EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000018428 (Gene tree)
Gene ID: 113139417
Gene Symbol: sub1b
Alias: rpo2tc1|sub1|zgc:92831
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 4815 bases
Position: chrOOHQ01000039.1:630873-635687
Accession: 113139417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000027390	PC4	PF02229.16	4.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000028101	-	2510	-	ENSMAMP00000027390	125 (aa)	XP_026178397	UPI000E456E52

Gene Model

Click here to download ENSMAMG00000018428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000018428's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000018428	sub1b	100	66.929	ENSG00000113387	SUB1	100	70.866	Homo_sapiens
ENSMAMG00000018428	sub1b	100	91.200	ENSAPOG00000005917	SUB1	100	91.200	Acanthochromis_polyacanthus
ENSMAMG00000018428	sub1b	100	66.142	ENSAMEG00000006238	SUB1	95	70.079	Ailuropoda_melanoleuca
ENSMAMG00000018428	sub1b	100	96.000	ENSACIG00000015976	sub1b	100	96.000	Amphilophus_citrinellus
ENSMAMG00000018428	sub1b	92	87.826	ENSAOCG00000007313	-	83	94.118	Amphiprion_ocellaris
ENSMAMG00000018428	sub1b	89	77.477	ENSAOCG00000002323	-	86	78.302	Amphiprion_ocellaris
ENSMAMG00000018428	sub1b	100	95.200	ENSAPEG00000024347	sub1b	100	95.200	Amphiprion_percula
ENSMAMG00000018428	sub1b	52	86.154	ENSAPEG00000014618	-	62	86.154	Amphiprion_percula
ENSMAMG00000018428	sub1b	82	82.353	ENSAPEG00000017151	-	76	82.653	Amphiprion_percula
ENSMAMG00000018428	sub1b	100	93.600	ENSATEG00000010340	sub1b	100	93.600	Anabas_testudineus
ENSMAMG00000018428	sub1b	100	65.414	ENSACAG00000007974	SUB1	100	68.421	Anolis_carolinensis
ENSMAMG00000018428	sub1b	100	66.667	ENSANAG00000023392	-	83	70.635	Aotus_nancymaae
ENSMAMG00000018428	sub1b	100	66.929	ENSANAG00000011651	-	100	70.866	Aotus_nancymaae
ENSMAMG00000018428	sub1b	100	96.000	ENSACLG00000016875	sub1b	64	96.000	Astatotilapia_calliptera
ENSMAMG00000018428	sub1b	100	81.746	ENSAMXG00000037104	sub1b	100	78.571	Astyanax_mexicanus
ENSMAMG00000018428	sub1b	100	66.929	ENSBTAG00000021965	SUB1	100	70.866	Bos_taurus
ENSMAMG00000018428	sub1b	51	53.030	WBGene00011743	T13F2.2	50	51.613	Caenorhabditis_elegans
ENSMAMG00000018428	sub1b	80	65.686	ENSCJAG00000018718	SUB1	98	66.667	Callithrix_jacchus
ENSMAMG00000018428	sub1b	100	66.142	ENSCAFG00000018879	-	88	70.079	Canis_familiaris
ENSMAMG00000018428	sub1b	100	66.142	ENSCAFG00000016713	-	96	70.079	Canis_familiaris
ENSMAMG00000018428	sub1b	100	64.800	ENSCAFG00000024488	-	100	64.800	Canis_familiaris
ENSMAMG00000018428	sub1b	100	66.142	ENSCAFG00020016840	-	100	70.079	Canis_lupus_dingo
