000170892	TSEN34	99	39.623	Homo_sapiens
ENSMAMG00000018407	tsen34	94	76.604	ENSAPOG00000012557	-	90	75.472	Acanthochromis_polyacanthus
ENSMAMG00000018407	tsen34	99	72.043	ENSAPOG00000008579	-	97	74.632	Acanthochromis_polyacanthus
ENSMAMG00000018407	tsen34	100	75.779	ENSAPOG00000001248	tsen34	98	74.740	Acanthochromis_polyacanthus
ENSMAMG00000018407	tsen34	87	37.500	ENSAMEG00000004585	TSEN34	100	37.457	Ailuropoda_melanoleuca
ENSMAMG00000018407	tsen34	99	76.325	ENSACIG00000007110	tsen34	96	71.186	Amphilophus_citrinellus
ENSMAMG00000018407	tsen34	100	75.433	ENSAOCG00000006905	tsen34	98	75.433	Amphiprion_ocellaris
ENSMAMG00000018407	tsen34	100	75.087	ENSAPEG00000019171	tsen34	98	74.048	Amphiprion_percula
ENSMAMG00000018407	tsen34	100	77.032	ENSATEG00000019800	tsen34	100	77.385	Anabas_testudineus
ENSMAMG00000018407	tsen34	96	40.193	ENSACAG00000016189	TSEN34	99	40.764	Anolis_carolinensis
ENSMAMG00000018407	tsen34	95	38.217	ENSANAG00000026113	TSEN34	99	39.308	Aotus_nancymaae
ENSMAMG00000018407	tsen34	97	73.646	ENSACLG00000009661	tsen34	94	75.451	Astatotilapia_calliptera
ENSMAMG00000018407	tsen34	98	57.544	ENSAMXG00000017568	tsen34	91	56.897	Astyanax_mexicanus
ENSMAMG00000018407	tsen34	95	36.825	ENSBTAG00000006486	TSEN34	99	36.741	Bos_taurus
ENSMAMG00000018407	tsen34	95	39.667	ENSCJAG00000001128	TSEN34	99	41.060	Callithrix_jacchus
ENSMAMG00000018407	tsen34	95	37.025	ENSCAFG00000002675	TSEN34	99	37.580	Canis_familiaris
ENSMAMG00000018407	tsen34	95	36.943	ENSCAFG00020018350	TSEN34	99	37.821	Canis_lupus_dingo
ENSMAMG00000018407	tsen34	95	37.864	ENSCHIG00000020705	TSEN34	99	37.785	Capra_hircus
ENSMAMG00000018407	tsen34	93	35.065	ENSTSYG00000028200	TSEN34	97	37.299	Carlito_syrichta
ENSMAMG00000018407	tsen34	50	49.655	ENSCAPG00000012811	-	67	50.725	Cavia_aperea
ENSMAMG00000018407	tsen34	95	38.487	ENSCPOG00000012672	TSEN34	99	39.073	Cavia_porcellus
ENSMAMG00000018407	tsen34	95	39.735	ENSCCAG00000036023	TSEN34	99	40.789	Cebus_capucinus
ENSMAMG00000018407	tsen34	90	36.424	ENSCATG00000033390	TSEN34	93	37.255	Cercocebus_atys
ENSMAMG00000018407	tsen34	95	37.377	ENSCLAG00000000618	TSEN34	99	40.129	Chinchilla_lanigera
ENSMAMG00000018407	tsen34	95	38.217	ENSCSAG00000001891	TSEN34	99	38.994	Chlorocebus_sabaeus
ENSMAMG00000018407	tsen34	95	37.898	ENSCANG00000040984	TSEN34	99	38.679	Colobus_angolensis_palliatus
ENSMAMG00000018407	tsen34	95	37.261	ENSCGRG00001006296	Tsen34	99	39.432	Cricetulus_griseus_chok1gshd
ENSMAMG00000018407	tsen34	99	66.899	ENSCSEG00000006278	tsen34	99	62.662	Cynoglossus_semilaevis
ENSMAMG00000018407	tsen34	99	51.916	ENSDARG00000061370	tsen34	99	50.000	Danio_rerio
