EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000018536 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 4097 bases
Position: chrOOHQ01000089.1:19834420-19838516
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000027553	zf-C2H2	PF00096.26	4.3e-30	1	5
ENSMAMP00000027553	zf-C2H2	PF00096.26	4.3e-30	2	5
ENSMAMP00000027553	zf-C2H2	PF00096.26	4.3e-30	3	5
ENSMAMP00000027553	zf-C2H2	PF00096.26	4.3e-30	4	5
ENSMAMP00000027553	zf-C2H2	PF00096.26	4.3e-30	5	5
ENSMAMP00000027561	zf-C2H2	PF00096.26	4.3e-30	1	5
ENSMAMP00000027561	zf-C2H2	PF00096.26	4.3e-30	2	5
ENSMAMP00000027561	zf-C2H2	PF00096.26	4.3e-30	3	5
ENSMAMP00000027561	zf-C2H2	PF00096.26	4.3e-30	4	5
ENSMAMP00000027561	zf-C2H2	PF00096.26	4.3e-30	5	5
ENSMAMP00000027553	zf-met	PF12874.7	3.5e-12	1	1
ENSMAMP00000027561	zf-met	PF12874.7	3.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000028266	-	2957	-	ENSMAMP00000027553	635 (aa)	-	-
ENSMAMT00000028274	-	2871	-	ENSMAMP00000027561	635 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000018536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000018536's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000018536	-	63	35.043	ENSMAMG00000003040	gfi1b	60	34.783
ENSMAMG00000018536	-	71	34.078	ENSMAMG00000018114	-	85	34.252
ENSMAMG00000018536	-	72	30.530	ENSMAMG00000017946	-	81	31.206
ENSMAMG00000018536	-	67	30.058	ENSMAMG00000022206	-	77	30.058
ENSMAMG00000018536	-	62	36.957	ENSMAMG00000008125	gfi1ab	50	36.957
ENSMAMG00000018536	-	62	33.509	ENSMAMG00000015087	znf319b	93	32.212
ENSMAMG00000018536	-	61	34.043	ENSMAMG00000018743	-	75	34.043
ENSMAMG00000018536	-	64	36.047	ENSMAMG00000015632	snai2	59	33.600
ENSMAMG00000018536	-	62	32.000	ENSMAMG00000022145	-	65	31.193
ENSMAMG00000018536	-	73	37.681	ENSMAMG00000022147	-	69	37.681
ENSMAMG00000018536	-	62	31.111	ENSMAMG00000013419	prdm5	79	30.128
ENSMAMG00000018536	-	61	40.708	ENSMAMG00000010902	-	59	40.708
ENSMAMG00000018536	-	69	36.306	ENSMAMG00000014758	-	87	34.222
ENSMAMG00000018536	-	71	33.628	ENSMAMG00000017939	-	84	33.628
ENSMAMG00000018536	-	72	34.211	ENSMAMG00000016087	-	84	38.251
ENSMAMG00000018536	-	61	32.642	ENSMAMG00000002731	znf1056	88	31.765
ENSMAMG00000018536	-	66	35.294	ENSMAMG00000002083	-	96	35.294
ENSMAMG00000018536	-	55	30.588	ENSMAMG00000009768	ovol1a	53	30.588
ENSMAMG00000018536	-	63	37.879	ENSMAMG00000019385	-	59	37.879
ENSMAMG00000018536	-	67	31.250	ENSMAMG00000023622	-	56	31.250
ENSMAMG00000018536	-	65	32.800	ENSMAMG00000019301	-	93	32.806
ENSMAMG00000018536	-	71	31.844	ENSMAMG00000015670	-	69	31.844
ENSMAMG00000018536	-	67	33.333	ENSMAMG00000009313	znf646	69	33.333
ENSMAMG00000018536	-	61	32.836	ENSMAMG00000023652	patz1	56	32.836
ENSMAMG00000018536	-	63	31.464	ENSMAMG00000016484	-	93	35.294
ENSMAMG00000018536	-	71	39.167	ENSMAMG00000018071	-	51	39.167
ENSMAMG00000018536	-	67	32.026	ENSMAMG00000014734	-	54	32.026
ENSMAMG00000018536	-	72	33.149	ENSMAMG00000016542	-	67	38.636
ENSMAMG00000018536	-	73	35.965	ENSMAMG00000022154	-	54	34.737
ENSMAMG00000018536	-	77	33.636	ENSMAMG00000022152	-	51	34.091
ENSMAMG00000018536	-	62	35.000	ENSMAMG00000022150	-	54	35.000
ENSMAMG00000018536	-	62	35.443	ENSMAMG00000023490	-	50	35.897
ENSMAMG00000018536	-	61	31.105	ENSMAMG00000017911	ZNF319	88	31.135
ENSMAMG00000018536	-	64	37.736	ENSMAMG00000001157	znf236	66	36.585
ENSMAMG00000018536	-	69	33.099	ENSMAMG00000013025	-	51	33.099
ENSMAMG00000018536	-	64	45.652	ENSMAMG00000022502	-	93	40.351
ENSMAMG00000018536	-	72	34.722	ENSMAMG00000016119	-	89	38.710
ENSMAMG00000018536	-	60	32.075	ENSMAMG00000011698	scrt1b	71	31.496
ENSMAMG00000018536	-	63	34.783	ENSMAMG00000000789	-	72	34.783
ENSMAMG00000018536	-	68	30.178	ENSMAMG00000009051	-	93	33.190
