EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000018673 (Gene tree)
Gene ID: 113136166
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein 48 (U11/U12)
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 5820 bases
Position: chrOOHQ01000011.1:11989529-11995348
Accession: ZDB-GENE-030131-4482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000027763	zf-U11-48K	PF05253.12	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000028478	-	2300	-	ENSMAMP00000027763	382 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000018673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000018673's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000018673	snrnp48	71	47.670	ENSG00000168566	SNRNP48	76	47.529	Homo_sapiens
ENSMAMG00000018673	snrnp48	83	76.708	ENSAPOG00000021430	snrnp48	95	77.019	Acanthochromis_polyacanthus
ENSMAMG00000018673	snrnp48	83	43.988	ENSAMEG00000017349	SNRNP48	74	47.104	Ailuropoda_melanoleuca
ENSMAMG00000018673	snrnp48	82	71.246	ENSACIG00000002032	snrnp48	95	71.384	Amphilophus_citrinellus
ENSMAMG00000018673	snrnp48	83	77.329	ENSAOCG00000010562	snrnp48	95	77.329	Amphiprion_ocellaris
ENSMAMG00000018673	snrnp48	83	77.500	ENSAPEG00000003231	snrnp48	95	77.500	Amphiprion_percula
ENSMAMG00000018673	snrnp48	80	80.386	ENSATEG00000020210	snrnp48	93	80.707	Anabas_testudineus
ENSMAMG00000018673	snrnp48	71	50.173	ENSACAG00000002811	SNRNP48	65	53.081	Anolis_carolinensis
ENSMAMG00000018673	snrnp48	71	48.029	ENSANAG00000033538	SNRNP48	76	47.909	Aotus_nancymaae
ENSMAMG00000018673	snrnp48	82	58.514	ENSAMXG00000015309	snrnp48	97	57.895	Astyanax_mexicanus
ENSMAMG00000018673	snrnp48	80	42.515	ENSBTAG00000001123	SNRNP48	77	47.037	Bos_taurus
ENSMAMG00000018673	snrnp48	72	47.518	ENSCJAG00000021330	SNRNP48	76	47.727	Callithrix_jacchus
ENSMAMG00000018673	snrnp48	82	44.379	ENSCAFG00000009574	SNRNP48	63	47.674	Canis_familiaris
ENSMAMG00000018673	snrnp48	83	44.118	ENSCAFG00020013203	SNRNP48	76	47.308	Canis_lupus_dingo
ENSMAMG00000018673	snrnp48	80	42.814	ENSCHIG00000015216	SNRNP48	75	48.092	Capra_hircus
ENSMAMG00000018673	snrnp48	71	48.029	ENSTSYG00000000698	SNRNP48	75	48.638	Carlito_syrichta
ENSMAMG00000018673	snrnp48	71	44.369	ENSCAPG00000006768	SNRNP48	90	42.806	Cavia_aperea
ENSMAMG00000018673	snrnp48	82	42.522	ENSCPOG00000007910	SNRNP48	96	40.785	Cavia_porcellus
ENSMAMG00000018673	snrnp48	71	47.331	ENSCCAG00000035652	SNRNP48	76	47.909	Cebus_capucinus
ENSMAMG00000018673	snrnp48	83	43.824	ENSCATG00000033947	SNRNP48	76	47.308	Cercocebus_atys
ENSMAMG00000018673	snrnp48	71	47.331	ENSCLAG00000003765	SNRNP48	76	47.909	Chinchilla_lanigera
ENSMAMG00000018673	snrnp48	71	47.687	ENSCSAG00000007409	SNRNP48	76	48.077	Chlorocebus_sabaeus
ENSMAMG00000018673	snrnp48	71	47.959	ENSCPBG00000019146	SNRNP48	64	54.412	Chrysemys_picta_bellii
ENSMAMG00000018673	snrnp48	71	48.029	ENSCANG00000030017	SNRNP48	76	48.077	Colobus_angolensis_palliatus
ENSMAMG00000018673	snrnp48	83	43.642	ENSCGRG00001001076	-	77	48.289	Cricetulus_griseus_chok1gshd
