EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000018529 (Gene tree)
Gene ID: 113124578
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 3573 bases
Position: chrOOHQ01000096.1:16365690-16369262
Accession: 113124578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000027541	MRP-S27	PF10037.9	4.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000028254	-	1998	XM_026297571	ENSMAMP00000027541	381 (aa)	XP_026153356	-

Gene Model

Click here to download ENSMAMG00000018529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000018529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000018529	ptcd2	91	47.989	ENSG00000049883	PTCD2	100	42.857	Homo_sapiens
ENSMAMG00000018529	ptcd2	100	74.278	ENSAPOG00000020682	ptcd2	100	74.278	Acanthochromis_polyacanthus
ENSMAMG00000018529	ptcd2	91	46.839	ENSAMEG00000007194	PTCD2	90	46.839	Ailuropoda_melanoleuca
ENSMAMG00000018529	ptcd2	90	70.977	ENSACIG00000002053	ptcd2	100	70.977	Amphilophus_citrinellus
ENSMAMG00000018529	ptcd2	100	74.278	ENSAOCG00000006616	ptcd2	98	74.278	Amphiprion_ocellaris
ENSMAMG00000018529	ptcd2	100	74.278	ENSAPEG00000022926	ptcd2	98	74.278	Amphiprion_percula
ENSMAMG00000018529	ptcd2	94	50.278	ENSACAG00000009747	PTCD2	92	50.278	Anolis_carolinensis
ENSMAMG00000018529	ptcd2	96	46.684	ENSANAG00000029353	PTCD2	97	46.684	Aotus_nancymaae
ENSMAMG00000018529	ptcd2	100	78.478	ENSACLG00000027742	ptcd2	98	78.478	Astatotilapia_calliptera
ENSMAMG00000018529	ptcd2	100	50.392	ENSAMXG00000029404	ptcd2	100	50.392	Astyanax_mexicanus
ENSMAMG00000018529	ptcd2	94	47.011	ENSBTAG00000014675	PTCD2	96	47.011	Bos_taurus
ENSMAMG00000018529	ptcd2	96	45.358	ENSCJAG00000016364	PTCD2	97	45.358	Callithrix_jacchus
ENSMAMG00000018529	ptcd2	94	47.814	ENSCAFG00000007982	PTCD2	86	47.814	Canis_familiaris
ENSMAMG00000018529	ptcd2	91	48.266	ENSCAFG00020019147	PTCD2	97	48.266	Canis_lupus_dingo
ENSMAMG00000018529	ptcd2	94	46.739	ENSCHIG00000017118	PTCD2	96	46.739	Capra_hircus
ENSMAMG00000018529	ptcd2	94	45.699	ENSCPOG00000040168	PTCD2	97	45.699	Cavia_porcellus
ENSMAMG00000018529	ptcd2	72	49.817	ENSCCAG00000021996	-	84	49.817	Cebus_capucinus
ENSMAMG00000018529	ptcd2	91	47.989	ENSCCAG00000029389	-	90	47.989	Cebus_capucinus
ENSMAMG00000018529	ptcd2	97	48.128	ENSCATG00000019069	PTCD2	98	48.128	Cercocebus_atys
ENSMAMG00000018529	ptcd2	91	48.276	ENSCLAG00000000072	PTCD2	91	48.276	Chinchilla_lanigera
ENSMAMG00000018529	ptcd2	91	49.138	ENSCSAG00000015623	PTCD2	98	47.594	Chlorocebus_sabaeus
ENSMAMG00000018529	ptcd2	70	52.353	ENSCHOG00000010634	PTCD2	77	52.353	Choloepus_hoffmanni
ENSMAMG00000018529	ptcd2	97	48.387	ENSCPBG00000000216	PTCD2	95	48.387	Chrysemys_picta_bellii
ENSMAMG00000018529	ptcd2	97	48.267	ENSCANG00000035636	PTCD2	96	48.267	Colobus_angolensis_palliatus
ENSMAMG00000018529	ptcd2	91	49.425	ENSCGRG00001015289	Ptcd2	76	49.425	Cricetulus_griseus_chok1gshd