ENSMAMG00000018407	tsen34	95	37.540	ENSDORG00000029071	Tsen34	99	37.540	Dipodomys_ordii
ENSMAMG00000018407	tsen34	95	37.898	ENSEASG00005021580	TSEN34	99	38.217	Equus_asinus_asinus
ENSMAMG00000018407	tsen34	95	38.217	ENSECAG00000019651	TSEN34	85	38.535	Equus_caballus
ENSMAMG00000018407	tsen34	96	54.965	ENSELUG00000006262	tsen34	92	54.965	Esox_lucius
ENSMAMG00000018407	tsen34	95	38.217	ENSFCAG00000014045	TSEN34	99	38.291	Felis_catus
ENSMAMG00000018407	tsen34	62	42.132	ENSFDAG00000017995	TSEN34	64	46.707	Fukomys_damarensis
ENSMAMG00000018407	tsen34	100	72.474	ENSFHEG00000008791	tsen34	96	72.822	Fundulus_heteroclitus
ENSMAMG00000018407	tsen34	71	63.500	ENSGMOG00000001961	tsen34	88	66.667	Gadus_morhua
ENSMAMG00000018407	tsen34	100	71.631	ENSGAFG00000016880	tsen34	99	70.567	Gambusia_affinis
ENSMAMG00000018407	tsen34	96	67.577	ENSGACG00000004800	tsen34	99	66.667	Gasterosteus_aculeatus
ENSMAMG00000018407	tsen34	96	43.902	ENSGAGG00000008982	TSEN34	73	43.554	Gopherus_agassizii
ENSMAMG00000018407	tsen34	95	38.511	ENSGGOG00000008197	TSEN34	99	39.936	Gorilla_gorilla
ENSMAMG00000018407	tsen34	97	75.090	ENSHBUG00000016593	tsen34	93	67.208	Haplochromis_burtoni
ENSMAMG00000018407	tsen34	95	37.662	ENSHGLG00000017619	TSEN34	99	38.312	Heterocephalus_glaber_female
ENSMAMG00000018407	tsen34	50	50.345	ENSHGLG00100008719	TSEN34	51	50.345	Heterocephalus_glaber_male
ENSMAMG00000018407	tsen34	100	56.098	ENSHCOG00000001368	tsen34	100	56.140	Hippocampus_comes
ENSMAMG00000018407	tsen34	99	52.189	ENSIPUG00000008359	tsen34	96	50.804	Ictalurus_punctatus
ENSMAMG00000018407	tsen34	92	37.209	ENSSTOG00000023816	TSEN34	96	38.667	Ictidomys_tridecemlineatus
ENSMAMG00000018407	tsen34	95	37.421	ENSJJAG00000016301	Tsen34	99	38.291	Jaculus_jaculus
ENSMAMG00000018407	tsen34	96	75.636	ENSKMAG00000007181	tsen34	94	69.103	Kryptolebias_marmoratus
ENSMAMG00000018407	tsen34	99	77.739	ENSLBEG00000015001	tsen34	98	77.032	Labrus_bergylta
ENSMAMG00000018407	tsen34	95	55.474	ENSLOCG00000001887	tsen34	97	55.474	Lepisosteus_oculatus
ENSMAMG00000018407	tsen34	95	37.500	ENSLAFG00000015215	TSEN34	99	38.509	Loxodonta_africana
ENSMAMG00000018407	tsen34	95	38.217	ENSMFAG00000044825	TSEN34	99	38.994	Macaca_fascicularis
ENSMAMG00000018407	tsen34	95	38.217	ENSMMUG00000016571	TSEN34	99	38.994	Macaca_mulatta
ENSMAMG00000018407	tsen34	95	38.217	ENSMNEG00000045457	TSEN34	99	38.994	Macaca_nemestrina
ENSMAMG00000018407	tsen34	99	75.532	ENSMZEG00005002313	tsen34	96	75.089	Maylandia_zebra
ENSMAMG00000018407	tsen34	88	32.423	ENSMAUG00000019716	Tsen34	88	34.007	Mesocricetus_auratus
ENSMAMG00000018407	tsen34	95	36.422	ENSMICG00000002409	TSEN34	99	38.141	Microcebus_murinus