ENSMAMG00000018428	sub1b	100	71.094	ENSCAFG00020011479	-	77	70.312	Canis_lupus_dingo
ENSMAMG00000018428	sub1b	100	66.929	ENSCHIG00000008460	SUB1	100	70.866	Capra_hircus
ENSMAMG00000018428	sub1b	100	59.843	ENSTSYG00000035366	-	83	63.780	Carlito_syrichta
ENSMAMG00000018428	sub1b	100	61.538	ENSTSYG00000014069	-	93	65.385	Carlito_syrichta
ENSMAMG00000018428	sub1b	100	66.929	ENSTSYG00000029948	-	100	70.866	Carlito_syrichta
ENSMAMG00000018428	sub1b	100	66.929	ENSCPOG00000031334	SUB1	100	70.866	Cavia_porcellus
ENSMAMG00000018428	sub1b	100	66.929	ENSCCAG00000023605	-	100	70.866	Cebus_capucinus
ENSMAMG00000018428	sub1b	100	60.317	ENSCCAG00000017043	-	93	64.286	Cebus_capucinus
ENSMAMG00000018428	sub1b	100	63.780	ENSCCAG00000020604	-	100	64.567	Cebus_capucinus
ENSMAMG00000018428	sub1b	100	64.567	ENSCCAG00000033751	-	95	65.354	Cebus_capucinus
ENSMAMG00000018428	sub1b	100	66.929	ENSCATG00000031199	SUB1	100	70.866	Cercocebus_atys
ENSMAMG00000018428	sub1b	100	65.625	ENSCLAG00000007522	SUB1	100	69.531	Chinchilla_lanigera
ENSMAMG00000018428	sub1b	100	66.929	ENSCSAG00000019449	-	100	69.291	Chlorocebus_sabaeus
ENSMAMG00000018428	sub1b	100	66.929	ENSCSAG00000017172	-	100	70.866	Chlorocebus_sabaeus
ENSMAMG00000018428	sub1b	100	72.222	ENSCPBG00000024218	SUB1	79	73.016	Chrysemys_picta_bellii
ENSMAMG00000018428	sub1b	100	66.929	ENSCANG00000029372	SUB1	100	70.866	Colobus_angolensis_palliatus
ENSMAMG00000018428	sub1b	100	57.143	ENSCANG00000028665	-	90	60.317	Colobus_angolensis_palliatus
ENSMAMG00000018428	sub1b	64	62.069	ENSCGRG00001016254	-	57	72.059	Cricetulus_griseus_chok1gshd
ENSMAMG00000018428	sub1b	100	58.268	ENSCGRG00001014660	-	100	58.268	Cricetulus_griseus_chok1gshd
ENSMAMG00000018428	sub1b	100	65.354	ENSCGRG00001003473	-	100	69.291	Cricetulus_griseus_chok1gshd
ENSMAMG00000018428	sub1b	100	65.354	ENSCGRG00000001133	-	100	69.291	Cricetulus_griseus_crigri
ENSMAMG00000018428	sub1b	100	56.349	ENSCGRG00000001489	-	100	60.317	Cricetulus_griseus_crigri
ENSMAMG00000018428	sub1b	100	58.268	ENSCGRG00000019368	-	100	58.268	Cricetulus_griseus_crigri
ENSMAMG00000018428	sub1b	99	77.419	ENSDARG00000053446	sub1a	100	80.000	Danio_rerio
ENSMAMG00000018428	sub1b	99	80.645	ENSDARG00000007720	sub1b	99	80.645	Danio_rerio
ENSMAMG00000018428	sub1b	100	63.780	ENSDNOG00000032396	-	100	67.717	Dasypus_novemcinctus
ENSMAMG00000018428	sub1b	100	64.567	ENSDNOG00000040794	-	100	68.504	Dasypus_novemcinctus
ENSMAMG00000018428	sub1b	100	66.142	ENSDORG00000013916	Sub1	100	70.079	Dipodomys_ordii
ENSMAMG00000018428	sub1b	80	50.980	ENSEBUG00000008746	sub1a	53	50.000	Eptatretus_burgeri
