EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000018733 (Gene tree)
Gene ID: 113134352
Gene Symbol: smg7
Alias: fa99h10|wu:fa99h10
Full Name: SMG7 nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 17399 bases
Position: chrOOHQ01000035.1:24438870-24456268
Accession: ZDB-GENE-030131-9122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000027929	EST1	PF10374.9	8.7e-27	1	1
ENSMAMP00000027939	EST1	PF10374.9	1.9e-26	1	1
ENSMAMP00000027954	EST1	PF10374.9	5.7e-26	1	1
ENSMAMP00000027954	EST1_DNA_bind	PF10373.9	5.1e-49	1	1
ENSMAMP00000027939	EST1_DNA_bind	PF10373.9	5.5e-49	1	1
ENSMAMP00000027929	EST1_DNA_bind	PF10373.9	6.1e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000028650	-	8741	-	ENSMAMP00000027929	1231 (aa)	-	-
ENSMAMT00000028660	-	8591	-	ENSMAMP00000027939	1181 (aa)	-	-
ENSMAMT00000028676	-	5106	-	ENSMAMP00000027954	1152 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000018733's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000018733's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000018733	smg7	85	65.377	ENSG00000116698	SMG7	88	92.547	Homo_sapiens
ENSMAMG00000018733	smg7	74	92.113	ENSAPOG00000009611	smg7	83	92.113	Acanthochromis_polyacanthus
ENSMAMG00000018733	smg7	85	64.460	ENSAMEG00000002357	SMG7	88	63.480	Ailuropoda_melanoleuca
ENSMAMG00000018733	smg7	82	82.341	ENSACIG00000015152	smg7	87	82.546	Amphilophus_citrinellus
ENSMAMG00000018733	smg7	86	90.405	ENSAOCG00000013538	smg7	88	90.781	Amphiprion_ocellaris
ENSMAMG00000018733	smg7	86	90.414	ENSAPEG00000007851	smg7	88	90.789	Amphiprion_percula
ENSMAMG00000018733	smg7	85	90.891	ENSATEG00000006931	smg7	88	90.594	Anabas_testudineus
ENSMAMG00000018733	smg7	85	63.803	ENSAPLG00000015811	SMG7	87	64.654	Anas_platyrhynchos
ENSMAMG00000018733	smg7	86	63.904	ENSACAG00000014989	SMG7	88	63.453	Anolis_carolinensis
ENSMAMG00000018733	smg7	85	65.463	ENSANAG00000028114	SMG7	85	92.357	Aotus_nancymaae
ENSMAMG00000018733	smg7	86	87.288	ENSACLG00000022079	smg7	88	86.535	Astatotilapia_calliptera
ENSMAMG00000018733	smg7	86	75.564	ENSAMXG00000020809	smg7	88	75.823	Astyanax_mexicanus
ENSMAMG00000018733	smg7	84	67.797	ENSBTAG00000008003	SMG7	88	65.340	Bos_taurus
ENSMAMG00000018733	smg7	85	65.205	ENSCJAG00000005135	SMG7	86	92.357	Callithrix_jacchus
ENSMAMG00000018733	smg7	84	64.561	ENSCAFG00000013276	SMG7	85	63.246	Canis_familiaris
ENSMAMG00000018733	smg7	86	64.332	ENSCAFG00020015475	SMG7	89	89.634	Canis_lupus_dingo
ENSMAMG00000018733	smg7	85	67.797	ENSCHIG00000018192	SMG7	88	63.796	Capra_hircus