ENSMAMG00000018673	snrnp48	74	41.034	ENSCGRG00001008805	-	75	43.210	Cricetulus_griseus_chok1gshd
ENSMAMG00000018673	snrnp48	83	43.642	ENSCGRG00000007781	Snrnp48	77	48.289	Cricetulus_griseus_crigri
ENSMAMG00000018673	snrnp48	65	73.896	ENSCSEG00000000722	snrnp48	88	68.831	Cynoglossus_semilaevis
ENSMAMG00000018673	snrnp48	75	70.000	ENSCVAG00000019829	snrnp48	65	77.953	Cyprinodon_variegatus
ENSMAMG00000018673	snrnp48	82	54.154	ENSDARG00000039989	snrnp48	96	52.000	Danio_rerio
ENSMAMG00000018673	snrnp48	71	48.070	ENSDNOG00000014978	SNRNP48	86	42.373	Dasypus_novemcinctus
ENSMAMG00000018673	snrnp48	83	42.651	ENSDORG00000015140	Snrnp48	76	46.591	Dipodomys_ordii
ENSMAMG00000018673	snrnp48	71	47.331	ENSEASG00005012021	SNRNP48	76	47.510	Equus_asinus_asinus
ENSMAMG00000018673	snrnp48	71	47.687	ENSECAG00000026937	SNRNP48	76	47.893	Equus_caballus
ENSMAMG00000018673	snrnp48	71	31.915	ENSEEUG00000015437	SNRNP48	75	32.031	Erinaceus_europaeus
ENSMAMG00000018673	snrnp48	74	62.369	ENSELUG00000009766	snrnp48	95	55.132	Esox_lucius
ENSMAMG00000018673	snrnp48	71	47.368	ENSFCAG00000018853	SNRNP48	75	48.462	Felis_catus
ENSMAMG00000018673	snrnp48	60	53.782	ENSFALG00000007797	SNRNP48	65	56.098	Ficedula_albicollis
ENSMAMG00000018673	snrnp48	83	43.353	ENSFDAG00000009231	SNRNP48	76	47.148	Fukomys_damarensis
ENSMAMG00000018673	snrnp48	53	84.236	ENSFHEG00000014647	snrnp48	95	78.832	Fundulus_heteroclitus
ENSMAMG00000018673	snrnp48	78	62.342	ENSGMOG00000018599	-	78	70.800	Gadus_morhua
ENSMAMG00000018673	snrnp48	66	50.929	ENSGALG00000013005	SNRNP48	68	56.585	Gallus_gallus
ENSMAMG00000018673	snrnp48	83	71.560	ENSGAFG00000021639	snrnp48	95	66.972	Gambusia_affinis
ENSMAMG00000018673	snrnp48	65	78.226	ENSGACG00000017756	-	97	72.000	Gasterosteus_aculeatus
ENSMAMG00000018673	snrnp48	71	47.619	ENSGAGG00000000865	SNRNP48	66	53.922	Gopherus_agassizii
ENSMAMG00000018673	snrnp48	71	48.029	ENSGGOG00000013220	SNRNP48	76	47.909	Gorilla_gorilla
ENSMAMG00000018673	snrnp48	82	74.763	ENSHBUG00000017066	snrnp48	91	76.433	Haplochromis_burtoni
ENSMAMG00000018673	snrnp48	71	46.479	ENSHGLG00000015241	SNRNP48	76	46.923	Heterocephalus_glaber_female
ENSMAMG00000018673	snrnp48	71	46.479	ENSHGLG00100010027	SNRNP48	76	46.923	Heterocephalus_glaber_male
ENSMAMG00000018673	snrnp48	66	73.810	ENSHCOG00000014066	snrnp48	94	67.485	Hippocampus_comes
ENSMAMG00000018673	snrnp48	71	47.887	ENSSTOG00000014635	SNRNP48	76	48.289	Ictidomys_tridecemlineatus
ENSMAMG00000018673	snrnp48	73	46.667	ENSJJAG00000011495	Snrnp48	77	46.591	Jaculus_jaculus
ENSMAMG00000018673	snrnp48	83	72.755	ENSKMAG00000016514	snrnp48	95	72.981	Kryptolebias_marmoratus
ENSMAMG00000018673	snrnp48	71	76.449	ENSLBEG00000026249	snrnp48	95	76.012	Labrus_bergylta
ENSMAMG00000018673	snrnp48	79	50.633	ENSLACG00000003958	SNRNP48	75	53.101	Latimeria_chalumnae
ENSMAMG00000018673	snrnp48	74	58.741	ENSLOCG00000004187	snrnp48	94	53.774	Lepisosteus_oculatus
ENSMAMG00000018673	snrnp48	71	46.953	ENSLAFG00000011152	SNRNP48	76	47.510	Loxodonta_africana