ENSMAMG00000018407	tsen34	95	36.076	ENSMOCG00000022190	Tsen34	99	38.438	Microtus_ochrogaster
ENSMAMG00000018407	tsen34	96	74.074	ENSMMOG00000009551	tsen34	93	70.769	Mola_mola
ENSMAMG00000018407	tsen34	96	39.809	ENSMODG00000003984	-	77	40.193	Monodelphis_domestica
ENSMAMG00000018407	tsen34	98	80.364	ENSMALG00000018918	tsen34	96	80.364	Monopterus_albus
ENSMAMG00000018407	tsen34	95	38.264	MGP_CAROLIEiJ_G0029099	Tsen34	99	38.658	Mus_caroli
ENSMAMG00000018407	tsen34	95	38.141	ENSMUSG00000035585	Tsen34	99	38.854	Mus_musculus
ENSMAMG00000018407	tsen34	95	38.019	MGP_PahariEiJ_G0020968	Tsen34	99	38.730	Mus_pahari
ENSMAMG00000018407	tsen34	95	38.141	MGP_SPRETEiJ_G0030152	Tsen34	99	38.535	Mus_spretus
ENSMAMG00000018407	tsen34	95	37.421	ENSMPUG00000010373	TSEN34	99	37.736	Mustela_putorius_furo
ENSMAMG00000018407	tsen34	95	37.778	ENSMLUG00000016894	TSEN34	99	38.170	Myotis_lucifugus
ENSMAMG00000018407	tsen34	74	31.873	ENSNGAG00000016187	Tsen34	92	34.646	Nannospalax_galili
ENSMAMG00000018407	tsen34	94	74.088	ENSNBRG00000008640	tsen34	98	73.358	Neolamprologus_brichardi
ENSMAMG00000018407	tsen34	95	38.636	ENSNLEG00000006309	TSEN34	99	40.064	Nomascus_leucogenys
ENSMAMG00000018407	tsen34	92	46.442	ENSMEUG00000002978	TSEN34	96	46.667	Notamacropus_eugenii
ENSMAMG00000018407	tsen34	95	38.199	ENSODEG00000000096	TSEN34	99	37.975	Octodon_degus
ENSMAMG00000018407	tsen34	96	77.536	ENSONIG00000017253	tsen34	100	76.087	Oreochromis_niloticus
ENSMAMG00000018407	tsen34	67	36.607	ENSOANG00000014747	-	71	44.311	Ornithorhynchus_anatinus
ENSMAMG00000018407	tsen34	99	68.683	ENSORLG00015012740	tsen34	98	68.327	Oryzias_latipes_hsok
ENSMAMG00000018407	tsen34	99	71.631	ENSOMEG00000016771	tsen34	97	69.534	Oryzias_melastigma
ENSMAMG00000018407	tsen34	95	39.172	ENSOGAG00000006966	TSEN34	99	39.172	Otolemur_garnettii
ENSMAMG00000018407	tsen34	95	38.217	ENSPPAG00000036935	TSEN34	99	39.623	Pan_paniscus
ENSMAMG00000018407	tsen34	95	38.217	ENSPPRG00000011779	TSEN34	99	38.141	Panthera_pardus
ENSMAMG00000018407	tsen34	95	38.217	ENSPTRG00000011448	TSEN34	99	39.623	Pan_troglodytes
ENSMAMG00000018407	tsen34	95	38.217	ENSPTRG00000044768	-	99	39.623	Pan_troglodytes
ENSMAMG00000018407	tsen34	95	38.217	ENSPANG00000012101	TSEN34	99	38.994	Papio_anubis
ENSMAMG00000018407	tsen34	98	55.914	ENSPKIG00000014674	tsen34	96	56.028	Paramormyrops_kingsleyae
ENSMAMG00000018407	tsen34	95	37.742	ENSPEMG00000014535	Tsen34	99	38.413	Peromyscus_maniculatus_bairdii
ENSMAMG00000018407	tsen34	100	71.579	ENSPFOG00000008679	tsen34	99	70.175	Poecilia_formosa
ENSMAMG00000018407	tsen34	100	72.632	ENSPLAG00000017309	tsen34	99	71.228	Poecilia_latipinna