ENSMAMG00000018733	smg7	85	65.280	ENSTSYG00000002667	SMG7	80	93.548	Carlito_syrichta
ENSMAMG00000018733	smg7	84	66.102	ENSCPOG00000008906	SMG7	87	62.419	Cavia_porcellus
ENSMAMG00000018733	smg7	85	65.631	ENSCCAG00000028596	SMG7	85	92.357	Cebus_capucinus
ENSMAMG00000018733	smg7	85	65.571	ENSCATG00000011063	SMG7	85	92.357	Cercocebus_atys
ENSMAMG00000018733	smg7	85	65.437	ENSCLAG00000010751	SMG7	88	65.344	Chinchilla_lanigera
ENSMAMG00000018733	smg7	84	66.102	ENSCSAG00000012654	SMG7	85	64.000	Chlorocebus_sabaeus
ENSMAMG00000018733	smg7	78	66.102	ENSCHOG00000010522	SMG7	76	66.102	Choloepus_hoffmanni
ENSMAMG00000018733	smg7	86	65.593	ENSCPBG00000015724	SMG7	88	65.409	Chrysemys_picta_bellii
ENSMAMG00000018733	smg7	84	65.437	ENSCANG00000015680	SMG7	85	92.357	Colobus_angolensis_palliatus
ENSMAMG00000018733	smg7	85	64.860	ENSCGRG00001013705	Smg7	88	64.100	Cricetulus_griseus_chok1gshd
ENSMAMG00000018733	smg7	84	64.689	ENSCGRG00000018401	Smg7	88	64.917	Cricetulus_griseus_crigri
ENSMAMG00000018733	smg7	84	81.120	ENSCVAG00000011842	smg7	88	80.835	Cyprinodon_variegatus
ENSMAMG00000018733	smg7	63	84.478	ENSDARG00000060767	smg7	88	76.249	Danio_rerio
ENSMAMG00000018733	smg7	84	64.750	ENSDORG00000007331	Smg7	88	63.417	Dipodomys_ordii
ENSMAMG00000018733	smg7	84	66.102	ENSETEG00000002654	SMG7	90	63.822	Echinops_telfairi
ENSMAMG00000018733	smg7	84	65.352	ENSEASG00005006524	SMG7	88	64.657	Equus_asinus_asinus
ENSMAMG00000018733	smg7	79	89.362	ENSECAG00000004313	SMG7	84	89.124	Equus_caballus
ENSMAMG00000018733	smg7	84	66.102	ENSEEUG00000002024	SMG7	85	63.755	Erinaceus_europaeus
ENSMAMG00000018733	smg7	86	77.705	ENSELUG00000010293	smg7	90	77.260	Esox_lucius
ENSMAMG00000018733	smg7	84	64.955	ENSFCAG00000010900	SMG7	87	64.794	Felis_catus
ENSMAMG00000018733	smg7	84	62.172	ENSFALG00000003047	SMG7	61	73.466	Ficedula_albicollis
ENSMAMG00000018733	smg7	84	65.208	ENSFDAG00000012121	SMG7	87	63.722	Fukomys_damarensis
ENSMAMG00000018733	smg7	85	81.836	ENSFHEG00000011073	smg7	88	81.145	Fundulus_heteroclitus
ENSMAMG00000018733	smg7	78	80.263	ENSGMOG00000004916	smg7	82	80.263	Gadus_morhua
ENSMAMG00000018733	smg7	85	63.830	ENSGALG00000004667	SMG7	88	64.729	Gallus_gallus
ENSMAMG00000018733	smg7	85	80.020	ENSGAFG00000019000	smg7	88	79.447	Gambusia_affinis
ENSMAMG00000018733	smg7	85	80.652	ENSGACG00000001634	smg7	89	79.744	Gasterosteus_aculeatus
ENSMAMG00000018733	smg7	84	67.797	ENSGGOG00000002342	SMG7	82	91.824	Gorilla_gorilla
ENSMAMG00000018733	smg7	86	87.288	ENSHBUG00000003726	smg7	90	86.629	Haplochromis_burtoni