ENSMAMG00000018673	snrnp48	71	48.029	ENSMFAG00000045216	SNRNP48	76	48.077	Macaca_fascicularis
ENSMAMG00000018673	snrnp48	71	48.029	ENSMMUG00000014785	SNRNP48	76	48.077	Macaca_mulatta
ENSMAMG00000018673	snrnp48	71	48.029	ENSMNEG00000042269	SNRNP48	76	48.077	Macaca_nemestrina
ENSMAMG00000018673	snrnp48	71	48.029	ENSMLEG00000034004	SNRNP48	76	48.077	Mandrillus_leucophaeus
ENSMAMG00000018673	snrnp48	71	48.475	ENSMGAG00000006037	SNRNP48	68	56.585	Meleagris_gallopavo
ENSMAMG00000018673	snrnp48	83	42.857	ENSMAUG00000011944	Snrnp48	75	48.235	Mesocricetus_auratus
ENSMAMG00000018673	snrnp48	71	47.872	ENSMICG00000012497	SNRNP48	76	47.925	Microcebus_murinus
ENSMAMG00000018673	snrnp48	83	43.605	ENSMOCG00000015555	Snrnp48	76	49.027	Microtus_ochrogaster
ENSMAMG00000018673	snrnp48	75	46.865	ENSMODG00000009996	SNRNP48	74	47.273	Monodelphis_domestica
ENSMAMG00000018673	snrnp48	83	77.500	ENSMALG00000005725	snrnp48	95	77.500	Monopterus_albus
ENSMAMG00000018673	snrnp48	83	43.732	MGP_CAROLIEiJ_G0018441	Snrnp48	75	49.020	Mus_caroli
ENSMAMG00000018673	snrnp48	83	43.440	ENSMUSG00000021431	Snrnp48	75	48.627	Mus_musculus
ENSMAMG00000018673	snrnp48	83	44.023	MGP_PahariEiJ_G0019509	Snrnp48	77	48.077	Mus_pahari
ENSMAMG00000018673	snrnp48	83	43.732	MGP_SPRETEiJ_G0019321	Snrnp48	75	48.627	Mus_spretus
ENSMAMG00000018673	snrnp48	82	44.282	ENSNGAG00000004849	Snrnp48	76	50.000	Nannospalax_galili
ENSMAMG00000018673	snrnp48	82	74.763	ENSNBRG00000012127	snrnp48	92	76.433	Neolamprologus_brichardi
ENSMAMG00000018673	snrnp48	71	48.029	ENSNLEG00000011667	SNRNP48	76	47.909	Nomascus_leucogenys
ENSMAMG00000018673	snrnp48	74	46.181	ENSOPRG00000015471	SNRNP48	82	46.442	Ochotona_princeps
ENSMAMG00000018673	snrnp48	82	75.710	ENSONIG00000001520	snrnp48	94	76.087	Oreochromis_niloticus
ENSMAMG00000018673	snrnp48	69	47.037	ENSOCUG00000005168	SNRNP48	85	47.692	Oryctolagus_cuniculus
ENSMAMG00000018673	snrnp48	77	76.174	ENSORLG00000015654	snrnp48	94	76.398	Oryzias_latipes
ENSMAMG00000018673	snrnp48	78	73.510	ENSORLG00020015976	snrnp48	81	74.540	Oryzias_latipes_hni
ENSMAMG00000018673	snrnp48	78	73.597	ENSORLG00015022379	snrnp48	82	74.618	Oryzias_latipes_hsok
ENSMAMG00000018673	snrnp48	82	74.051	ENSOMEG00000022007	snrnp48	94	73.832	Oryzias_melastigma
ENSMAMG00000018673	snrnp48	72	48.070	ENSOGAG00000005275	SNRNP48	79	48.485	Otolemur_garnettii
ENSMAMG00000018673	snrnp48	71	46.341	ENSOARG00000017319	SNRNP48	71	50.962	Ovis_aries
ENSMAMG00000018673	snrnp48	71	48.029	ENSPPAG00000032873	SNRNP48	76	47.909	Pan_paniscus
ENSMAMG00000018673	snrnp48	71	47.368	ENSPPRG00000004283	SNRNP48	75	48.462	Panthera_pardus
ENSMAMG00000018673	snrnp48	60	50.862	ENSPTIG00000013502	SNRNP48	71	52.657	Panthera_tigris_altaica
ENSMAMG00000018673	snrnp48	71	48.029	ENSPTRG00000017703	SNRNP48	76	47.909	Pan_troglodytes
ENSMAMG00000018673	snrnp48	71	48.029	ENSPANG00000000771	SNRNP48	76	48.077	Papio_anubis
ENSMAMG00000018673	snrnp48	62	65.272	ENSPKIG00000013703	snrnp48	52	65.306	Paramormyrops_kingsleyae