ENSMAMG00000018529	ptcd2	91	49.425	ENSCGRG00000006193	Ptcd2	76	49.425	Cricetulus_griseus_crigri
ENSMAMG00000018529	ptcd2	98	73.797	ENSCVAG00000001285	ptcd2	96	73.797	Cyprinodon_variegatus
ENSMAMG00000018529	ptcd2	100	52.219	ENSDARG00000035391	ptcd2	100	52.219	Danio_rerio
ENSMAMG00000018529	ptcd2	95	47.425	ENSDNOG00000008719	PTCD2	96	47.425	Dasypus_novemcinctus
ENSMAMG00000018529	ptcd2	97	47.090	ENSDORG00000004921	Ptcd2	98	47.090	Dipodomys_ordii
ENSMAMG00000018529	ptcd2	91	46.705	ENSETEG00000016542	PTCD2	90	46.705	Echinops_telfairi
ENSMAMG00000018529	ptcd2	96	46.543	ENSEASG00005018038	PTCD2	98	46.543	Equus_asinus_asinus
ENSMAMG00000018529	ptcd2	99	46.438	ENSECAG00000007022	PTCD2	97	46.438	Equus_caballus
ENSMAMG00000018529	ptcd2	95	47.934	ENSEEUG00000014031	PTCD2	93	47.934	Erinaceus_europaeus
ENSMAMG00000018529	ptcd2	100	60.574	ENSELUG00000003584	ptcd2	100	60.574	Esox_lucius
ENSMAMG00000018529	ptcd2	82	48.571	ENSFCAG00000045432	PTCD2	74	48.571	Felis_catus
ENSMAMG00000018529	ptcd2	86	44.954	ENSFALG00000010299	PTCD2	99	44.954	Ficedula_albicollis
ENSMAMG00000018529	ptcd2	96	45.946	ENSFDAG00000018461	PTCD2	97	45.946	Fukomys_damarensis
ENSMAMG00000018529	ptcd2	99	63.969	ENSGMOG00000003637	ptcd2	99	63.969	Gadus_morhua
ENSMAMG00000018529	ptcd2	91	46.398	ENSGALG00000038260	PTCD2	91	46.398	Gallus_gallus
ENSMAMG00000018529	ptcd2	97	50.802	ENSGAGG00000021952	PTCD2	95	50.802	Gopherus_agassizii
ENSMAMG00000018529	ptcd2	91	47.989	ENSGGOG00000010695	PTCD2	90	47.989	Gorilla_gorilla
ENSMAMG00000018529	ptcd2	100	77.690	ENSHBUG00000009191	ptcd2	98	77.690	Haplochromis_burtoni
ENSMAMG00000018529	ptcd2	97	46.966	ENSHGLG00000001234	PTCD2	99	46.966	Heterocephalus_glaber_female
ENSMAMG00000018529	ptcd2	97	46.966	ENSHGLG00100015419	PTCD2	99	46.966	Heterocephalus_glaber_male
ENSMAMG00000018529	ptcd2	100	66.234	ENSHCOG00000001703	ptcd2	100	66.234	Hippocampus_comes
ENSMAMG00000018529	ptcd2	86	56.881	ENSIPUG00000006080	ptcd2	90	57.143	Ictalurus_punctatus
ENSMAMG00000018529	ptcd2	97	47.453	ENSSTOG00000006596	PTCD2	97	47.453	Ictidomys_tridecemlineatus
ENSMAMG00000018529	ptcd2	91	49.713	ENSJJAG00000024388	Ptcd2	91	49.713	Jaculus_jaculus
ENSMAMG00000018529	ptcd2	99	62.565	ENSKMAG00000009329	ptcd2	99	62.565	Kryptolebias_marmoratus
ENSMAMG00000018529	ptcd2	100	71.129	ENSLBEG00000024871	ptcd2	98	71.129	Labrus_bergylta
ENSMAMG00000018529	ptcd2	100	55.729	ENSLOCG00000011122	ptcd2	100	55.729	Lepisosteus_oculatus
ENSMAMG00000018529	ptcd2	72	54.182	ENSLAFG00000004115	PTCD2	93	52.941	Loxodonta_africana
ENSMAMG00000018529	ptcd2	97	48.533	ENSMFAG00000031516	PTCD2	96	48.533	Macaca_fascicularis
ENSMAMG00000018529	ptcd2	97	48.000	ENSMNEG00000007537	PTCD2	98	48.000	Macaca_nemestrina
ENSMAMG00000018529	ptcd2	97	48.267	ENSMLEG00000031093	PTCD2	96	48.267	Mandrillus_leucophaeus
ENSMAMG00000018529	ptcd2	100	78.478	ENSMZEG00005003625	ptcd2	98	78.478	Maylandia_zebra