ENSMAMG00000018733	smg7	85	65.861	ENSHGLG00000009353	SMG7	88	65.634	Heterocephalus_glaber_female
ENSMAMG00000018733	smg7	85	65.764	ENSHGLG00100009637	-	88	65.537	Heterocephalus_glaber_male
ENSMAMG00000018733	smg7	85	58.026	ENSHGLG00100004878	-	87	57.841	Heterocephalus_glaber_male
ENSMAMG00000018733	smg7	86	74.812	ENSIPUG00000016997	smg7	88	75.000	Ictalurus_punctatus
ENSMAMG00000018733	smg7	84	66.102	ENSSTOG00000000401	SMG7	88	64.558	Ictidomys_tridecemlineatus
ENSMAMG00000018733	smg7	84	64.813	ENSJJAG00000012351	Smg7	88	64.060	Jaculus_jaculus
ENSMAMG00000018733	smg7	82	79.918	ENSKMAG00000004900	smg7	86	83.871	Kryptolebias_marmoratus
ENSMAMG00000018733	smg7	85	86.053	ENSLBEG00000002983	smg7	87	86.053	Labrus_bergylta
ENSMAMG00000018733	smg7	51	79.195	ENSLBEG00000005220	-	75	79.195	Labrus_bergylta
ENSMAMG00000018733	smg7	86	66.605	ENSLACG00000000972	SMG7	81	74.576	Latimeria_chalumnae
ENSMAMG00000018733	smg7	85	69.501	ENSLOCG00000002010	smg7	88	69.593	Lepisosteus_oculatus
ENSMAMG00000018733	smg7	84	66.102	ENSLAFG00000008186	SMG7	87	63.966	Loxodonta_africana
ENSMAMG00000018733	smg7	84	66.102	ENSMFAG00000031653	SMG7	85	92.357	Macaca_fascicularis
ENSMAMG00000018733	smg7	84	66.102	ENSMMUG00000018458	SMG7	88	64.352	Macaca_mulatta
ENSMAMG00000018733	smg7	85	65.571	ENSMNEG00000034798	SMG7	85	92.357	Macaca_nemestrina
ENSMAMG00000018733	smg7	85	65.571	ENSMLEG00000037170	SMG7	88	65.344	Mandrillus_leucophaeus
ENSMAMG00000018733	smg7	86	87.665	ENSMZEG00005015247	smg7	88	86.441	Maylandia_zebra
ENSMAMG00000018733	smg7	84	63.716	ENSMGAG00000001561	SMG7	87	64.175	Meleagris_gallopavo
ENSMAMG00000018733	smg7	85	64.569	ENSMAUG00000019484	Smg7	88	63.915	Mesocricetus_auratus
ENSMAMG00000018733	smg7	84	66.844	ENSMICG00000007145	SMG7	82	92.357	Microcebus_murinus
ENSMAMG00000018733	smg7	85	64.507	ENSMOCG00000020748	Smg7	88	64.376	Microtus_ochrogaster
ENSMAMG00000018733	smg7	85	82.382	ENSMMOG00000001524	smg7	86	83.909	Mola_mola
ENSMAMG00000018733	smg7	85	64.023	ENSMODG00000007139	SMG7	95	64.217	Monodelphis_domestica
ENSMAMG00000018733	smg7	86	87.996	ENSMALG00000000061	smg7	82	89.036	Monopterus_albus
ENSMAMG00000018733	smg7	85	65.504	MGP_CAROLIEiJ_G0014704	Smg7	88	64.465	Mus_caroli
ENSMAMG00000018733	smg7	85	64.922	ENSMUSG00000042772	Smg7	88	64.286	Mus_musculus
ENSMAMG00000018733	smg7	85	64.922	MGP_PahariEiJ_G0027940	Smg7	88	65.247	Mus_pahari
ENSMAMG00000018733	smg7	85	65.019	MGP_SPRETEiJ_G0015511	Smg7	88	64.378	Mus_spretus