ENSMAMG00000018673	snrnp48	72	46.309	ENSPSIG00000002213	SNRNP48	64	54.106	Pelodiscus_sinensis
ENSMAMG00000018673	snrnp48	67	66.794	ENSPMGG00000008120	snrnp48	93	66.794	Periophthalmus_magnuspinnatus
ENSMAMG00000018673	snrnp48	83	44.315	ENSPEMG00000008872	Snrnp48	77	48.846	Peromyscus_maniculatus_bairdii
ENSMAMG00000018673	snrnp48	83	72.477	ENSPFOG00000003578	snrnp48	95	67.890	Poecilia_formosa
ENSMAMG00000018673	snrnp48	62	76.793	ENSPLAG00000002290	snrnp48	82	76.793	Poecilia_latipinna
ENSMAMG00000018673	snrnp48	83	72.783	ENSPMEG00000018033	snrnp48	95	68.196	Poecilia_mexicana
ENSMAMG00000018673	snrnp48	66	77.165	ENSPREG00000018541	snrnp48	95	67.890	Poecilia_reticulata
ENSMAMG00000018673	snrnp48	71	48.387	ENSPPYG00000016209	SNRNP48	76	48.462	Pongo_abelii
ENSMAMG00000018673	snrnp48	63	35.573	ENSPCAG00000011991	SNRNP48	98	35.821	Procavia_capensis
ENSMAMG00000018673	snrnp48	71	47.143	ENSPVAG00000002854	SNRNP48	76	47.490	Pteropus_vampyrus
ENSMAMG00000018673	snrnp48	80	75.321	ENSPNYG00000015399	snrnp48	97	76.974	Pundamilia_nyererei
ENSMAMG00000018673	snrnp48	83	44.315	ENSRNOG00000013756	Snrnp48	77	48.669	Rattus_norvegicus
ENSMAMG00000018673	snrnp48	71	48.029	ENSRBIG00000043856	SNRNP48	82	48.077	Rhinopithecus_bieti
ENSMAMG00000018673	snrnp48	71	48.029	ENSRROG00000043229	SNRNP48	76	48.077	Rhinopithecus_roxellana
ENSMAMG00000018673	snrnp48	71	48.387	ENSSBOG00000019486	SNRNP48	76	48.289	Saimiri_boliviensis_boliviensis
ENSMAMG00000018673	snrnp48	71	47.945	ENSSHAG00000014483	SNRNP48	75	48.106	Sarcophilus_harrisii
ENSMAMG00000018673	snrnp48	64	61.660	ENSSFOG00015006610	snrnp48	65	60.145	Scleropages_formosus
ENSMAMG00000018673	snrnp48	83	77.116	ENSSDUG00000014953	snrnp48	95	76.875	Seriola_dumerili
ENSMAMG00000018673	snrnp48	83	76.803	ENSSLDG00000005989	snrnp48	93	78.205	Seriola_lalandi_dorsalis
ENSMAMG00000018673	snrnp48	71	47.635	ENSSPUG00000006257	SNRNP48	57	54.412	Sphenodon_punctatus
ENSMAMG00000018673	snrnp48	83	77.640	ENSSPAG00000006454	snrnp48	95	77.640	Stegastes_partitus
ENSMAMG00000018673	snrnp48	72	46.801	ENSTGUG00000007575	SNRNP48	65	55.610	Taeniopygia_guttata
ENSMAMG00000018673	snrnp48	66	74.118	ENSTRUG00000007031	snrnp48	94	69.969	Takifugu_rubripes
ENSMAMG00000018673	snrnp48	86	65.060	ENSTNIG00000012977	-	92	66.352	Tetraodon_nigroviridis
ENSMAMG00000018673	snrnp48	66	46.947	ENSTBEG00000015620	SNRNP48	77	46.947	Tupaia_belangeri
ENSMAMG00000018673	snrnp48	69	48.519	ENSTTRG00000016715	SNRNP48	76	48.462	Tursiops_truncatus
ENSMAMG00000018673	snrnp48	83	44.478	ENSUAMG00000003690	SNRNP48	76	47.104	Ursus_americanus
ENSMAMG00000018673	snrnp48	60	50.431	ENSVPAG00000003557	SNRNP48	72	51.659	Vicugna_pacos
ENSMAMG00000018673	snrnp48	82	44.379	ENSVVUG00000004996	SNRNP48	75	47.674	Vulpes_vulpes
ENSMAMG00000018673	snrnp48	75	46.622	ENSXETG00000020447	snrnp48	71	51.037	Xenopus_tropicalis
ENSMAMG00000018673	snrnp48	62	76.050	ENSXCOG00000004478	snrnp48	95	65.231	Xiphophorus_couchianus
ENSMAMG00000018673	snrnp48	83	72.256	ENSXMAG00000013595	snrnp48	95	71.037	Xiphophorus_maculatus