ENSMAMG00000018529	ptcd2	91	47.126	ENSMGAG00000005033	PTCD2	100	47.126	Meleagris_gallopavo
ENSMAMG00000018529	ptcd2	94	47.881	ENSMAUG00000020253	Ptcd2	95	39.452	Mesocricetus_auratus
ENSMAMG00000018529	ptcd2	94	48.087	ENSMICG00000004535	PTCD2	94	48.087	Microcebus_murinus
ENSMAMG00000018529	ptcd2	94	47.945	ENSMOCG00000019985	Ptcd2	96	47.945	Microtus_ochrogaster
ENSMAMG00000018529	ptcd2	97	47.425	ENSMODG00000001695	PTCD2	96	47.425	Monodelphis_domestica
ENSMAMG00000018529	ptcd2	100	79.003	ENSMALG00000022372	ptcd2	100	79.003	Monopterus_albus
ENSMAMG00000018529	ptcd2	94	46.301	MGP_CAROLIEiJ_G0018829	Ptcd2	96	46.301	Mus_caroli
ENSMAMG00000018529	ptcd2	94	46.027	ENSMUSG00000021650	Ptcd2	96	46.027	Mus_musculus
ENSMAMG00000018529	ptcd2	94	47.397	MGP_PahariEiJ_G0015904	Ptcd2	96	47.397	Mus_pahari
ENSMAMG00000018529	ptcd2	94	46.575	MGP_SPRETEiJ_G0019711	Ptcd2	96	46.575	Mus_spretus
ENSMAMG00000018529	ptcd2	91	47.414	ENSMPUG00000014401	PTCD2	91	47.414	Mustela_putorius_furo
ENSMAMG00000018529	ptcd2	91	47.564	ENSMLUG00000007374	PTCD2	90	47.564	Myotis_lucifugus
ENSMAMG00000018529	ptcd2	97	45.989	ENSNGAG00000005027	Ptcd2	97	45.989	Nannospalax_galili
ENSMAMG00000018529	ptcd2	100	77.953	ENSNBRG00000008174	ptcd2	100	77.953	Neolamprologus_brichardi
ENSMAMG00000018529	ptcd2	86	74.772	ENSNBRG00000000092	-	100	74.772	Neolamprologus_brichardi
ENSMAMG00000018529	ptcd2	91	47.414	ENSNLEG00000004516	PTCD2	90	47.414	Nomascus_leucogenys
ENSMAMG00000018529	ptcd2	63	57.955	ENSMEUG00000014012	-	63	57.955	Notamacropus_eugenii
ENSMAMG00000018529	ptcd2	94	47.945	ENSOPRG00000007290	PTCD2	94	47.945	Ochotona_princeps
ENSMAMG00000018529	ptcd2	94	47.826	ENSODEG00000016417	PTCD2	96	47.826	Octodon_degus
ENSMAMG00000018529	ptcd2	86	78.287	ENSONIG00000011269	ptcd2	96	78.287	Oreochromis_niloticus
ENSMAMG00000018529	ptcd2	91	49.425	ENSOCUG00000007970	PTCD2	91	49.425	Oryctolagus_cuniculus
ENSMAMG00000018529	ptcd2	98	71.733	ENSORLG00000003851	ptcd2	96	71.733	Oryzias_latipes
ENSMAMG00000018529	ptcd2	98	70.667	ENSORLG00020009823	ptcd2	98	70.667	Oryzias_latipes_hni
ENSMAMG00000018529	ptcd2	91	70.435	ENSORLG00015016777	ptcd2	99	70.435	Oryzias_latipes_hsok
ENSMAMG00000018529	ptcd2	98	72.000	ENSOMEG00000012396	ptcd2	91	72.000	Oryzias_melastigma
ENSMAMG00000018529	ptcd2	91	49.425	ENSOGAG00000008390	PTCD2	90	49.425	Otolemur_garnettii
ENSMAMG00000018529	ptcd2	94	47.011	ENSOARG00000005087	PTCD2	95	47.011	Ovis_aries
ENSMAMG00000018529	ptcd2	91	47.989	ENSPPAG00000028480	PTCD2	90	47.989	Pan_paniscus
ENSMAMG00000018529	ptcd2	97	46.649	ENSPTRG00000016968	PTCD2	94	46.649	Pan_troglodytes
ENSMAMG00000018529	ptcd2	90	48.986	ENSPANG00000006611	PTCD2	89	48.986	Papio_anubis
ENSMAMG00000018529	ptcd2	100	53.125	ENSPKIG00000019896	ptcd2	100	53.125	Paramormyrops_kingsleyae