ENSMAMG00000018733	smg7	83	64.407	ENSMPUG00000011732	SMG7	85	62.970	Mustela_putorius_furo
ENSMAMG00000018733	smg7	85	63.713	ENSMLUG00000015417	SMG7	87	63.569	Myotis_lucifugus
ENSMAMG00000018733	smg7	85	64.417	ENSNGAG00000009836	Smg7	88	63.969	Nannospalax_galili
ENSMAMG00000018733	smg7	83	79.919	ENSNBRG00000024343	smg7	87	79.213	Neolamprologus_brichardi
ENSMAMG00000018733	smg7	85	65.571	ENSNLEG00000018018	SMG7	88	65.377	Nomascus_leucogenys
ENSMAMG00000018733	smg7	69	65.341	ENSMEUG00000004681	SMG7	73	65.341	Notamacropus_eugenii
ENSMAMG00000018733	smg7	85	59.755	ENSOPRG00000013942	SMG7	87	59.378	Ochotona_princeps
ENSMAMG00000018733	smg7	85	65.377	ENSODEG00000010390	SMG7	88	65.150	Octodon_degus
ENSMAMG00000018733	smg7	85	87.253	ENSONIG00000000277	smg7	88	86.561	Oreochromis_niloticus
ENSMAMG00000018733	smg7	84	62.465	ENSOANG00000000994	SMG7	88	62.312	Ornithorhynchus_anatinus
ENSMAMG00000018733	smg7	85	61.825	ENSOCUG00000005887	SMG7	81	61.953	Oryctolagus_cuniculus
ENSMAMG00000018733	smg7	86	78.125	ENSORLG00000007314	smg7	70	97.351	Oryzias_latipes
ENSMAMG00000018733	smg7	86	78.409	ENSORLG00020015779	smg7	69	98.013	Oryzias_latipes_hni
ENSMAMG00000018733	smg7	86	79.640	ENSORLG00015012289	smg7	88	78.808	Oryzias_latipes_hsok
ENSMAMG00000018733	smg7	86	79.451	ENSOMEG00000002328	smg7	88	78.713	Oryzias_melastigma
ENSMAMG00000018733	smg7	85	63.349	ENSOGAG00000003107	SMG7	85	63.070	Otolemur_garnettii
ENSMAMG00000018733	smg7	84	66.102	ENSOARG00000001352	SMG7	87	63.968	Ovis_aries
ENSMAMG00000018733	smg7	85	65.571	ENSPPAG00000031619	SMG7	89	90.184	Pan_paniscus
ENSMAMG00000018733	smg7	85	64.951	ENSPPRG00000011222	SMG7	88	64.763	Panthera_pardus
ENSMAMG00000018733	smg7	84	64.407	ENSPTIG00000007242	SMG7	88	63.767	Panthera_tigris_altaica
ENSMAMG00000018733	smg7	85	65.571	ENSPTRG00000001764	SMG7	85	92.357	Pan_troglodytes
ENSMAMG00000018733	smg7	85	65.571	ENSPANG00000004520	SMG7	88	65.344	Papio_anubis
ENSMAMG00000018733	smg7	86	71.201	ENSPKIG00000007242	smg7	89	71.388	Paramormyrops_kingsleyae
ENSMAMG00000018733	smg7	86	62.960	ENSPSIG00000012201	SMG7	88	64.643	Pelodiscus_sinensis
ENSMAMG00000018733	smg7	53	68.966	ENSPMGG00000021833	smg7	79	68.966	Periophthalmus_magnuspinnatus
ENSMAMG00000018733	smg7	86	62.767	ENSPEMG00000011315	Smg7	88	64.000	Peromyscus_maniculatus_bairdii
ENSMAMG00000018733	smg7	84	66.132	ENSPCIG00000003786	SMG7	89	93.125	Phascolarctos_cinereus
ENSMAMG00000018733	smg7	86	81.604	ENSPFOG00000019219	smg7	88	80.961	Poecilia_formosa