ENSMAMG00000018428	sub1b	100	66.929	ENSEASG00005007099	SUB1	100	70.866	Equus_asinus_asinus
ENSMAMG00000018428	sub1b	100	66.929	ENSECAG00000012399	SUB1	100	70.866	Equus_caballus
ENSMAMG00000018428	sub1b	81	71.569	ENSEEUG00000000436	SUB1	99	71.569	Erinaceus_europaeus
ENSMAMG00000018428	sub1b	100	66.142	ENSFCAG00000037288	SUB1	100	70.079	Felis_catus
ENSMAMG00000018428	sub1b	100	72.222	ENSFALG00000002143	SUB1	87	73.016	Ficedula_albicollis
ENSMAMG00000018428	sub1b	100	66.929	ENSFDAG00000017179	SUB1	100	70.866	Fukomys_damarensis
ENSMAMG00000018428	sub1b	100	73.016	ENSGALG00000003248	SUB1	100	73.810	Gallus_gallus
ENSMAMG00000018428	sub1b	100	70.635	ENSGALG00000034905	-	100	71.429	Gallus_gallus
ENSMAMG00000018428	sub1b	100	45.238	ENSGALG00000027147	-	100	45.238	Gallus_gallus
ENSMAMG00000018428	sub1b	100	92.000	ENSGACG00000003912	sub1b	100	92.000	Gasterosteus_aculeatus
ENSMAMG00000018428	sub1b	100	73.016	ENSGAGG00000013535	SUB1	100	73.810	Gopherus_agassizii
ENSMAMG00000018428	sub1b	100	66.929	ENSGGOG00000040900	SUB1	100	70.866	Gorilla_gorilla
ENSMAMG00000018428	sub1b	99	82.258	ENSHBUG00000013953	sub1b	77	95.146	Haplochromis_burtoni
ENSMAMG00000018428	sub1b	100	66.929	ENSHGLG00000006749	SUB1	100	70.866	Heterocephalus_glaber_female
ENSMAMG00000018428	sub1b	100	66.929	ENSHGLG00100014344	SUB1	100	70.866	Heterocephalus_glaber_male
ENSMAMG00000018428	sub1b	100	88.800	ENSHCOG00000001809	sub1b	100	88.800	Hippocampus_comes
ENSMAMG00000018428	sub1b	100	77.344	ENSIPUG00000024367	SUB1	100	77.344	Ictalurus_punctatus
ENSMAMG00000018428	sub1b	100	80.800	ENSIPUG00000008166	sub1	100	80.800	Ictalurus_punctatus
ENSMAMG00000018428	sub1b	100	67.717	ENSSTOG00000019364	SUB1	100	71.654	Ictidomys_tridecemlineatus
ENSMAMG00000018428	sub1b	100	67.717	ENSJJAG00000018885	Sub1	100	70.079	Jaculus_jaculus
ENSMAMG00000018428	sub1b	99	88.710	ENSLBEG00000010728	sub1b	100	88.000	Labrus_bergylta
ENSMAMG00000018428	sub1b	52	83.077	ENSLACG00000001068	SUB1	100	83.077	Latimeria_chalumnae
ENSMAMG00000018428	sub1b	100	80.800	ENSLOCG00000006692	sub1b	100	80.800	Lepisosteus_oculatus
ENSMAMG00000018428	sub1b	100	69.291	ENSLAFG00000011006	-	100	71.654	Loxodonta_africana
ENSMAMG00000018428	sub1b	100	69.291	ENSLAFG00000032088	-	100	71.654	Loxodonta_africana
ENSMAMG00000018428	sub1b	100	59.055	ENSMFAG00000045643	-	61	59.843	Macaca_fascicularis
ENSMAMG00000018428	sub1b	100	66.929	ENSMFAG00000040728	SUB1	100	70.866	Macaca_fascicularis
ENSMAMG00000018428	sub1b	100	66.929	ENSMMUG00000046181	SUB1	100	70.866	Macaca_mulatta
ENSMAMG00000018428	sub1b	100	66.929	ENSMNEG00000037046	SUB1	100	70.866	Macaca_nemestrina