ENSMAMG00000018529	ptcd2	82	50.962	ENSPSIG00000014559	PTCD2	97	50.962	Pelodiscus_sinensis
ENSMAMG00000018529	ptcd2	94	49.319	ENSPEMG00000000884	Ptcd2	96	49.319	Peromyscus_maniculatus_bairdii
ENSMAMG00000018529	ptcd2	97	47.733	ENSPCIG00000029047	PTCD2	98	47.733	Phascolarctos_cinereus
ENSMAMG00000018529	ptcd2	98	70.822	ENSPLAG00000010456	ptcd2	98	70.822	Poecilia_latipinna
ENSMAMG00000018529	ptcd2	98	71.733	ENSPREG00000021797	ptcd2	96	71.733	Poecilia_reticulata
ENSMAMG00000018529	ptcd2	91	41.954	ENSPPYG00000015543	PTCD2	88	41.954	Pongo_abelii
ENSMAMG00000018529	ptcd2	72	45.255	ENSPCAG00000006806	PTCD2	87	45.255	Procavia_capensis
ENSMAMG00000018529	ptcd2	92	49.003	ENSPVAG00000010935	PTCD2	90	49.003	Pteropus_vampyrus
ENSMAMG00000018529	ptcd2	100	78.215	ENSPNYG00000003122	ptcd2	98	78.215	Pundamilia_nyererei
ENSMAMG00000018529	ptcd2	100	60.938	ENSPNAG00000021490	ptcd2	100	60.938	Pygocentrus_nattereri
ENSMAMG00000018529	ptcd2	94	47.397	ENSRNOG00000028403	Ptcd2	96	47.397	Rattus_norvegicus
ENSMAMG00000018529	ptcd2	91	43.678	ENSRBIG00000032929	PTCD2	89	43.678	Rhinopithecus_bieti
ENSMAMG00000018529	ptcd2	97	47.467	ENSRROG00000000080	PTCD2	98	47.467	Rhinopithecus_roxellana
ENSMAMG00000018529	ptcd2	91	47.126	ENSSBOG00000018911	PTCD2	91	47.126	Saimiri_boliviensis_boliviensis
ENSMAMG00000018529	ptcd2	97	45.528	ENSSHAG00000003833	PTCD2	95	45.528	Sarcophilus_harrisii
ENSMAMG00000018529	ptcd2	100	53.906	ENSSFOG00015015415	ptcd2	100	53.906	Scleropages_formosus
ENSMAMG00000018529	ptcd2	100	65.903	ENSSMAG00000010350	ptcd2	100	65.903	Scophthalmus_maximus
ENSMAMG00000018529	ptcd2	100	79.003	ENSSDUG00000008142	ptcd2	95	79.003	Seriola_dumerili
ENSMAMG00000018529	ptcd2	100	79.003	ENSSLDG00000015284	ptcd2	100	79.003	Seriola_lalandi_dorsalis
ENSMAMG00000018529	ptcd2	72	44.161	ENSSARG00000004983	PTCD2	87	44.161	Sorex_araneus
ENSMAMG00000018529	ptcd2	100	46.354	ENSSPUG00000000176	PTCD2	96	46.354	Sphenodon_punctatus
ENSMAMG00000018529	ptcd2	100	68.241	ENSSPAG00000008591	ptcd2	98	68.241	Stegastes_partitus
ENSMAMG00000018529	ptcd2	93	47.253	ENSSSCG00000016975	PTCD2	86	47.253	Sus_scrofa
ENSMAMG00000018529	ptcd2	90	47.536	ENSTGUG00000005705	PTCD2	99	47.536	Taeniopygia_guttata
ENSMAMG00000018529	ptcd2	91	45.977	ENSTBEG00000016559	PTCD2	90	45.977	Tupaia_belangeri
ENSMAMG00000018529	ptcd2	94	48.611	ENSTTRG00000011851	PTCD2	93	48.611	Tursiops_truncatus
ENSMAMG00000018529	ptcd2	91	46.839	ENSUAMG00000007583	PTCD2	81	46.839	Ursus_americanus
ENSMAMG00000018529	ptcd2	97	45.430	ENSUMAG00000007666	PTCD2	97	45.430	Ursus_maritimus
ENSMAMG00000018529	ptcd2	91	46.552	ENSVPAG00000009597	PTCD2	89	46.552	Vicugna_pacos
ENSMAMG00000018529	ptcd2	91	47.989	ENSVVUG00000007299	-	96	47.268	Vulpes_vulpes
ENSMAMG00000018529	ptcd2	91	50.000	ENSXETG00000031652	PTCD2	91	50.000	Xenopus_tropicalis
ENSMAMG00000018529	ptcd2	98	70.027	ENSXMAG00000005940	ptcd2	89	70.027	Xiphophorus_maculatus