ENSMAMG00000018733	smg7	85	81.683	ENSPLAG00000001446	smg7	88	81.108	Poecilia_latipinna
ENSMAMG00000018733	smg7	85	81.683	ENSPMEG00000005218	smg7	90	81.009	Poecilia_mexicana
ENSMAMG00000018733	smg7	85	77.609	ENSPREG00000019039	smg7	92	77.062	Poecilia_reticulata
ENSMAMG00000018733	smg7	85	65.571	ENSPPYG00000000427	SMG7	88	65.344	Pongo_abelii
ENSMAMG00000018733	smg7	73	72.807	ENSPCAG00000008360	SMG7	78	72.807	Procavia_capensis
ENSMAMG00000018733	smg7	84	66.102	ENSPCOG00000011996	SMG7	77	92.357	Propithecus_coquereli
ENSMAMG00000018733	smg7	82	64.407	ENSPVAG00000000851	SMG7	85	59.442	Pteropus_vampyrus
ENSMAMG00000018733	smg7	86	87.370	ENSPNYG00000007643	smg7	88	86.805	Pundamilia_nyererei
ENSMAMG00000018733	smg7	86	76.244	ENSPNAG00000011374	smg7	88	76.720	Pygocentrus_nattereri
ENSMAMG00000018733	smg7	85	65.150	ENSRNOG00000027962	Smg7	98	66.912	Rattus_norvegicus
ENSMAMG00000018733	smg7	85	65.571	ENSRBIG00000036316	SMG7	88	65.344	Rhinopithecus_bieti
ENSMAMG00000018733	smg7	85	65.571	ENSRROG00000035719	SMG7	88	65.344	Rhinopithecus_roxellana
ENSMAMG00000018733	smg7	85	63.959	ENSSBOG00000023454	SMG7	88	92.547	Saimiri_boliviensis_boliviensis
ENSMAMG00000018733	smg7	85	65.209	ENSSHAG00000013147	SMG7	87	65.340	Sarcophilus_harrisii
ENSMAMG00000018733	smg7	86	74.088	ENSSFOG00015017252	smg7	88	73.551	Scleropages_formosus
ENSMAMG00000018733	smg7	86	84.011	ENSSMAG00000006067	smg7	88	83.648	Scophthalmus_maximus
ENSMAMG00000018733	smg7	85	91.617	ENSSDUG00000017543	smg7	88	90.828	Seriola_dumerili
ENSMAMG00000018733	smg7	84	63.785	ENSSPUG00000002064	SMG7	87	64.217	Sphenodon_punctatus
ENSMAMG00000018733	smg7	85	86.296	ENSSPAG00000008733	smg7	87	84.455	Stegastes_partitus
ENSMAMG00000018733	smg7	84	65.171	ENSSSCG00000015558	SMG7	88	63.822	Sus_scrofa
ENSMAMG00000018733	smg7	84	63.851	ENSTGUG00000003928	SMG7	88	64.752	Taeniopygia_guttata
ENSMAMG00000018733	smg7	86	73.284	ENSTNIG00000002802	smg7	88	72.171	Tetraodon_nigroviridis
ENSMAMG00000018733	smg7	68	67.429	ENSTBEG00000003220	SMG7	66	67.429	Tupaia_belangeri
ENSMAMG00000018733	smg7	84	66.102	ENSTTRG00000014778	SMG7	85	63.780	Tursiops_truncatus
ENSMAMG00000018733	smg7	82	62.348	ENSUAMG00000017473	SMG7	87	62.260	Ursus_americanus
ENSMAMG00000018733	smg7	81	64.407	ENSUMAG00000016389	SMG7	88	62.344	Ursus_maritimus
ENSMAMG00000018733	smg7	84	64.552	ENSVVUG00000008976	SMG7	87	64.468	Vulpes_vulpes
ENSMAMG00000018733	smg7	85	59.302	ENSXETG00000012528	smg7	87	59.113	Xenopus_tropicalis
ENSMAMG00000018733	smg7	85	81.089	ENSXMAG00000007123	smg7	88	80.514	Xiphophorus_maculatus