ENSMAMG00000018428	sub1b	100	65.354	ENSMLEG00000030509	-	94	68.504	Mandrillus_leucophaeus
ENSMAMG00000018428	sub1b	100	54.762	ENSMLEG00000043436	-	90	58.730	Mandrillus_leucophaeus
ENSMAMG00000018428	sub1b	100	66.929	ENSMLEG00000037017	-	100	70.866	Mandrillus_leucophaeus
ENSMAMG00000018428	sub1b	100	96.000	ENSMZEG00005021252	sub1b	100	96.000	Maylandia_zebra
ENSMAMG00000018428	sub1b	100	73.016	ENSMGAG00000002906	SUB1	100	73.810	Meleagris_gallopavo
ENSMAMG00000018428	sub1b	100	47.244	ENSMGAG00000001200	-	95	46.457	Meleagris_gallopavo
ENSMAMG00000018428	sub1b	100	65.354	ENSMAUG00000020232	Sub1	100	69.291	Mesocricetus_auratus
ENSMAMG00000018428	sub1b	100	66.929	ENSMICG00000014535	SUB1	100	70.866	Microcebus_murinus
ENSMAMG00000018428	sub1b	100	60.630	ENSMOCG00000016424	-	100	57.143	Microtus_ochrogaster
ENSMAMG00000018428	sub1b	100	65.354	ENSMOCG00000018930	-	100	69.291	Microtus_ochrogaster
ENSMAMG00000018428	sub1b	83	75.000	ENSMODG00000020410	SUB1	75	75.000	Monodelphis_domestica
ENSMAMG00000018428	sub1b	100	95.200	ENSMALG00000007163	sub1b	81	95.200	Monopterus_albus
ENSMAMG00000018428	sub1b	100	65.354	MGP_CAROLIEiJ_G0019676	Sub1	100	69.291	Mus_caroli
ENSMAMG00000018428	sub1b	100	65.354	ENSMUSG00000022205	Sub1	100	69.291	Mus_musculus
ENSMAMG00000018428	sub1b	100	64.567	MGP_PahariEiJ_G0016056	Sub1	100	68.504	Mus_pahari
ENSMAMG00000018428	sub1b	100	65.354	MGP_SPRETEiJ_G0020573	Sub1	100	69.291	Mus_spretus
ENSMAMG00000018428	sub1b	100	65.354	ENSMPUG00000018418	-	100	69.291	Mustela_putorius_furo
ENSMAMG00000018428	sub1b	100	66.142	ENSMPUG00000015185	-	100	70.079	Mustela_putorius_furo
ENSMAMG00000018428	sub1b	100	67.717	ENSMLUG00000013685	-	95	71.654	Myotis_lucifugus
ENSMAMG00000018428	sub1b	100	66.142	ENSMLUG00000009236	-	95	65.354	Myotis_lucifugus
ENSMAMG00000018428	sub1b	100	70.635	ENSNGAG00000010782	-	84	69.048	Nannospalax_galili
ENSMAMG00000018428	sub1b	100	66.142	ENSNGAG00000014072	-	100	70.079	Nannospalax_galili
ENSMAMG00000018428	sub1b	100	60.317	ENSNGAG00000017212	-	100	58.400	Nannospalax_galili
ENSMAMG00000018428	sub1b	83	93.269	ENSNBRG00000008451	sub1b	84	94.175	Neolamprologus_brichardi
ENSMAMG00000018428	sub1b	100	65.079	ENSNLEG00000035968	-	100	66.667	Nomascus_leucogenys
ENSMAMG00000018428	sub1b	100	67.717	ENSNLEG00000018383	-	95	72.441	Nomascus_leucogenys
ENSMAMG00000018428	sub1b	100	66.142	ENSNLEG00000036068	SUB1	100	70.079	Nomascus_leucogenys
ENSMAMG00000018428	sub1b	100	69.841	ENSMEUG00000007770	SUB1	100	73.810	Notamacropus_eugenii
ENSMAMG00000018428	sub1b	100	66.929	ENSOPRG00000012887	SUB1	100	71.654	Ochotona_princeps
ENSMAMG00000018428	sub1b	86	67.593	ENSODEG00000015114	-	87	67.593	Octodon_degus