ENSMAMG00000018536	-	62	31.250	ENSMAMG00000009817	-	61	40.580
ENSMAMG00000018536	-	64	31.977	ENSMAMG00000007352	-	95	31.977
ENSMAMG00000018536	-	64	40.541	ENSMAMG00000006312	-	95	34.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000018536	-	98	71.672	ENSAPOG00000001097	-	97	72.727	Acanthochromis_polyacanthus
ENSMAMG00000018536	-	99	73.511	ENSATEG00000014755	-	97	73.906	Anabas_testudineus
ENSMAMG00000018536	-	66	33.990	ENSCSAG00000001938	ZNF845	82	35.142	Chlorocebus_sabaeus
ENSMAMG00000018536	-	66	33.333	ENSCSAVG00000007589	-	100	35.000	Ciona_savignyi
ENSMAMG00000018536	-	75	36.290	ENSCSAVG00000001989	-	100	35.789	Ciona_savignyi
ENSMAMG00000018536	-	66	33.799	ENSCANG00000038794	ZNF845	84	35.142	Colobus_angolensis_palliatus
ENSMAMG00000018536	-	61	32.258	ENSCGRG00001024630	-	76	32.075	Cricetulus_griseus_chok1gshd
ENSMAMG00000018536	-	61	33.504	ENSEBUG00000008988	ZNF845	84	33.504	Eptatretus_burgeri
ENSMAMG00000018536	-	61	32.765	ENSEBUG00000008852	ZNF845	73	31.429	Eptatretus_burgeri
ENSMAMG00000018536	-	63	33.249	ENSEBUG00000012628	ZNF845	82	31.316	Eptatretus_burgeri
ENSMAMG00000018536	-	62	36.923	ENSEBUG00000007308	ZNF845	91	36.923	Eptatretus_burgeri
ENSMAMG00000018536	-	69	68.258	ENSFHEG00000004454	-	97	68.258	Fundulus_heteroclitus
ENSMAMG00000018536	-	98	72.038	ENSHBUG00000009720	-	97	71.880	Haplochromis_burtoni
ENSMAMG00000018536	-	63	34.596	ENSMLEG00000044333	ZNF845	80	35.142	Mandrillus_leucophaeus
ENSMAMG00000018536	-	98	72.354	ENSMZEG00005020085	-	97	72.196	Maylandia_zebra
ENSMAMG00000018536	-	64	32.500	ENSMAUG00000014247	-	87	32.500	Mesocricetus_auratus
ENSMAMG00000018536	-	65	32.552	ENSMOCG00000002167	Zfp712	86	32.552	Microtus_ochrogaster
ENSMAMG00000018536	-	99	74.495	ENSMALG00000013321	-	97	75.078	Monopterus_albus
ENSMAMG00000018536	-	69	30.479	MGP_CAROLIEiJ_G0018661	Zfp759	89	31.188	Mus_caroli
ENSMAMG00000018536	-	69	30.769	ENSMUSG00000057396	Zfp759	89	31.436	Mus_musculus
ENSMAMG00000018536	-	64	31.395	ENSMUSG00000095432	Zfp748	92	32.432	Mus_musculus
ENSMAMG00000018536	-	65	35.294	MGP_PahariEiJ_G0015741	Zfp759	91	31.436	Mus_pahari
ENSMAMG00000018536	-	64	31.579	MGP_PahariEiJ_G0015756	Zfp748	92	31.579	Mus_pahari
ENSMAMG00000018536	-	65	30.749	MGP_SPRETEiJ_G0019544	Zfp759	86	31.188	Mus_spretus
ENSMAMG00000018536	-	64	31.316	MGP_SPRETEiJ_G0019560	Zfp748	92	32.432	Mus_spretus
ENSMAMG00000018536	-	66	34.236	ENSNLEG00000006172	ZNF845	81	34.596	Nomascus_leucogenys
ENSMAMG00000018536	-	96	62.783	ENSORLG00000028851	-	96	62.460	Oryzias_latipes
ENSMAMG00000018536	-	67	74.824	ENSOMEG00000010300	-	90	74.824	Oryzias_melastigma
ENSMAMG00000018536	-	62	34.158	ENSOGAG00000029343	-	76	34.026	Otolemur_garnettii
ENSMAMG00000018536	-	63	34.091	ENSPTRG00000050668	ZNF845	83	37.097	Pan_troglodytes
ENSMAMG00000018536	-	63	32.800	ENSPEMG00000020934	-	84	31.398	Peromyscus_maniculatus_bairdii
ENSMAMG00000018536	-	63	33.333	ENSPEMG00000021548	Zfp712	89	33.333	Peromyscus_maniculatus_bairdii
ENSMAMG00000018536	-	97	63.566	ENSPFOG00000010474	-	99	71.519	Poecilia_formosa
ENSMAMG00000018536	-	97	63.793	ENSPLAG00000017843	-	98	71.519	Poecilia_latipinna
ENSMAMG00000018536	-	97	64.163	ENSPMEG00000017809	-	97	64.632	Poecilia_mexicana
ENSMAMG00000018536	-	98	71.722	ENSPNYG00000021795	-	97	71.090	Pundamilia_nyererei
ENSMAMG00000018536	-	69	31.959	ENSRNOG00000049259	LOC102549842	95	32.573	Rattus_norvegicus
ENSMAMG00000018536	-	64	32.243	ENSRBIG00000035402	-	78	33.088	Rhinopithecus_bieti
ENSMAMG00000018536	-	61	34.961	ENSSBOG00000028573	-	82	34.961	Saimiri_boliviensis_boliviensis
ENSMAMG00000018536	-	99	75.038	ENSSDUG00000010305	-	97	75.804	Seriola_dumerili
ENSMAMG00000018536	-	98	71.963	ENSSPAG00000010470	-	96	72.231	Stegastes_partitus