ENSMAMG00000018407	tsen34	100	71.579	ENSPMEG00000005235	tsen34	99	70.175	Poecilia_mexicana
ENSMAMG00000018407	tsen34	99	71.223	ENSPREG00000021784	tsen34	96	71.062	Poecilia_reticulata
ENSMAMG00000018407	tsen34	95	38.535	ENSPPYG00000010376	TSEN34	94	38.924	Pongo_abelii
ENSMAMG00000018407	tsen34	95	37.261	ENSPCAG00000012359	TSEN34	99	37.975	Procavia_capensis
ENSMAMG00000018407	tsen34	95	38.217	ENSPCOG00000013843	TSEN34	99	38.291	Propithecus_coquereli
ENSMAMG00000018407	tsen34	95	38.065	ENSPVAG00000015570	TSEN34	99	40.064	Pteropus_vampyrus
ENSMAMG00000018407	tsen34	99	75.532	ENSPNYG00000024090	tsen34	75	75.177	Pundamilia_nyererei
ENSMAMG00000018407	tsen34	99	51.020	ENSPNAG00000028698	tsen34	90	51.020	Pygocentrus_nattereri
ENSMAMG00000018407	tsen34	95	38.462	ENSRNOG00000059572	Tsen34l1	99	38.854	Rattus_norvegicus
ENSMAMG00000018407	tsen34	95	38.462	ENSRNOG00000055179	Tsen34	99	38.854	Rattus_norvegicus
ENSMAMG00000018407	tsen34	95	38.710	ENSRBIG00000034430	TSEN34	99	38.782	Rhinopithecus_bieti
ENSMAMG00000018407	tsen34	95	38.710	ENSRROG00000024217	TSEN34	99	39.490	Rhinopithecus_roxellana
ENSMAMG00000018407	tsen34	90	37.417	ENSSBOG00000016017	TSEN34	96	38.361	Saimiri_boliviensis_boliviensis
ENSMAMG00000018407	tsen34	66	56.122	ENSSFOG00015017579	tsen34	78	56.915	Scleropages_formosus
ENSMAMG00000018407	tsen34	99	73.427	ENSSMAG00000005214	tsen34	99	73.077	Scophthalmus_maximus
ENSMAMG00000018407	tsen34	98	77.113	ENSSDUG00000005391	tsen34	96	77.083	Seriola_dumerili
ENSMAMG00000018407	tsen34	99	76.736	ENSSLDG00000006144	tsen34	99	70.227	Seriola_lalandi_dorsalis
ENSMAMG00000018407	tsen34	78	36.567	ENSSARG00000005857	TSEN34	69	36.260	Sorex_araneus
ENSMAMG00000018407	tsen34	96	40.893	ENSSPUG00000008447	TSEN34	99	40.138	Sphenodon_punctatus
ENSMAMG00000018407	tsen34	96	79.197	ENSSPAG00000010512	tsen34	96	75.735	Stegastes_partitus
ENSMAMG00000018407	tsen34	95	37.460	ENSSSCG00000003268	TSEN34	99	37.460	Sus_scrofa
ENSMAMG00000018407	tsen34	96	61.255	ENSTRUG00000000787	tsen34	90	63.258	Takifugu_rubripes
ENSMAMG00000018407	tsen34	96	66.667	ENSTNIG00000011201	tsen34	100	66.107	Tetraodon_nigroviridis
ENSMAMG00000018407	tsen34	96	59.794	ENSTNIG00000001937	-	100	65.753	Tetraodon_nigroviridis
ENSMAMG00000018407	tsen34	95	36.943	ENSTTRG00000006571	TSEN34	99	36.859	Tursiops_truncatus
ENSMAMG00000018407	tsen34	95	36.943	ENSUAMG00000008701	TSEN34	99	37.224	Ursus_americanus
ENSMAMG00000018407	tsen34	95	36.943	ENSVVUG00000008211	TSEN34	99	37.821	Vulpes_vulpes
ENSMAMG00000018407	tsen34	96	39.465	ENSXETG00000004597	tsen34	99	39.597	Xenopus_tropicalis
ENSMAMG00000018407	tsen34	100	73.333	ENSXMAG00000024266	tsen34	99	71.579	Xiphophorus_maculatus