ENSMAMG00000018428	sub1b	100	65.354	ENSODEG00000014558	-	72	69.444	Octodon_degus
ENSMAMG00000018428	sub1b	100	66.929	ENSODEG00000001937	-	100	70.866	Octodon_degus
ENSMAMG00000018428	sub1b	100	71.429	ENSOANG00000002328	SUB1	95	75.397	Ornithorhynchus_anatinus
ENSMAMG00000018428	sub1b	100	65.354	ENSOCUG00000006262	SUB1	60	66.929	Oryctolagus_cuniculus
ENSMAMG00000018428	sub1b	98	67.742	ENSOGAG00000000337	-	100	71.774	Otolemur_garnettii
ENSMAMG00000018428	sub1b	100	66.929	ENSOGAG00000009012	-	100	70.866	Otolemur_garnettii
ENSMAMG00000018428	sub1b	100	66.929	ENSOARG00000012154	SUB1	100	70.866	Ovis_aries
ENSMAMG00000018428	sub1b	100	66.929	ENSPPAG00000011212	SUB1	100	70.866	Pan_paniscus
ENSMAMG00000018428	sub1b	100	66.142	ENSPPRG00000008557	SUB1	100	70.079	Panthera_pardus
ENSMAMG00000018428	sub1b	100	66.142	ENSPTIG00000009466	SUB1	100	70.079	Panthera_tigris_altaica
ENSMAMG00000018428	sub1b	100	61.417	ENSPTRG00000041644	-	100	64.567	Pan_troglodytes
ENSMAMG00000018428	sub1b	100	66.929	ENSPTRG00000048895	SUB1	100	70.866	Pan_troglodytes
ENSMAMG00000018428	sub1b	100	66.929	ENSPANG00000000339	-	97	70.866	Papio_anubis
ENSMAMG00000018428	sub1b	100	65.354	ENSPANG00000000672	-	91	68.504	Papio_anubis
ENSMAMG00000018428	sub1b	100	67.460	ENSPANG00000035601	-	100	67.200	Papio_anubis
ENSMAMG00000018428	sub1b	100	66.929	ENSPANG00000002644	-	95	70.866	Papio_anubis
ENSMAMG00000018428	sub1b	100	58.730	ENSPANG00000033272	-	90	58.730	Papio_anubis
ENSMAMG00000018428	sub1b	100	80.000	ENSPKIG00000016923	sub1b	100	80.000	Paramormyrops_kingsleyae
ENSMAMG00000018428	sub1b	100	71.429	ENSPSIG00000005731	SUB1	95	72.222	Pelodiscus_sinensis
ENSMAMG00000018428	sub1b	100	69.841	ENSPCIG00000020907	-	100	73.810	Phascolarctos_cinereus
ENSMAMG00000018428	sub1b	100	67.460	ENSPCIG00000020827	-	100	67.460	Phascolarctos_cinereus
ENSMAMG00000018428	sub1b	100	66.929	ENSPPYG00000015379	SUB1	100	70.866	Pongo_abelii
ENSMAMG00000018428	sub1b	100	63.780	ENSPPYG00000018347	-	100	70.079	Pongo_abelii
ENSMAMG00000018428	sub1b	100	66.929	ENSPCOG00000014391	SUB1	100	70.866	Propithecus_coquereli
ENSMAMG00000018428	sub1b	100	66.142	ENSPVAG00000004785	SUB1	100	70.079	Pteropus_vampyrus
ENSMAMG00000018428	sub1b	100	96.000	ENSPNYG00000010975	sub1b	100	96.000	Pundamilia_nyererei
ENSMAMG00000018428	sub1b	99	83.065	ENSPNAG00000005998	sub1b	99	83.065	Pygocentrus_nattereri
ENSMAMG00000018428	sub1b	100	70.635	ENSPNAG00000008693	sub1a	100	76.984	Pygocentrus_nattereri
ENSMAMG00000018428	sub1b	100	66.142	ENSRNOG00000050563	Sub1	100	70.079	Rattus_norvegicus
ENSMAMG00000018428	sub1b	100	64.286	ENSRBIG00000031233	SUB1	100	67.460	Rhinopithecus_bieti
ENSMAMG00000018428	sub1b	100	62.698	ENSRROG00000042718	-	90	66.667	Rhinopithecus_roxellana
ENSMAMG00000018428	sub1b	100	66.929	ENSRROG00000040438	SUB1	100	70.866	Rhinopithecus_roxellana
ENSMAMG00000018428	sub1b	100	66.929	ENSSBOG00000026994	SUB1	100	70.866	Saimiri_boliviensis_boliviensis
ENSMAMG00000018428	sub1b	100	69.841	ENSSHAG00000014986	SUB1	100	73.810	Sarcophilus_harrisii
ENSMAMG00000018428	sub1b	100	77.165	ENSSFOG00015018386	sub1b	100	77.165	Scleropages_formosus
ENSMAMG00000018428	sub1b	100	79.200	ENSSFOG00015017283	sub1b	100	79.200	Scleropages_formosus
ENSMAMG00000018428	sub1b	100	93.600	ENSSMAG00000000313	sub1b	100	93.600	Scophthalmus_maximus
ENSMAMG00000018428	sub1b	100	96.800	ENSSDUG00000013854	sub1b	76	96.800	Seriola_dumerili
ENSMAMG00000018428	sub1b	100	96.800	ENSSLDG00000000852	sub1b	100	96.800	Seriola_lalandi_dorsalis
ENSMAMG00000018428	sub1b	100	71.429	ENSSPUG00000016817	SUB1	100	72.222	Sphenodon_punctatus
ENSMAMG00000018428	sub1b	100	95.200	ENSSPAG00000019363	sub1b	100	95.200	Stegastes_partitus
ENSMAMG00000018428	sub1b	100	66.929	ENSSSCG00000040294	-	87	70.866	Sus_scrofa
ENSMAMG00000018428	sub1b	100	66.929	ENSSSCG00000032650	-	100	70.866	Sus_scrofa
ENSMAMG00000018428	sub1b	100	71.429	ENSTGUG00000001918	SUB1	100	72.222	Taeniopygia_guttata
ENSMAMG00000018428	sub1b	100	90.400	ENSTRUG00000024420	sub1b	100	90.400	Takifugu_rubripes
ENSMAMG00000018428	sub1b	100	88.000	ENSTNIG00000002700	sub1b	100	88.000	Tetraodon_nigroviridis
ENSMAMG00000018428	sub1b	100	66.142	ENSTBEG00000004053	-	100	70.079	Tupaia_belangeri
ENSMAMG00000018428	sub1b	100	66.142	ENSTBEG00000006504	-	100	70.079	Tupaia_belangeri
ENSMAMG00000018428	sub1b	99	61.905	ENSTBEG00000015821	-	100	65.873	Tupaia_belangeri
ENSMAMG00000018428	sub1b	100	68.504	ENSTBEG00000012861	-	100	66.142	Tupaia_belangeri
ENSMAMG00000018428	sub1b	100	66.142	ENSTBEG00000001790	-	100	65.354	Tupaia_belangeri
ENSMAMG00000018428	sub1b	100	69.291	ENSTBEG00000011247	-	84	68.519	Tupaia_belangeri
ENSMAMG00000018428	sub1b	81	71.569	ENSTTRG00000017324	SUB1	99	71.569	Tursiops_truncatus
ENSMAMG00000018428	sub1b	100	66.142	ENSUAMG00000000182	SUB1	100	70.079	Ursus_americanus
ENSMAMG00000018428	sub1b	100	66.142	ENSUMAG00000013792	SUB1	100	70.079	Ursus_maritimus
ENSMAMG00000018428	sub1b	100	62.698	ENSVPAG00000011012	SUB1	100	66.667	Vicugna_pacos
ENSMAMG00000018428	sub1b	89	61.947	ENSVVUG00000025193	-	95	66.372	Vulpes_vulpes
ENSMAMG00000018428	sub1b	100	66.142	ENSVVUG00000022166	-	100	70.079	Vulpes_vulpes
ENSMAMG00000018428	sub1b	100	67.188	ENSXETG00000027218	sub1	100	71.094	Xenopus_tropicalis